RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 KIDINS220Q9ULH0 1771 aa20.65■□□□□ 0.9
LMO4-202ENST00000370544 SNX17Q15036 470 aa20.64■□□□□ 0.9
LMO4-202ENST00000370544 JAMLQ86YT9 394 aa20.64■□□□□ 0.9
LMO4-202ENST00000370544 XAB2Q9HCS7 855 aaKnown RBP20.64■□□□□ 0.9
LMO4-202ENST00000370544 MED24O75448 989 aa20.64■□□□□ 0.9
LMO4-202ENST00000370544 HMBSP08397 361 aa20.64■□□□□ 0.9
LMO4-202ENST00000370544 CPT1AP50416 773 aa20.64■□□□□ 0.9
LMO4-202ENST00000370544 EZH2Q15910 746 aaKnown RBP20.64■□□□□ 0.9
LMO4-202ENST00000370544 LONRF1Q17RB8 773 aa20.64■□□□□ 0.9
LMO4-202ENST00000370544 TTC30BQ8N4P2 665 aa20.64■□□□□ 0.9
LMO4-202ENST00000370544 AGR3Q8TD06 166 aa20.64■□□□□ 0.9
LMO4-202ENST00000370544 CCNI2Q6ZMN8 369 aaPredicted RBP20.64■□□□□ 0.89
LMO4-202ENST00000370544 HPDLQ96IR7 371 aa20.64■□□□□ 0.89
LMO4-202ENST00000370544 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.64■□□□□ 0.89
LMO4-202ENST00000370544 BRD2P25440 801 aaKnown RBP20.64■□□□□ 0.89
LMO4-202ENST00000370544 ALG6Q9Y672 507 aa20.64■□□□□ 0.89
LMO4-202ENST00000370544 RAD51CO43502 376 aa20.64■□□□□ 0.89
LMO4-202ENST00000370544 EPC2Q52LR7 807 aa20.64■□□□□ 0.89
LMO4-202ENST00000370544 WWP1Q9H0M0 922 aa20.64■□□□□ 0.89
LMO4-202ENST00000370544 RSAD1Q9HA92 442 aa20.64■□□□□ 0.89
LMO4-202ENST00000370544 DYRK4Q9NR20 520 aa20.64■□□□□ 0.89
LMO4-202ENST00000370544 PCSK1P29120 753 aa20.63■□□□□ 0.89
LMO4-202ENST00000370544 METTL5Q9NRN9 209 aaKnown RBP20.63■□□□□ 0.89
LMO4-202ENST00000370544 STOML1Q9UBI4 398 aa20.63■□□□□ 0.89
LMO4-202ENST00000370544 LSM7Q9UK45 103 aaKnown RBP20.63■□□□□ 0.89
LMO4-202ENST00000370544 PBXIP1Q96AQ6 731 aa20.63■□□□□ 0.89
LMO4-202ENST00000370544 NDE1Q9NXR1 346 aa20.63■□□□□ 0.89
LMO4-202ENST00000370544 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.63■□□□□ 0.895e-7■■■■□ 26.1
LMO4-202ENST00000370544 STK25O00506 426 aa20.63■□□□□ 0.89
LMO4-202ENST00000370544 GAS2O43903 313 aaKnown RBP20.63■□□□□ 0.89
LMO4-202ENST00000370544 KLRC1P26715 233 aa20.63■□□□□ 0.89
LMO4-202ENST00000370544 DCP1BQ8IZD4 617 aaKnown RBP20.63■□□□□ 0.89
LMO4-202ENST00000370544 SLC7A14Q8TBB6 771 aa20.63■□□□□ 0.89
LMO4-202ENST00000370544 SH3KBP1Q96B97 665 aa20.63■□□□□ 0.89
LMO4-202ENST00000370544 SEPT5Q99719 369 aaPredicted RBP20.63■□□□□ 0.89
LMO4-202ENST00000370544 FAM118BQ9BPY3 351 aa20.63■□□□□ 0.89
LMO4-202ENST00000370544 NUDT12Q9BQG2 462 aa20.63■□□□□ 0.89
LMO4-202ENST00000370544 CYP4F11Q9HBI6 524 aa20.63■□□□□ 0.89
LMO4-202ENST00000370544 PSMC3IPQ9P2W1 217 aaPredicted RBP20.63■□□□□ 0.89
LMO4-202ENST00000370544 TCP11X1B4DZS4 312 aa20.63■□□□□ 0.89
LMO4-202ENST00000370544 COL23A1Q86Y22 540 aaPredicted RBP20.63■□□□□ 0.89
LMO4-202ENST00000370544 FEZF2Q8TBJ5 459 aa20.63■□□□□ 0.89
LMO4-202ENST00000370544 C9orf72Q96LT7 481 aa20.63■□□□□ 0.89
LMO4-202ENST00000370544 CDH16O75309 829 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 MYO1DO94832 1006 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 GLB1LQ6UWU2 654 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 SPATA21Q7Z572 469 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 GNL1P36915 607 aaPredicted RBP20.62■□□□□ 0.89
LMO4-202ENST00000370544 SREBF1P36956 1147 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 MDH1P40925 334 aaKnown RBP20.62■□□□□ 0.89
LMO4-202ENST00000370544 HUNKP57058 714 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 TBCCQ15814 346 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 KRT35Q92764 455 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 ARL8AQ96BM9 186 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 ADAM33Q9BZ11 813 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 ITGB3P05106 788 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 KCNA2P16389 499 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 USP38Q8NB14 1042 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 GMCL1P1Q8NEA9 526 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 ANKS1AQ92625 1134 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 EHD4Q9H223 541 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 AIPL1Q9NZN9 384 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 PAK5Q9P286 719 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 LRRIQ1Q96JM4 1722 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 AP2B1P63010 937 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 CENPCQ03188 943 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 MAPRE2Q15555 327 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 CENPKQ9BS16 269 aa20.62■□□□□ 0.89
LMO4-202ENST00000370544 CELF2O95319 508 aaKnown RBP20.61■□□□□ 0.89
LMO4-202ENST00000370544 CHN1P15882 459 aa20.61■□□□□ 0.89
LMO4-202ENST00000370544 SPATA18Q8TC71 538 aa20.61■□□□□ 0.89
LMO4-202ENST00000370544 PABPC5Q96DU9 382 aaKnown RBP20.61■□□□□ 0.89
LMO4-202ENST00000370544 RSPH10B2B2RC85 870 aa20.61■□□□□ 0.89
LMO4-202ENST00000370544 RSPH10BP0C881 870 aa20.61■□□□□ 0.89
LMO4-202ENST00000370544 MCF2P10911 925 aa20.61■□□□□ 0.89
LMO4-202ENST00000370544 NLRP11P59045 1033 aaKnown RBP20.61■□□□□ 0.89
LMO4-202ENST00000370544 CUL2Q13617 745 aa20.61■□□□□ 0.89
LMO4-202ENST00000370544 SMTNL2Q2TAL5 461 aa20.61■□□□□ 0.89
LMO4-202ENST00000370544 EFHC1Q5JVL4 640 aa20.61■□□□□ 0.89
LMO4-202ENST00000370544 CYP4A22Q5TCH4 519 aa20.61■□□□□ 0.89
LMO4-202ENST00000370544 ADGRA1Q86SQ6 560 aa20.61■□□□□ 0.89
LMO4-202ENST00000370544 EFHBQ8N7U6 833 aa20.61■□□□□ 0.89
LMO4-202ENST00000370544 MUTP22033 750 aa20.61■□□□□ 0.89
LMO4-202ENST00000370544 GFAPP14136 432 aa20.61■□□□□ 0.89
LMO4-202ENST00000370544 SERPINB9P50453 376 aa20.61■□□□□ 0.89
LMO4-202ENST00000370544 ZNF200P98182 395 aaPredicted RBP20.61■□□□□ 0.89
LMO4-202ENST00000370544 PDK1Q15118 436 aa20.61■□□□□ 0.89
LMO4-202ENST00000370544 TMEM259Q4ZIN3 620 aa20.61■□□□□ 0.89
LMO4-202ENST00000370544 DCAF6Q58WW2 860 aa20.61■□□□□ 0.89
LMO4-202ENST00000370544 N4BP2L2Q92802 583 aaPredicted RBP20.61■□□□□ 0.89
LMO4-202ENST00000370544 DCUN1D1Q96GG9 259 aa20.61■□□□□ 0.89
LMO4-202ENST00000370544 PPP1R37O75864 691 aa20.6■□□□□ 0.89
LMO4-202ENST00000370544 UPP2O95045 317 aa20.6■□□□□ 0.89
LMO4-202ENST00000370544 PNPLA4P41247 253 aa20.6■□□□□ 0.89
LMO4-202ENST00000370544 GMCL1Q96IK5 515 aa20.6■□□□□ 0.89
LMO4-202ENST00000370544 CD44P16070 742 aaKnown RBP20.6■□□□□ 0.89
LMO4-202ENST00000370544 AARSP49588 968 aaKnown RBP eCLIP20.6■□□□□ 0.89
LMO4-202ENST00000370544 YAF2Q8IY57 180 aa20.6■□□□□ 0.89
LMO4-202ENST00000370544 SH2D3CQ8N5H7 860 aa20.6■□□□□ 0.89
LMO4-202ENST00000370544 ADGRB1O14514 1584 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms