RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 USP17L19D6RCP7 530 aa13.05□□□□□ -0.32
VPS13A-204ENST00000376634 USP17L20D6RJB6 530 aa13.05□□□□□ -0.32
VPS13A-204ENST00000376634 ENO3P13929 434 aaPredicted RBP13.05□□□□□ -0.32
VPS13A-204ENST00000376634 GUCA1AP43080 201 aaPredicted RBP13.05□□□□□ -0.32
VPS13A-204ENST00000376634 GYS2P54840 703 aa13.05□□□□□ -0.32
VPS13A-204ENST00000376634 SESN2P58004 480 aaPredicted RBP13.05□□□□□ -0.32
VPS13A-204ENST00000376634 USP17L24Q0WX57 530 aa13.05□□□□□ -0.32
VPS13A-204ENST00000376634 USP17L6PQ6QN14 398 aa13.05□□□□□ -0.32
VPS13A-204ENST00000376634 TRIM48Q8IWZ4 208 aa13.05□□□□□ -0.32
VPS13A-204ENST00000376634 SHCBP1Q8NEM2 672 aa13.05□□□□□ -0.32
VPS13A-204ENST00000376634 MKL2Q9ULH7 1088 aa13.05□□□□□ -0.32
VPS13A-204ENST00000376634 ESYT3A0FGR9 886 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 CRKP46108 304 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 SGO1Q5FBB7 561 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 ANKMY2Q8IV38 441 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 ZNF512Q96ME7 567 aaPredicted RBP13.04□□□□□ -0.32
VPS13A-204ENST00000376634 FAM47DPA6NHR8 397 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 LRRC14Q15048 493 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 RBBP8Q99708 897 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 APOL5Q9BWW9 433 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 DDX47Q9H0S4 455 aaKnown RBP13.04□□□□□ -0.32
VPS13A-204ENST00000376634 EVPLLA8MZ36 301 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 PSMC6P62333 389 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 TRIM16LQ309B1 348 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 C11orf96Q7Z7L8 435 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 MRPL48Q96GC5 212 aaKnown RBP13.04□□□□□ -0.32
VPS13A-204ENST00000376634 MARCOQ9UEW3 520 aaPredicted RBP13.04□□□□□ -0.32
VPS13A-204ENST00000376634 SRP72O76094 671 aaKnown RBP13.04□□□□□ -0.32
VPS13A-204ENST00000376634 NCF4Q15080 339 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 LRRC36Q1X8D7 754 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 CHAMP1Q96JM3 812 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 SMAD5Q99717 465 aaKnown RBP13.04□□□□□ -0.32
VPS13A-204ENST00000376634 CCDC134Q9H6E4 229 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 RPRD1BQ9NQG5 326 aaKnown RBP13.04□□□□□ -0.32
VPS13A-204ENST00000376634 SLC25A13Q9UJS0 675 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 NEDD4P46934 1319 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 SPATA21Q7Z572 469 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 WNK4Q96J92 1243 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 TMEM2Q9UHN6 1383 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 PTRHD1Q6GMV3 140 aaKnown RBP13.04□□□□□ -0.32
VPS13A-204ENST00000376634 KRT77Q7Z794 578 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 C18orf8Q96DM3 657 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 MCEEQ96PE7 176 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 CCT7Q99832 543 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 PCMTD2Q9NV79 361 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 UTP6Q9NYH9 597 aaKnown RBP13.04□□□□□ -0.32
VPS13A-204ENST00000376634 WDR19Q8NEZ3 1342 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 IQGAP3Q86VI3 1631 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 PIGHQ14442 188 aaPredicted RBP13.04□□□□□ -0.32
VPS13A-204ENST00000376634 SWSAP1Q6NVH7 229 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 RAET1EQ8TD07 263 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 OSBPL3Q9H4L5 887 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 ACAD9Q9H845 621 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 KLHL11Q9NVR0 708 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 PGK2P07205 417 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 YWHABP31946 246 aaKnown RBP13.04□□□□□ -0.32
VPS13A-204ENST00000376634 ALDH6A1Q02252 535 aaKnown RBP13.04□□□□□ -0.32
VPS13A-204ENST00000376634 SLC44A4Q53GD3 710 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 ATL2Q8NHH9 583 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 JADE3Q92613 823 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 ARHGEF26Q96DR7 871 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 MASTLQ96GX5 879 aa13.04□□□□□ -0.32
VPS13A-204ENST00000376634 RSPH10B2B2RC85 870 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 TADA2AO75478 443 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 RSPH10BP0C881 870 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 CDC42EP1Q00587 391 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 PCSK7Q16549 785 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 TTC39BQ5VTQ0 682 aaPredicted RBP13.03□□□□□ -0.32
VPS13A-204ENST00000376634 RSPH1Q8WYR4 309 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 EIF2AK1Q9BQI3 630 aaKnown RBP13.03□□□□□ -0.32
VPS13A-204ENST00000376634 NCK2O43639 380 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 MCAMP43121 646 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 PRPF39Q86UA1 669 aaKnown RBP13.03□□□□□ -0.32
VPS13A-204ENST00000376634 PIN4Q9Y237 131 aaKnown RBP13.03□□□□□ -0.32
VPS13A-204ENST00000376634 PITPNM2Q9BZ72 1349 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 DARSP14868 501 aaKnown RBP13.03□□□□□ -0.32
VPS13A-204ENST00000376634 RXRBP28702 533 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 GUCY1A2P33402 732 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 MLH1P40692 756 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 PABPC5Q96DU9 382 aaKnown RBP13.03□□□□□ -0.32
VPS13A-204ENST00000376634 SIKE1Q9BRV8 207 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 TASP1Q9H6P5 420 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 RNF146Q9NTX7 359 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 HEG1Q9ULI3 1381 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 ECE2O60344 883 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 CAND2O75155 1236 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 SERPINB3P29508 390 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 LONP2Q86WA8 852 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 CCDC60Q8IWA6 550 aaPredicted RBP13.03□□□□□ -0.32
VPS13A-204ENST00000376634 KCNK16Q96T55 309 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 IL1RL2Q9HB29 575 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 PID1Q7Z2X4 250 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 EFL1Q7Z2Z2 1120 aaKnown RBP13.03□□□□□ -0.32
VPS13A-204ENST00000376634 TERB1Q8NA31 727 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 SLC38A7Q9NVC3 462 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 SLC16A3O15427 465 aaKnown RBP13.03□□□□□ -0.32
VPS13A-204ENST00000376634 KLHL2O95198 593 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 SPASTQ9UBP0 616 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 SH3BP1Q9Y3L3 701 aa13.03□□□□□ -0.32
VPS13A-204ENST00000376634 PRDM15P57071 1507 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms