RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 RBM23Q86U06 439 aaKnown RBP21.54■■□□□ 1.04
CDPF1-202ENST00000381037 RIN2Q8WYP3 895 aaPredicted RBP21.54■■□□□ 1.04
CDPF1-202ENST00000381037 KLHL5Q96PQ7 755 aa21.54■■□□□ 1.04
CDPF1-202ENST00000381037 EPB41P11171 864 aaKnown RBP21.53■■□□□ 1.04
CDPF1-202ENST00000381037 ERCC5P28715 1186 aaPredicted RBP21.53■■□□□ 1.04
CDPF1-202ENST00000381037 TAF6P49848 677 aa21.53■■□□□ 1.04
CDPF1-202ENST00000381037 ZACNQ401N2 412 aa21.53■■□□□ 1.04
CDPF1-202ENST00000381037 CT47A1Q5JQC4 288 aaPredicted RBP21.53■■□□□ 1.04
CDPF1-202ENST00000381037 TDRD10Q5VZ19 366 aaKnown RBP21.53■■□□□ 1.04
CDPF1-202ENST00000381037 PRSS55Q6UWB4 352 aaPredicted RBP21.53■■□□□ 1.04
CDPF1-202ENST00000381037 CEP57Q86XR8 500 aa21.53■■□□□ 1.04
CDPF1-202ENST00000381037 PPM1EQ8WY54 764 aa21.53■■□□□ 1.04
CDPF1-202ENST00000381037 PPP2R3CQ969Q6 453 aa21.53■■□□□ 1.04
CDPF1-202ENST00000381037 FNIP2Q9P278 1114 aa21.53■■□□□ 1.04
CDPF1-202ENST00000381037 PCDHB8Q9UN66 801 aa21.53■■□□□ 1.04
CDPF1-202ENST00000381037 TEX28O15482 410 aa21.52■■□□□ 1.04
CDPF1-202ENST00000381037 TBC1D4O60343 1298 aa21.52■■□□□ 1.04
CDPF1-202ENST00000381037 PNPLA4P41247 253 aa21.52■■□□□ 1.04
CDPF1-202ENST00000381037 PPP3CAQ08209 521 aa21.52■■□□□ 1.04
CDPF1-202ENST00000381037 SV2AQ7L0J3 742 aa21.52■■□□□ 1.04
CDPF1-202ENST00000381037 VN1R2Q8NFZ6 395 aa21.52■■□□□ 1.04
CDPF1-202ENST00000381037 SENP8Q96LD8 212 aa21.52■■□□□ 1.04
CDPF1-202ENST00000381037 CDCA3Q99618 268 aaPredicted RBP21.52■■□□□ 1.04
CDPF1-202ENST00000381037 CLSTN3Q9BQT9 956 aa21.52■■□□□ 1.04
CDPF1-202ENST00000381037 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.52■■□□□ 1.04
CDPF1-202ENST00000381037 KPNA7A9QM74 516 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 CLASP2O75122 1294 aaKnown RBP21.51■■□□□ 1.03
CDPF1-202ENST00000381037 TRIM49P0CI25 452 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 TRIM49CP0CI26 452 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 KRT13P13646 458 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 ADAM15Q13444 863 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 VARS2Q5ST30 1063 aaKnown RBP21.51■■□□□ 1.03
CDPF1-202ENST00000381037 RSPO2Q6UXX9 243 aaPredicted RBP21.51■■□□□ 1.03
CDPF1-202ENST00000381037 USP37Q86T82 979 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 EFHBQ8N7U6 833 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 SRRTQ9BXP5 876 aaKnown RBP21.51■■□□□ 1.03
CDPF1-202ENST00000381037 XYLT2Q9H1B5 865 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 GDAP2Q9NXN4 497 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 MTRRQ9UBK8 725 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.51■■□□□ 1.03
CDPF1-202ENST00000381037 LINC01565O15544 149 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 OAZ2O95190 189 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 VNN1O95497 513 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 GLP2RO95838 553 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 CYP11A1P05108 521 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 KRT19P08727 400 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 LTBRP36941 435 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 MARSP56192 900 aaKnown RBP21.51■■□□□ 1.03
CDPF1-202ENST00000381037 SV2CQ496J9 727 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 PDXDC1Q6P996 788 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 TMEM184AQ6ZMB5 413 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 FRMD5Q7Z6J6 570 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 PABPC5Q96DU9 382 aaKnown RBP21.51■■□□□ 1.03
CDPF1-202ENST00000381037 ZNF560Q96MR9 790 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 ARMCX3Q9UH62 379 aaPredicted RBP21.51■■□□□ 1.03
CDPF1-202ENST00000381037 DACH1Q9UI36 760 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 BACE2Q9Y5Z0 518 aa21.51■■□□□ 1.03
CDPF1-202ENST00000381037 UNC80Q8N2C7 3258 aa21.5■■□□□ 1.03
CDPF1-202ENST00000381037 NCK2O43639 380 aa21.5■■□□□ 1.03
CDPF1-202ENST00000381037 STAU1O95793 577 aaKnown RBP21.5■■□□□ 1.03
CDPF1-202ENST00000381037 RPL17P18621 184 aaKnown RBP21.5■■□□□ 1.03
CDPF1-202ENST00000381037 TYMPP19971 482 aa21.5■■□□□ 1.03
CDPF1-202ENST00000381037 RBM10P98175 930 aaKnown RBP21.5■■□□□ 1.03
CDPF1-202ENST00000381037 PSMD5Q16401 504 aa21.5■■□□□ 1.03
CDPF1-202ENST00000381037 DSTYKQ6XUX3 929 aa21.5■■□□□ 1.03
CDPF1-202ENST00000381037 ANKS3Q6ZW76 656 aa21.5■■□□□ 1.03
CDPF1-202ENST00000381037 LIMS2Q7Z4I7 341 aa21.5■■□□□ 1.03
CDPF1-202ENST00000381037 IRF2BP1Q8IU81 584 aa21.5■■□□□ 1.03
CDPF1-202ENST00000381037 APPL2Q8NEU8 664 aa21.5■■□□□ 1.03
CDPF1-202ENST00000381037 SLC22A17Q8WUG5 538 aa21.5■■□□□ 1.03
CDPF1-202ENST00000381037 SLC35C1Q96A29 364 aa21.5■■□□□ 1.03
CDPF1-202ENST00000381037 HPDLQ96IR7 371 aa21.5■■□□□ 1.03
CDPF1-202ENST00000381037 EMILIN2Q9BXX0 1053 aa21.5■■□□□ 1.03
CDPF1-202ENST00000381037 IGFLR1Q9H665 355 aa21.5■■□□□ 1.03
CDPF1-202ENST00000381037 TIMM13Q9Y5L4 95 aaPredicted RBP21.5■■□□□ 1.03
CDPF1-202ENST00000381037 HCFC2Q9Y5Z7 792 aa21.5■■□□□ 1.03
CDPF1-202ENST00000381037 ADAM12O43184 909 aa21.49■■□□□ 1.03
CDPF1-202ENST00000381037 GTF2H1P32780 548 aa21.49■■□□□ 1.03
CDPF1-202ENST00000381037 CA8P35219 290 aa21.49■■□□□ 1.03
CDPF1-202ENST00000381037 GCLMP48507 274 aa21.49■■□□□ 1.03
CDPF1-202ENST00000381037 SASS6Q6UVJ0 657 aa21.49■■□□□ 1.03
CDPF1-202ENST00000381037 SYAP1Q96A49 352 aaPredicted RBP21.49■■□□□ 1.03
CDPF1-202ENST00000381037 VRTNQ9H8Y1 702 aa21.49■■□□□ 1.03
CDPF1-202ENST00000381037 METTL14Q9HCE5 456 aaKnown RBP21.49■■□□□ 1.03
CDPF1-202ENST00000381037 FSD2A1L4K1 749 aa21.48■■□□□ 1.03
CDPF1-202ENST00000381037 CYB561D2O14569 222 aa21.48■■□□□ 1.03
CDPF1-202ENST00000381037 C1RP00736 705 aa21.48■■□□□ 1.03
CDPF1-202ENST00000381037 ODC1P11926 461 aa21.48■■□□□ 1.03
CDPF1-202ENST00000381037 NDUFV1P49821 464 aa21.48■■□□□ 1.03
CDPF1-202ENST00000381037 CLCN4P51793 760 aa21.48■■□□□ 1.03
CDPF1-202ENST00000381037 MYL6P60660 151 aa21.48■■□□□ 1.03
CDPF1-202ENST00000381037 CREMQ03060 361 aa21.48■■□□□ 1.03
CDPF1-202ENST00000381037 DLX2Q07687 328 aaPredicted RBP21.48■■□□□ 1.03
CDPF1-202ENST00000381037 SLC8B1Q6J4K2 584 aa21.48■■□□□ 1.03
CDPF1-202ENST00000381037 LILRA6Q6PI73 481 aa21.48■■□□□ 1.03
CDPF1-202ENST00000381037 PRDM6Q9NQX0 595 aa21.48■■□□□ 1.03
CDPF1-202ENST00000381037 ANO10Q9NW15 660 aa21.48■■□□□ 1.03
CDPF1-202ENST00000381037 GNA14O95837 355 aa21.47■■□□□ 1.03
CDPF1-202ENST00000381037 ADH1AP07327 375 aa21.47■■□□□ 1.03
CDPF1-202ENST00000381037 KLRC2P26717 231 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms