RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 ZNF516Q92618 1163 aa17.22■□□□□ 0.35
FDPS-201ENST00000356657 PPP2R3CQ969Q6 453 aa17.22■□□□□ 0.35
FDPS-201ENST00000356657 TSPY26PQ9H489 355 aa17.22■□□□□ 0.35
FDPS-201ENST00000356657 FAM124BQ9H5Z6 455 aaPredicted RBP17.22■□□□□ 0.35
FDPS-201ENST00000356657 CERS4Q9HA82 394 aa17.22■□□□□ 0.35
FDPS-201ENST00000356657 GDAP2Q9NXN4 497 aa17.22■□□□□ 0.35
FDPS-201ENST00000356657 COQ4Q9Y3A0 265 aa17.22■□□□□ 0.35
FDPS-201ENST00000356657 GTPBP10A4D1E9 387 aaKnown RBP17.21■□□□□ 0.35
FDPS-201ENST00000356657 KPNA7A9QM74 516 aa17.21■□□□□ 0.35
FDPS-201ENST00000356657 KCNJ18B7U540 433 aa17.21■□□□□ 0.35
FDPS-201ENST00000356657 AFPP02771 609 aaKnown RBP17.21■□□□□ 0.35
FDPS-201ENST00000356657 URODP06132 367 aa17.21■□□□□ 0.35
FDPS-201ENST00000356657 FAM163BP0C2L3 166 aa17.21■□□□□ 0.35
FDPS-201ENST00000356657 ODC1P11926 461 aa17.21■□□□□ 0.35
FDPS-201ENST00000356657 P4HA1P13674 534 aa17.21■□□□□ 0.35
FDPS-201ENST00000356657 POU3F3P20264 500 aaPredicted RBP17.21■□□□□ 0.35
FDPS-201ENST00000356657 GCLMP48507 274 aa17.21■□□□□ 0.35
FDPS-201ENST00000356657 FMO5P49326 533 aa17.21■□□□□ 0.35
FDPS-201ENST00000356657 GUCY2FP51841 1108 aa17.21■□□□□ 0.35
FDPS-201ENST00000356657 PPP3CAQ08209 521 aa17.21■□□□□ 0.35
FDPS-201ENST00000356657 KCNJ12Q14500 433 aa17.21■□□□□ 0.35
FDPS-201ENST00000356657 NCAPHQ15003 741 aa17.21■□□□□ 0.35
FDPS-201ENST00000356657 SGSM1Q2NKQ1 1148 aa17.21■□□□□ 0.35
FDPS-201ENST00000356657 DPH6Q7L8W6 267 aa17.21■□□□□ 0.35
FDPS-201ENST00000356657 POF1BQ8WVV4 589 aa17.21■□□□□ 0.35
FDPS-201ENST00000356657 MRPL38Q96DV4 380 aaKnown RBP17.21■□□□□ 0.35
FDPS-201ENST00000356657 HPDLQ96IR7 371 aa17.21■□□□□ 0.35
FDPS-201ENST00000356657 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.21■□□□□ 0.359e-7■■■□□ 17.8
FDPS-201ENST00000356657 CHST7Q9NS84 486 aa17.21■□□□□ 0.35
FDPS-201ENST00000356657 VWA8A3KMH1 1905 aa17.21■□□□□ 0.35
FDPS-201ENST00000356657 CTSAP10619 480 aa17.2■□□□□ 0.34
FDPS-201ENST00000356657 ZNF18P17022 549 aa17.2■□□□□ 0.34
FDPS-201ENST00000356657 TYMPP19971 482 aa17.2■□□□□ 0.34
FDPS-201ENST00000356657 FGFR3P22607 806 aa17.2■□□□□ 0.34
FDPS-201ENST00000356657 PIK3CAP42336 1068 aa17.2■□□□□ 0.34
FDPS-201ENST00000356657 GLUD2P49448 558 aa17.2■□□□□ 0.34
FDPS-201ENST00000356657 KCNH2Q12809 1159 aa17.2■□□□□ 0.34
FDPS-201ENST00000356657 IQCB1Q15051 598 aa17.2■□□□□ 0.34
FDPS-201ENST00000356657 TIGD5Q53EQ6 642 aa17.2■□□□□ 0.34
FDPS-201ENST00000356657 SMYD5Q6GMV2 418 aa17.2■□□□□ 0.34
FDPS-201ENST00000356657 KIAA1841Q6NSI8 718 aa17.2■□□□□ 0.34
FDPS-201ENST00000356657 DHX40Q8IX18 779 aaKnown RBP17.2■□□□□ 0.34
FDPS-201ENST00000356657 VPS52Q8N1B4 723 aa17.2■□□□□ 0.34
FDPS-201ENST00000356657 TMEM86AQ8N2M4 240 aa17.2■□□□□ 0.34
FDPS-201ENST00000356657 BCL7CQ8WUZ0 217 aaPredicted RBP17.2■□□□□ 0.34
FDPS-201ENST00000356657 TUBGCP2Q9BSJ2 902 aa17.2■□□□□ 0.34
FDPS-201ENST00000356657 TTPALQ9BTX7 342 aa17.2■□□□□ 0.34
FDPS-201ENST00000356657 ZBP1Q9H171 429 aa17.2■□□□□ 0.34
FDPS-201ENST00000356657 ALG13Q9NP73 1137 aaKnown RBP17.2■□□□□ 0.34
FDPS-201ENST00000356657 SAMSN1Q9NSI8 373 aaKnown RBP17.2■□□□□ 0.34
FDPS-201ENST00000356657 FANCLQ9NW38 375 aa17.2■□□□□ 0.34
FDPS-201ENST00000356657 PCDHB8Q9UN66 801 aa17.2■□□□□ 0.34
FDPS-201ENST00000356657 GOLGA6L19H0YKK7 550 aa17.19■□□□□ 0.34
FDPS-201ENST00000356657 LPXNO60711 386 aa17.19■□□□□ 0.34
FDPS-201ENST00000356657 ASS1P00966 412 aaKnown RBP17.19■□□□□ 0.34
FDPS-201ENST00000356657 MYL7Q01449 175 aa17.19■□□□□ 0.34
FDPS-201ENST00000356657 DSG1Q02413 1049 aa17.19■□□□□ 0.34
FDPS-201ENST00000356657 SMC1AQ14683 1233 aaKnown RBP17.19■□□□□ 0.34
FDPS-201ENST00000356657 ZNF699Q32M78 642 aa17.19■□□□□ 0.34
FDPS-201ENST00000356657 FAM171A1Q5VUB5 890 aa17.19■□□□□ 0.34
FDPS-201ENST00000356657 CD300LGQ6UXG3 332 aa17.19■□□□□ 0.34
FDPS-201ENST00000356657 ANKS3Q6ZW76 656 aa17.19■□□□□ 0.34
FDPS-201ENST00000356657 SPRED2Q7Z698 418 aa17.19■□□□□ 0.34
FDPS-201ENST00000356657 GDPD5Q8WTR4 605 aa17.19■□□□□ 0.34
FDPS-201ENST00000356657 PIK3R5Q8WYR1 880 aa17.19■□□□□ 0.34
FDPS-201ENST00000356657 GPR62Q9BZJ7 368 aa17.19■□□□□ 0.34
FDPS-201ENST00000356657 ENTPD7Q9NQZ7 604 aa17.19■□□□□ 0.34
FDPS-201ENST00000356657 MRPL17Q9NRX2 175 aaKnown RBP17.19■□□□□ 0.34
FDPS-201ENST00000356657 CACNG4Q9UBN1 327 aa17.19■□□□□ 0.34
FDPS-201ENST00000356657 TSC2P49815 1807 aa17.19■□□□□ 0.34
FDPS-201ENST00000356657 LRRC10BA6NIK2 292 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 H7C4K7 107 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 GRM6O15303 877 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 HUS1O60921 280 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 C1RP00736 705 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 HLA-DRAP01903 254 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 CYP11A1P05108 521 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 CDK11BP21127 795 aaKnown RBP17.18■□□□□ 0.34
FDPS-201ENST00000356657 IGFBP4P22692 258 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 DSTYKQ6XUX3 929 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 TMC7Q7Z402 723 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 TTC39CQ8N584 583 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 TOP6BLQ8N6T0 577 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 HASPINQ8TF76 798 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 SENP8Q96LD8 212 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 TCF25Q9BQ70 676 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 XYLT2Q9H1B5 865 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 CBX8Q9HC52 389 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 RAB20Q9NX57 234 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 F8W810 466 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 PPEF2O14830 753 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 FSCN2O14926 492 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 VNN1O95497 513 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 CST3P01034 146 aaPredicted RBP17.18■□□□□ 0.34
FDPS-201ENST00000356657 TNNC1P63316 161 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 CBWD6Q4V339 395 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 ZNF667Q5HYK9 610 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 WDR44Q5JSH3 913 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 CBWD3Q5JTY5 395 aa17.18■□□□□ 0.34
FDPS-201ENST00000356657 CBWD5Q5RIA9 395 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms