RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 GPS1Q13098 491 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 NCOA4Q13772 614 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 TCHHL1Q5QJ38 904 aaPredicted RBP11.52□□□□□ -0.57
USP6NL-202ENST00000379237 ITPRIPL1Q6GPH6 555 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 SMYD1Q8NB12 490 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 ART4Q93070 314 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 CYLDQ9NQC7 956 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 GRHL1Q9NZI5 618 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 TAGLN3Q9UI15 199 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 CCPG1Q9ULG6 757 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 PCDH11YQ9BZA8 1340 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 DLC1Q96QB1 1528 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 ANKRD26Q9UPS8 1709 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 HTR3EA5X5Y0 456 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 SEC24DO94855 1032 aaPredicted RBP11.52□□□□□ -0.57
USP6NL-202ENST00000379237 HMOX2P30519 316 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 WDR4P57081 412 aaKnown RBP11.52□□□□□ -0.57
USP6NL-202ENST00000379237 NADK2Q4G0N4 442 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 PDCD4Q53EL6 469 aaKnown RBP11.52□□□□□ -0.57
USP6NL-202ENST00000379237 PPP4R3CPQ6ZMV5 832 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 RAPH1Q70E73 1250 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 CLVS1Q8IUQ0 354 aaPredicted RBP11.52□□□□□ -0.57
USP6NL-202ENST00000379237 VPS50Q96JG6 964 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 BTBD6Q96KE9 485 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 COX4I2Q96KJ9 171 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 SLC13A1Q9BZW2 595 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 ANAPC7Q9UJX3 599 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 AGTPBP1Q9UPW5 1226 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 BCS1LQ9Y276 419 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 GPC6Q9Y625 555 aaPredicted RBP11.52□□□□□ -0.57
USP6NL-202ENST00000379237 MAD1L1Q9Y6D9 718 aa11.52□□□□□ -0.57
USP6NL-202ENST00000379237 IQANK1A0A1B0GTG1 560 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 ECE2O60344 883 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 ANXA13P27216 316 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 MARCKSL1P49006 195 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 UBAP2Q5T6F2 1119 aaKnown RBP11.51□□□□□ -0.57
USP6NL-202ENST00000379237 MRPL46Q9H2W6 279 aaKnown RBP11.51□□□□□ -0.57
USP6NL-202ENST00000379237 DKK3Q9UBP4 350 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 RSL24D1Q9UHA3 163 aaKnown RBP11.51□□□□□ -0.57
USP6NL-202ENST00000379237 COQ6Q9Y2Z9 468 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 CAPN8A6NHC0 703 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 BGNP21810 368 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 ADCY7P51828 1080 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 OTUD4Q01804 1114 aaKnown RBP11.51□□□□□ -0.57
USP6NL-202ENST00000379237 TROAPQ12815 778 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 KLHL35Q6PF15 583 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 RSPH1Q8WYR4 309 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 DDX17Q92841 729 aaKnown RBP11.51□□□□□ -0.57
USP6NL-202ENST00000379237 EME1Q96AY2 570 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 SERPINI1Q99574 410 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 ZNF287Q9HBT7 754 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 KRT82Q9NSB4 513 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 SLAIN2Q9P270 581 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 JAG2Q9Y219 1238 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 KDM3AQ9Y4C1 1321 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 ANKRD63C9JTQ0 380 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 NOL4O94818 638 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 PSMC2P35998 433 aaKnown RBP11.51□□□□□ -0.57
USP6NL-202ENST00000379237 ADRM1Q16186 407 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 CCDC153Q494R4 210 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 PCNX4Q63HM2 1172 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 LRRC55Q6ZSA7 311 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 TCP10LQ8TDR4 215 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 ARHGEF26Q96DR7 871 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 CCDC138Q96M89 665 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 BHMT2Q9H2M3 363 aa11.51□□□□□ -0.57
USP6NL-202ENST00000379237 BTNL10A8MVZ5 291 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 POTECB2RU33 542 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 PEX1O43933 1283 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 NR3C1P04150 777 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 PORP16435 677 aaPredicted RBP11.5□□□□□ -0.57
USP6NL-202ENST00000379237 PSMC3P17980 439 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 EEF1B2P24534 225 aaKnown RBP11.5□□□□□ -0.57
USP6NL-202ENST00000379237 PEX2P28328 305 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 PPARGP37231 505 aaPredicted RBP11.5□□□□□ -0.57
USP6NL-202ENST00000379237 NR1H2P55055 460 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 GPR141Q7Z602 305 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 SAPCD2Q86UD0 394 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 TREML1Q86YW5 311 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 NUDCD3Q8IVD9 361 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 C10orf82Q8WW14 230 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 TRPC7Q9HCX4 862 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 MEIS1O00470 390 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 FAM163BP0C2L3 166 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 VEGFAP15692 232 aaPredicted RBP11.5□□□□□ -0.57
USP6NL-202ENST00000379237 DLG1Q12959 904 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.5□□□□□ -0.57
USP6NL-202ENST00000379237 CATSPER1Q8NEC5 780 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 ZCRB1Q8TBF4 217 aaKnown RBP11.5□□□□□ -0.57
USP6NL-202ENST00000379237 MIPEPQ99797 713 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 PCYOX1Q9UHG3 505 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 DDX25Q9UHL0 483 aaKnown RBP11.5□□□□□ -0.57
USP6NL-202ENST00000379237 PPM1HQ9ULR3 514 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 CLEC11AQ9Y240 323 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 LMTK2Q8IWU2 1503 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 MAP4P27816 1152 aaKnown RBP11.5□□□□□ -0.57
USP6NL-202ENST00000379237 ARL4CP56559 192 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 SLC1A5Q15758 541 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 PACS1Q6VY07 963 aa11.5□□□□□ -0.57
USP6NL-202ENST00000379237 RNF169Q8NCN4 708 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms