RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 NKD1Q969G9 470 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 ARL8AQ96BM9 186 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 TNIP3Q96KP6 325 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 HINFPQ9BQA5 517 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 MAK16Q9BXY0 300 aaKnown RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 EPN3Q9H201 632 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 MAGEF1Q9HAY2 307 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 IL20Q9NYY1 176 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 SLC13A4Q9UKG4 626 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 SLC4A4Q9Y6R1 1079 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 ABCB11O95342 1321 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 A0A1W2PPH5 198 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 JAK2O60674 1132 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 TPM3P06753 285 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 ZNF865P0CJ78 1059 aaPredicted RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 ACRP10323 421 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 PDHBP11177 359 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 CPA1P15085 419 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 CYP7A1P22680 504 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 GPC1P35052 558 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 CENPAP49450 140 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 PRIM2P49643 509 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 HSD17B4P51659 736 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 KCNQ4P56696 695 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 JAG1P78504 1218 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 IFI35P80217 286 aaPredicted RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 PLCB4Q15147 1175 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 ZSCAN23Q3MJ62 389 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 HSF5Q4G112 596 aaPredicted RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 CYP4A22Q5TCH4 519 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 TAF2Q6P1X5 1199 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 FDX2Q6P4F2 183 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 DCLRE1AQ6PJP8 1040 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 CCDC84Q86UT8 332 aaPredicted RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 NKAIN4Q8IVV8 208 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 AHI1Q8N157 1196 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 FBXO15Q8NCQ5 510 aaPredicted RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 CCDC148Q8NFR7 591 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 WASF1Q92558 559 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 NACAP1Q9BZK3 213 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 GOLPH3LQ9H4A5 285 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 WDR6Q9NNW5 1121 aaKnown RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 KCNMB3Q9NPA1 279 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 PPP1R14DQ9NXH3 145 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 MAP10Q9P2G4 905 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 ATP6V1DQ9Y5K8 247 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 TRIM43BA6NCK2 446 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 ZSCAN5CA6NGD5 496 aaPredicted RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 VWA5AO00534 786 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 KIAA0754O94854 1291 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 POP4O95707 220 aaKnown RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 GALTP07902 379 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 TOP1P11387 765 aaKnown RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 IMPDH2P12268 514 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 HNF4AP41235 474 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 BTDP43251 543 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 OAZ1P54368 228 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 CACNB1Q02641 598 aaPredicted RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 PRKCZQ05513 592 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 PRPF4BQ13523 1007 aaKnown RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 CAMK2GQ13555 558 aaPredicted RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 ZNF267Q14586 743 aaPredicted RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 NCAPHQ15003 741 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 PSMD6Q15008 389 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 SNX17Q15036 470 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 POSTNQ15063 836 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 KLHDC10Q6PID8 442 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 HEATR4Q86WZ0 1026 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 C2CD5Q86YS7 1000 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 RBM12BQ8IXT5 1001 aaKnown RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 MGARPQ8TDB4 240 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 LENG9Q96B70 501 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 TRIM43Q96BQ3 446 aaPredicted RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 HSPBAP1Q96EW2 488 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 TMEM41AQ96HV5 264 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 C7orf26Q96N11 449 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 CCSER1Q9C0I3 900 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 TSPAN10Q9H1Z9 355 aaPredicted RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 OR10A4Q9H209 315 aa4.24□□□□□ -1.73
MCF2-203ENST00000370576 TNPO3Q9Y5L0 923 aaKnown RBP4.24□□□□□ -1.73
MCF2-203ENST00000370576 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 A8MVJ9 347 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 ADAMTS3O15072 1205 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 NCK2O43639 380 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 CUTAO60888 179 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 TMEM127O75204 238 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 KRT38O76015 456 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 BMP15O95972 392 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 ZNF18P17022 549 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 ACSL1P33121 698 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 NR2C2P49116 596 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 DSG1Q02413 1049 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 ZNF543Q08ER8 600 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 ARL13BQ3SXY8 428 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 CCDC183Q5T5S1 534 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 RASIP1Q5U651 963 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 YOD1Q5VVQ6 348 aaPredicted RBP4.23□□□□□ -1.73
MCF2-203ENST00000370576 IZUMO3Q5VZ72 239 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 SLC30A6Q6NXT4 461 aa4.23□□□□□ -1.73
MCF2-203ENST00000370576 CHRDL2Q6WN34 429 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms