RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 MSTO1Q9BUK6 570 aa9.97□□□□□ -0.81
CNIH4-202ENST00000366857 TRIM7Q9C029 511 aa9.97□□□□□ -0.81
CNIH4-202ENST00000366857 NOTCH4Q99466 2003 aa9.97□□□□□ -0.81
CNIH4-202ENST00000366857 CCDC169A6NNP5 214 aa9.97□□□□□ -0.81
CNIH4-202ENST00000366857 KIF5CO60282 957 aa9.97□□□□□ -0.81
CNIH4-202ENST00000366857 MGEA5O60502 916 aa9.97□□□□□ -0.81
CNIH4-202ENST00000366857 LSM8O95777 96 aaKnown RBP9.97□□□□□ -0.81
CNIH4-202ENST00000366857 CXCL8P10145 99 aa9.97□□□□□ -0.81
CNIH4-202ENST00000366857 CRYBB1P53674 252 aaPredicted RBP9.97□□□□□ -0.81
CNIH4-202ENST00000366857 MFAP3P55082 362 aa9.97□□□□□ -0.81
CNIH4-202ENST00000366857 C1QBPQ07021 282 aaKnown RBP9.97□□□□□ -0.81
CNIH4-202ENST00000366857 RDH13Q8NBN7 331 aa9.97□□□□□ -0.81
CNIH4-202ENST00000366857 KRT35Q92764 455 aa9.97□□□□□ -0.81
CNIH4-202ENST00000366857 SQORQ9Y6N5 450 aa9.97□□□□□ -0.81
CNIH4-202ENST00000366857 HHLA1C9JL84 531 aa9.96□□□□□ -0.81
CNIH4-202ENST00000366857 FSCN2O14926 492 aa9.96□□□□□ -0.81
CNIH4-202ENST00000366857 PAEPP09466 180 aa9.96□□□□□ -0.81
CNIH4-202ENST00000366857 EIF4BP23588 611 aaKnown RBP9.96□□□□□ -0.81
CNIH4-202ENST00000366857 CYP2C19P33261 490 aa9.96□□□□□ -0.81
CNIH4-202ENST00000366857 RGS2P41220 211 aa9.96□□□□□ -0.81
CNIH4-202ENST00000366857 CCNI2Q6ZMN8 369 aaPredicted RBP9.96□□□□□ -0.81
CNIH4-202ENST00000366857 RTN4RL1Q86UN2 441 aaPredicted RBP9.96□□□□□ -0.81
CNIH4-202ENST00000366857 RHPN2Q8IUC4 686 aa9.96□□□□□ -0.81
CNIH4-202ENST00000366857 SMARCAL1Q9NZC9 954 aa9.96□□□□□ -0.81
CNIH4-202ENST00000366857 PCYOX1Q9UHG3 505 aa9.96□□□□□ -0.81
CNIH4-202ENST00000366857 USP3Q9Y6I4 520 aa9.96□□□□□ -0.81
CNIH4-202ENST00000366857 CCDC151A5D8V7 595 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 TACC1O75410 805 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 SYF2O95926 243 aaKnown RBP9.96□□□□□ -0.82
CNIH4-202ENST00000366857 WEE2P0C1S8 567 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 MARK3P27448 753 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 CCND3P30281 292 aaPredicted RBP9.96□□□□□ -0.82
CNIH4-202ENST00000366857 ZNF157P51786 506 aaPredicted RBP9.96□□□□□ -0.82
CNIH4-202ENST00000366857 NOP14P78316 857 aaKnown RBP9.96□□□□□ -0.82
CNIH4-202ENST00000366857 KYAT1Q16773 422 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 KIAA0753Q2KHM9 967 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 ZDHHC24Q6UX98 284 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 CEP112Q8N8E3 955 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 C1orf131Q8NDD1 294 aaKnown RBP9.96□□□□□ -0.82
CNIH4-202ENST00000366857 OR6J1Q8NGC5 347 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 CPB2Q96IY4 423 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 MPHOSPH6Q99547 160 aaKnown RBP9.96□□□□□ -0.82
CNIH4-202ENST00000366857 CARD9Q9H257 536 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 NEUROG2Q9H2A3 272 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 GOLPH3Q9H4A6 298 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 SAGE1Q9NXZ1 904 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 ANKFY1Q9P2R3 1169 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 DMGDHQ9UI17 866 aaKnown RBP9.96□□□□□ -0.82
CNIH4-202ENST00000366857 TSKSQ9UJT2 592 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 ITGA11Q9UKX5 1188 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.96□□□□□ -0.82
CNIH4-202ENST00000366857 SEPT4O43236 478 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 GLI1P08151 1106 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 NCOA4Q13772 614 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 ZNF606Q8WXB4 792 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 SETD4Q9NVD3 440 aa9.96□□□□□ -0.82
CNIH4-202ENST00000366857 SHROOM3Q8TF72 1996 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 CLDN3O15551 220 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 FGFR1P11362 822 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 CHMP4BP1P59074 171 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 KIF5AQ12840 1032 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 TRADDQ15628 312 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 MAPK6Q16659 721 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 SGSM1Q2NKQ1 1148 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 GLE1Q53GS7 698 aaKnown RBP9.95□□□□□ -0.82
CNIH4-202ENST00000366857 LLGL2Q6P1M3 1020 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 RNF168Q8IYW5 571 aaPredicted RBP9.95□□□□□ -0.82
CNIH4-202ENST00000366857 FNIP1Q8TF40 1166 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 LRRC4CQ9HCJ2 640 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 PAK6Q9NQU5 681 aaPredicted RBP9.95□□□□□ -0.82
CNIH4-202ENST00000366857 GRHL1Q9NZI5 618 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 UVRAGQ9P2Y5 699 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 TCF4P15884 667 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 TCP1P17987 556 aaKnown RBP9.95□□□□□ -0.82
CNIH4-202ENST00000366857 TBXAS1P24557 533 aaPredicted RBP9.95□□□□□ -0.82
CNIH4-202ENST00000366857 LIG4P49917 911 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 PTPN11Q06124 597 aaPredicted RBP9.95□□□□□ -0.82
CNIH4-202ENST00000366857 RAB41Q5JT25 222 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 LMBRD2Q68DH5 695 aaPredicted RBP9.95□□□□□ -0.82
CNIH4-202ENST00000366857 CD302Q8IX05 232 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 SLC35F5Q8WV83 523 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 VIPAS39Q9H9C1 493 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 EURLQ9NYK6 297 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 TET1Q8NFU7 2136 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 TCRBV7S2A1N4TA0A589 114 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 B4GALT3O60512 393 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 ZNF623O75123 536 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 FTLP02792 175 aaPredicted RBP9.95□□□□□ -0.82
CNIH4-202ENST00000366857 DRG2P55039 364 aaKnown RBP9.95□□□□□ -0.82
CNIH4-202ENST00000366857 SOWAHAQ2M3V2 549 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 KLHDC8BQ8IXV7 354 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 CRYBG2Q8N1P7 616 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 ZNF784Q8NCA9 323 aaPredicted RBP9.95□□□□□ -0.82
CNIH4-202ENST00000366857 FAF2Q96CS3 445 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 CYFIP2Q96F07 1278 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 NOX5Q96PH1 765 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 LRRC1Q9BTT6 524 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 ZNF518BQ9C0D4 1074 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 RNF39Q9H2S5 420 aa9.95□□□□□ -0.82
CNIH4-202ENST00000366857 ZHX3Q9H4I2 956 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms