RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 FLT1P17948 1338 aa16.61■□□□□ 0.25
RTN3-205ENST00000356000 FRMPD4Q14CM0 1322 aa16.61■□□□□ 0.25
RTN3-205ENST00000356000 CICQ96RK0 1608 aaPredicted RBP16.6■□□□□ 0.25
RTN3-205ENST00000356000 ADCY6O43306 1168 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 MGEA5O60502 916 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 TM7SF2O76062 418 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 TKTP29401 623 aaKnown RBP16.6■□□□□ 0.25
RTN3-205ENST00000356000 PHKA2P46019 1235 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 UBE3CQ15386 1083 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 PCNX4Q63HM2 1172 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 RHBDF2Q6PJF5 856 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 POTEHQ6S545 545 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 RFWD2Q8NHY2 731 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 STRBPQ96SI9 672 aaKnown RBP16.6■□□□□ 0.25
RTN3-205ENST00000356000 NACAP1Q9BZK3 213 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 S100A14Q9HCY8 104 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 NEU2Q9Y3R4 380 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 RGPD2P0DJD1 1756 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 IQCA1LA6NCM1 817 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 SOBPA7XYQ1 873 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 DGKIO75912 1065 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 ZNF12P17014 697 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 PPARGP37231 505 aaPredicted RBP16.6■□□□□ 0.25
RTN3-205ENST00000356000 PRKCIP41743 596 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 STT3AP46977 705 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 AMPD3Q01432 767 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 FOLH1Q04609 750 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 DCDC5Q6ZRR9 648 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 LSM14AQ8ND56 463 aaKnown RBP16.6■□□□□ 0.25
RTN3-205ENST00000356000 ZNF75CPQ92670 426 aaPredicted RBP16.6■□□□□ 0.25
RTN3-205ENST00000356000 PRR11Q96HE9 360 aaPredicted RBP16.6■□□□□ 0.25
RTN3-205ENST00000356000 MRPL1Q9BYD6 325 aaKnown RBP16.6■□□□□ 0.25
RTN3-205ENST00000356000 EPB41L4AQ9HCS5 686 aaPredicted RBP16.6■□□□□ 0.25
RTN3-205ENST00000356000 QPCTLQ9NXS2 382 aa16.6■□□□□ 0.25
RTN3-205ENST00000356000 TTLL13PA6NNM8 815 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 H3BSA7 217 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 DENRO43583 198 aaKnown RBP16.59■□□□□ 0.25
RTN3-205ENST00000356000 CSF1RP07333 972 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 FGFR1P11362 822 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 NOP14P78316 857 aaKnown RBP16.59■□□□□ 0.25
RTN3-205ENST00000356000 DMPKQ09013 629 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 RASGRF1Q13972 1273 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 CTTNQ14247 550 aaKnown RBP16.59■□□□□ 0.25
RTN3-205ENST00000356000 KRT81Q14533 505 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 LRRC36Q1X8D7 754 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 LPCAT4Q643R3 524 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 FAM91A1Q658Y4 838 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 TRABD2AQ86V40 505 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 IFNL3Q8IZI9 196 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 PPP4R1Q8TF05 950 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 ALG3Q92685 438 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 RRN3Q9NYV6 651 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 WHRNQ9P202 907 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 DCTN4Q9UJW0 460 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 PLA2G4CQ9UP65 541 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 RTL9Q8NET4 1388 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 SYNGAP1Q96PV0 1343 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 TXNDC9O14530 226 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 KDM1AO60341 852 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 OCM2P0CE71 109 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 OCMP0CE72 109 aaPredicted RBP16.59■□□□□ 0.25
RTN3-205ENST00000356000 VDRP11473 427 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 PHBP35232 272 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 CHKAP35790 457 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 NCOA4Q13772 614 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 USP41Q3LFD5 358 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 IL23RQ5VWK5 629 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 RNF111Q6ZNA4 994 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 TMC7Q7Z402 723 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 ULK2Q8IYT8 1036 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 ZDHHC14Q8IZN3 488 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 DDX12PQ92771 950 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 ZNF696Q9H7X3 374 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 OSGEPQ9NPF4 335 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 SLC7A8Q9UHI5 535 aa16.59■□□□□ 0.25
RTN3-205ENST00000356000 NCANO14594 1321 aa16.58■□□□□ 0.25
RTN3-205ENST00000356000 FAM47E-STBD1D6RA91 191 aa16.58■□□□□ 0.25
RTN3-205ENST00000356000 PLEKHA8P1O95397 391 aa16.58■□□□□ 0.25
RTN3-205ENST00000356000 FUCA1P04066 466 aa16.58■□□□□ 0.25
RTN3-205ENST00000356000 EIF2B2P49770 351 aaKnown RBP16.58■□□□□ 0.25
RTN3-205ENST00000356000 ERFP50548 548 aa16.58■□□□□ 0.25
RTN3-205ENST00000356000 NR1H3Q13133 447 aa16.58■□□□□ 0.25
RTN3-205ENST00000356000 PDAP1Q13442 181 aaKnown RBP16.58■□□□□ 0.25
RTN3-205ENST00000356000 APOFQ13790 326 aa16.58■□□□□ 0.25
RTN3-205ENST00000356000 CYP1B1Q16678 543 aa16.58■□□□□ 0.25
RTN3-205ENST00000356000 ARL13BQ3SXY8 428 aa16.58■□□□□ 0.25
RTN3-205ENST00000356000 SPTY2D1Q68D10 685 aaPredicted RBP16.58■□□□□ 0.25
RTN3-205ENST00000356000 LZTR1Q8N653 840 aa16.58■□□□□ 0.25
RTN3-205ENST00000356000 DDHD1Q8NEL9 900 aa16.58■□□□□ 0.25
RTN3-205ENST00000356000 USP33Q8TEY7 942 aa16.58■□□□□ 0.25
RTN3-205ENST00000356000 ANKRD36BP1Q96IX9 119 aa16.58■□□□□ 0.25
RTN3-205ENST00000356000 TBC1D23Q9NUY8 699 aa16.58■□□□□ 0.25
RTN3-205ENST00000356000 SMG5Q9UPR3 1016 aaKnown RBP16.58■□□□□ 0.25
RTN3-205ENST00000356000 MYH3P11055 1940 aa16.58■□□□□ 0.24
RTN3-205ENST00000356000 B2RBV5 119 aa16.58■□□□□ 0.24
RTN3-205ENST00000356000 THAP12O43422 761 aa16.58■□□□□ 0.24
RTN3-205ENST00000356000 HSPA8P11142 646 aaKnown RBP16.58■□□□□ 0.24
RTN3-205ENST00000356000 ENDOUP21128 410 aaKnown RBP16.58■□□□□ 0.24
RTN3-205ENST00000356000 COILP38432 576 aaPredicted RBP16.58■□□□□ 0.24
RTN3-205ENST00000356000 NR1H2P55055 460 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms