RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 SKILP12757 684 aa18.47■□□□□ 0.55
HLA-DMA-201ENST00000374843 ANXA13P27216 316 aa18.47■□□□□ 0.55
HLA-DMA-201ENST00000374843 ZNF132P52740 706 aa18.47■□□□□ 0.55
HLA-DMA-201ENST00000374843 PPIGQ13427 754 aaKnown RBP eCLIP18.47■□□□□ 0.55
HLA-DMA-201ENST00000374843 TUSC3Q13454 348 aa18.47■□□□□ 0.55
HLA-DMA-201ENST00000374843 ARHGAP44Q17R89 818 aa18.47■□□□□ 0.55
HLA-DMA-201ENST00000374843 COL13A1Q5TAT6 717 aaPredicted RBP18.47■□□□□ 0.55
HLA-DMA-201ENST00000374843 IRF2BP2Q7Z5L9 587 aa18.47■□□□□ 0.55
HLA-DMA-201ENST00000374843 C7orf61Q8IZ16 206 aa18.47■□□□□ 0.55
HLA-DMA-201ENST00000374843 ELMO3Q96BJ8 720 aa18.47■□□□□ 0.55
HLA-DMA-201ENST00000374843 ZNF830Q96NB3 372 aaPredicted RBP18.47■□□□□ 0.55
HLA-DMA-201ENST00000374843 GOLGA2P5Q9HBQ8 144 aa18.47■□□□□ 0.55
HLA-DMA-201ENST00000374843 GDAP2Q9NXN4 497 aa18.47■□□□□ 0.55
HLA-DMA-201ENST00000374843 PRKAG2Q9UGJ0 569 aa18.47■□□□□ 0.55
HLA-DMA-201ENST00000374843 SSU72P8A0A1W2PR75 194 aa18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 FOXN3O00409 490 aaPredicted RBP18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 EVI5O60447 810 aa18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 POMCP01189 267 aa18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 CCDC172P0C7W6 258 aa18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 PNMA6AP0CW24 399 aaPredicted RBP18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 PAX3P23760 479 aa18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 AARSP49588 968 aaKnown RBP eCLIP18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 TAF6P49848 677 aa18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 YWHAEP62258 255 aaKnown RBP18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 MAPK8IP2Q13387 824 aaPredicted RBP18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 SV2CQ496J9 727 aa18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 LIMS2Q7Z4I7 341 aa18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 DDX27Q96GQ7 796 aaKnown RBP18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 CASD1Q96PB1 797 aa18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 SYT11Q9BT88 431 aa18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 MRPL9Q9BYD2 267 aaKnown RBP18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 TBC1D13Q9NVG8 400 aa18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 ARHGAP20Q9P2F6 1191 aa18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 LRFN2Q9ULH4 789 aa18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 POLIQ9UNA4 740 aa18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 INPP5FQ9Y2H2 1132 aa18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 BZW2Q9Y6E2 419 aaKnown RBP18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 TDRD15B5MCY1 1934 aaKnown RBP18.46■□□□□ 0.55
HLA-DMA-201ENST00000374843 PODXLO00592 558 aa18.45■□□□□ 0.54
HLA-DMA-201ENST00000374843 GFPT2O94808 682 aa18.45■□□□□ 0.54
HLA-DMA-201ENST00000374843 TNNC1P63316 161 aa18.45■□□□□ 0.54
HLA-DMA-201ENST00000374843 FPGSQ05932 587 aa18.45■□□□□ 0.54
HLA-DMA-201ENST00000374843 INCA1Q0VD86 236 aa18.45■□□□□ 0.54
HLA-DMA-201ENST00000374843 UPP1Q16831 310 aa18.45■□□□□ 0.54
HLA-DMA-201ENST00000374843 WDR72Q3MJ13 1102 aa18.45■□□□□ 0.54
HLA-DMA-201ENST00000374843 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.45■□□□□ 0.54
HLA-DMA-201ENST00000374843 TTC39CQ8N584 583 aa18.45■□□□□ 0.54
HLA-DMA-201ENST00000374843 SDCBP2Q9H190 292 aa18.45■□□□□ 0.54
HLA-DMA-201ENST00000374843 SMYD3Q9H7B4 428 aa18.45■□□□□ 0.54
HLA-DMA-201ENST00000374843 ZKSCAN5Q9Y2L8 839 aa18.45■□□□□ 0.54
HLA-DMA-201ENST00000374843 SCN1AP35498 2009 aa18.44■□□□□ 0.54
HLA-DMA-201ENST00000374843 SOWAHDA6NJG2 315 aa18.44■□□□□ 0.54
HLA-DMA-201ENST00000374843 TMEM189-UBE2V1I3L0A0 370 aa18.44■□□□□ 0.54
HLA-DMA-201ENST00000374843 SPTLC1O15269 473 aa18.44■□□□□ 0.54
HLA-DMA-201ENST00000374843 B4GALT3O60512 393 aa18.44■□□□□ 0.54
HLA-DMA-201ENST00000374843 AMHP03971 560 aa18.44■□□□□ 0.54
HLA-DMA-201ENST00000374843 IBSPP21815 317 aaPredicted RBP18.44■□□□□ 0.54
HLA-DMA-201ENST00000374843 LILRA4P59901 499 aa18.44■□□□□ 0.54
HLA-DMA-201ENST00000374843 WDR5P61964 334 aaKnown RBP18.44■□□□□ 0.54
HLA-DMA-201ENST00000374843 ASTE1Q2TB18 679 aaPredicted RBP18.44■□□□□ 0.54
HLA-DMA-201ENST00000374843 RAD9BQ6WBX8 426 aa18.44■□□□□ 0.54
HLA-DMA-201ENST00000374843 CCDC170Q8IYT3 715 aa18.44■□□□□ 0.54
HLA-DMA-201ENST00000374843 ABI1Q8IZP0 508 aa18.44■□□□□ 0.54
HLA-DMA-201ENST00000374843 OLIG1Q8TAK6 271 aa18.44■□□□□ 0.54
HLA-DMA-201ENST00000374843 CHP1Q99653 195 aa18.44■□□□□ 0.54
HLA-DMA-201ENST00000374843 RC3H2Q9HBD1 1191 aaKnown RBP18.44■□□□□ 0.54
HLA-DMA-201ENST00000374843 CISHQ9NSE2 258 aa18.44■□□□□ 0.54
HLA-DMA-201ENST00000374843 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.44■□□□□ 0.54
HLA-DMA-201ENST00000374843 NXF1Q9UBU9 619 aaKnown RBP18.44■□□□□ 0.54
HLA-DMA-201ENST00000374843 CASTOR2A6NHX0 329 aa18.43■□□□□ 0.54
HLA-DMA-201ENST00000374843 KPNA7A9QM74 516 aa18.43■□□□□ 0.54
HLA-DMA-201ENST00000374843 CLSTN1O94985 981 aa18.43■□□□□ 0.54
HLA-DMA-201ENST00000374843 CLCNKBP51801 687 aa18.43■□□□□ 0.54
HLA-DMA-201ENST00000374843 KLHL30Q0D2K2 578 aa18.43■□□□□ 0.54
HLA-DMA-201ENST00000374843 PSRC1Q6PGN9 363 aaPredicted RBP18.43■□□□□ 0.54
HLA-DMA-201ENST00000374843 SCARA5Q6ZMJ2 495 aa18.43■□□□□ 0.54
HLA-DMA-201ENST00000374843 C16orf59Q7L2K0 433 aa18.43■□□□□ 0.54
HLA-DMA-201ENST00000374843 COLGALT2Q8IYK4 626 aa18.43■□□□□ 0.54
HLA-DMA-201ENST00000374843 LRRC43Q8N309 656 aa18.43■□□□□ 0.54
HLA-DMA-201ENST00000374843 EPS8L1Q8TE68 723 aa18.43■□□□□ 0.54
HLA-DMA-201ENST00000374843 BADQ92934 168 aa18.43■□□□□ 0.54
HLA-DMA-201ENST00000374843 TOP1MTQ969P6 601 aa18.43■□□□□ 0.54
HLA-DMA-201ENST00000374843 NHEJ1Q9H9Q4 299 aaPredicted RBP18.43■□□□□ 0.54
HLA-DMA-201ENST00000374843 NOCTQ9UK39 431 aaKnown RBP18.43■□□□□ 0.54
HLA-DMA-201ENST00000374843 PYCARDQ9ULZ3 195 aa18.43■□□□□ 0.54
HLA-DMA-201ENST00000374843 FNDC1Q4ZHG4 1894 aaPredicted RBP18.43■□□□□ 0.54
HLA-DMA-201ENST00000374843 CYP26A1O43174 497 aa18.42■□□□□ 0.54
HLA-DMA-201ENST00000374843 TACC1O75410 805 aa18.42■□□□□ 0.54
HLA-DMA-201ENST00000374843 DGKIO75912 1065 aa18.42■□□□□ 0.54
HLA-DMA-201ENST00000374843 PLEKP08567 350 aaPredicted RBP18.42■□□□□ 0.54
HLA-DMA-201ENST00000374843 FAM163BP0C2L3 166 aa18.42■□□□□ 0.54
HLA-DMA-201ENST00000374843 KRT5P13647 590 aa18.42■□□□□ 0.54
HLA-DMA-201ENST00000374843 CLCN1P35523 988 aa18.42■□□□□ 0.54
HLA-DMA-201ENST00000374843 EIF4A3P38919 411 aaKnown RBP18.42■□□□□ 0.54
HLA-DMA-201ENST00000374843 GATMP50440 423 aa18.42■□□□□ 0.54
HLA-DMA-201ENST00000374843 PTK2Q05397 1052 aa18.42■□□□□ 0.54
HLA-DMA-201ENST00000374843 TDRD12Q587J7 1177 aaKnown RBP18.42■□□□□ 0.54
HLA-DMA-201ENST00000374843 TOP6BLQ8N6T0 577 aa18.42■□□□□ 0.54
HLA-DMA-201ENST00000374843 RBBP8NLQ8NC74 664 aaPredicted RBP18.42■□□□□ 0.54
HLA-DMA-201ENST00000374843 C3orf58Q8NDZ4 430 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms