RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 TDRD10Q5VZ19 366 aaKnown RBP26.17■■□□□ 1.78
ALKAL1-201ENST00000358543 SCARA3Q6AZY7 606 aa26.17■■□□□ 1.78
ALKAL1-201ENST00000358543 DSTYKQ6XUX3 929 aa26.17■■□□□ 1.78
ALKAL1-201ENST00000358543 PIK3R5Q8WYR1 880 aa26.17■■□□□ 1.78
ALKAL1-201ENST00000358543 RXFP1Q9HBX9 757 aa26.17■■□□□ 1.78
ALKAL1-201ENST00000358543 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.17■■□□□ 1.78
ALKAL1-201ENST00000358543 ATG2AQ2TAZ0 1938 aa26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 HIDE1A8MVS5 230 aa26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 KPNA7A9QM74 516 aa26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 STAU1O95793 577 aaKnown RBP26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 TRIM49P0CI25 452 aa26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 TRIM49CP0CI26 452 aa26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 CCDC192P0DO97 292 aa26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 ATICP31939 592 aa26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 CREMQ03060 361 aa26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 PPP3CAQ08209 521 aa26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 BIRC3Q13489 604 aa26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 TPD52L1Q16890 204 aaPredicted RBP26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 CEP57Q86XR8 500 aa26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 APPL2Q8NEU8 664 aa26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 AUTS2Q8WXX7 1259 aa26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 B3GALT6Q96L58 329 aa26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 SENP8Q96LD8 212 aa26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 THAP9Q9H5L6 903 aa26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 TMEM8AQ9HCN3 771 aa26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 PCDHGC5Q9Y5F6 944 aa26.16■■□□□ 1.78
ALKAL1-201ENST00000358543 PHACTR2O75167 634 aa26.15■■□□□ 1.78
ALKAL1-201ENST00000358543 CSPG5O95196 566 aa26.15■■□□□ 1.78
ALKAL1-201ENST00000358543 TYMPP19971 482 aa26.15■■□□□ 1.78
ALKAL1-201ENST00000358543 TKTP29401 623 aaKnown RBP26.15■■□□□ 1.78
ALKAL1-201ENST00000358543 TRPC3Q13507 836 aa26.15■■□□□ 1.78
ALKAL1-201ENST00000358543 MRPL58Q14197 206 aaKnown RBP26.15■■□□□ 1.78
ALKAL1-201ENST00000358543 TCEAL5Q5H9L2 206 aa26.15■■□□□ 1.78
ALKAL1-201ENST00000358543 C11orf57Q6ZUT1 292 aaPredicted RBP26.15■■□□□ 1.78
ALKAL1-201ENST00000358543 ANKS3Q6ZW76 656 aa26.15■■□□□ 1.78
ALKAL1-201ENST00000358543 LNX1Q8TBB1 728 aaPredicted RBP26.15■■□□□ 1.78
ALKAL1-201ENST00000358543 RIN2Q8WYP3 895 aaPredicted RBP26.15■■□□□ 1.78
ALKAL1-201ENST00000358543 SLC35C1Q96A29 364 aa26.15■■□□□ 1.78
ALKAL1-201ENST00000358543 HPDLQ96IR7 371 aa26.15■■□□□ 1.78
ALKAL1-201ENST00000358543 CDCA3Q99618 268 aaPredicted RBP26.15■■□□□ 1.78
ALKAL1-201ENST00000358543 FUCA2Q9BTY2 467 aa26.15■■□□□ 1.78
ALKAL1-201ENST00000358543 EMILIN2Q9BXX0 1053 aa26.15■■□□□ 1.78
ALKAL1-201ENST00000358543 GDAP2Q9NXN4 497 aa26.15■■□□□ 1.78
ALKAL1-201ENST00000358543 FNIP2Q9P278 1114 aa26.15■■□□□ 1.78
ALKAL1-201ENST00000358543 VWA8A3KMH1 1905 aa26.14■■□□□ 1.78
ALKAL1-201ENST00000358543 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.14■■□□□ 1.78
ALKAL1-201ENST00000358543 SYCE3A1L190 88 aa26.14■■□□□ 1.78
ALKAL1-201ENST00000358543 FSD2A1L4K1 749 aa26.14■■□□□ 1.78
ALKAL1-201ENST00000358543 GCLMP48507 274 aa26.14■■□□□ 1.78
ALKAL1-201ENST00000358543 KRT39Q6A163 491 aa26.14■■□□□ 1.78
ALKAL1-201ENST00000358543 ADGRD2Q7Z7M1 963 aa26.14■■□□□ 1.78
ALKAL1-201ENST00000358543 TRIM59Q8IWR1 403 aa26.14■■□□□ 1.78
ALKAL1-201ENST00000358543 NAT10Q9H0A0 1025 aaKnown RBP26.14■■□□□ 1.78
ALKAL1-201ENST00000358543 DNAJC25Q9H1X3 360 aa26.14■■□□□ 1.78
ALKAL1-201ENST00000358543 TLE6Q9H808 572 aa26.14■■□□□ 1.78
ALKAL1-201ENST00000358543 VRTNQ9H8Y1 702 aa26.14■■□□□ 1.78
ALKAL1-201ENST00000358543 DSEQ9UL01 958 aa26.14■■□□□ 1.78
ALKAL1-201ENST00000358543 C2CD2LO14523 706 aa26.13■■□□□ 1.77
ALKAL1-201ENST00000358543 CYB561D2O14569 222 aa26.13■■□□□ 1.77
ALKAL1-201ENST00000358543 NCK2O43639 380 aa26.13■■□□□ 1.77
ALKAL1-201ENST00000358543 VNN1O95497 513 aa26.13■■□□□ 1.77
ALKAL1-201ENST00000358543 CYP11A1P05108 521 aa26.13■■□□□ 1.77
ALKAL1-201ENST00000358543 ODC1P11926 461 aa26.13■■□□□ 1.77
ALKAL1-201ENST00000358543 NCOA4Q13772 614 aa26.13■■□□□ 1.77
ALKAL1-201ENST00000358543 ZSCAN23Q3MJ62 389 aa26.13■■□□□ 1.77
ALKAL1-201ENST00000358543 DCAF17Q5H9S7 520 aaPredicted RBP26.13■■□□□ 1.77
ALKAL1-201ENST00000358543 VARS2Q5ST30 1063 aaKnown RBP26.13■■□□□ 1.77
ALKAL1-201ENST00000358543 TCERG1LQ5VWI1 586 aa26.13■■□□□ 1.77
ALKAL1-201ENST00000358543 IRF2BP1Q8IU81 584 aa26.13■■□□□ 1.77
ALKAL1-201ENST00000358543 FAM114A1Q8IWE2 563 aa26.13■■□□□ 1.77
ALKAL1-201ENST00000358543 KLHL5Q96PQ7 755 aa26.13■■□□□ 1.77
ALKAL1-201ENST00000358543 XYLT2Q9H1B5 865 aa26.13■■□□□ 1.77
ALKAL1-201ENST00000358543 BACE2Q9Y5Z0 518 aa26.13■■□□□ 1.77
ALKAL1-201ENST00000358543 H7C4K7 107 aa26.12■■□□□ 1.77
ALKAL1-201ENST00000358543 PMM2O15305 246 aa26.12■■□□□ 1.77
ALKAL1-201ENST00000358543 OAZ2O95190 189 aa26.12■■□□□ 1.77
ALKAL1-201ENST00000358543 C1RP00736 705 aa26.12■■□□□ 1.77
ALKAL1-201ENST00000358543 CNPP09543 421 aaKnown RBP26.12■■□□□ 1.77
ALKAL1-201ENST00000358543 CA8P35219 290 aa26.12■■□□□ 1.77
ALKAL1-201ENST00000358543 MYL6P60660 151 aa26.12■■□□□ 1.77
ALKAL1-201ENST00000358543 DUSP6Q16828 381 aa26.12■■□□□ 1.77
ALKAL1-201ENST00000358543 SGSM1Q2NKQ1 1148 aa26.12■■□□□ 1.77
ALKAL1-201ENST00000358543 DPH6Q7L8W6 267 aa26.12■■□□□ 1.77
ALKAL1-201ENST00000358543 MICALL1Q8N3F8 863 aa26.12■■□□□ 1.77
ALKAL1-201ENST00000358543 TAF4BQ92750 862 aa26.12■■□□□ 1.77
ALKAL1-201ENST00000358543 BPIFA3Q9BQP9 254 aa26.12■■□□□ 1.77
ALKAL1-201ENST00000358543 OXCT2Q9BYC2 517 aaPredicted RBP26.12■■□□□ 1.77
ALKAL1-201ENST00000358543 TEX28O15482 410 aa26.11■■□□□ 1.77
ALKAL1-201ENST00000358543 NRIP1P48552 1158 aa26.11■■□□□ 1.77
ALKAL1-201ENST00000358543 MXI1P50539 228 aa26.11■■□□□ 1.77
ALKAL1-201ENST00000358543 YWHAHQ04917 246 aaPredicted RBP26.11■■□□□ 1.77
ALKAL1-201ENST00000358543 PSMD5Q16401 504 aa26.11■■□□□ 1.77
ALKAL1-201ENST00000358543 ANO6Q4KMQ2 910 aa26.11■■□□□ 1.77
ALKAL1-201ENST00000358543 PRSS55Q6UWB4 352 aaPredicted RBP26.11■■□□□ 1.77
ALKAL1-201ENST00000358543 TOP6BLQ8N6T0 577 aa26.11■■□□□ 1.77
ALKAL1-201ENST00000358543 SPATA18Q8TC71 538 aa26.11■■□□□ 1.77
ALKAL1-201ENST00000358543 CNOT6LQ96LI5 555 aaKnown RBP26.11■■□□□ 1.77
ALKAL1-201ENST00000358543 MTRRQ9UBK8 725 aa26.11■■□□□ 1.77
ALKAL1-201ENST00000358543 NFE2L3Q9Y4A8 694 aa26.11■■□□□ 1.77
ALKAL1-201ENST00000358543 PER2O15055 1255 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms