RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 SIX4Q9UIU6 781 aa15.05■□□□□ 0
CDK5RAP1-202ENST00000346416 PCDHA3Q9Y5H8 950 aa15.05■□□□□ 0
CDK5RAP1-202ENST00000346416 GOLGA6L10A0A0M3HER8 536 aa15.05■□□□□ -0
CDK5RAP1-202ENST00000346416 A6NJR5 290 aa15.05■□□□□ -0
CDK5RAP1-202ENST00000346416 TSPAN1O60635 241 aa15.05■□□□□ -0
CDK5RAP1-202ENST00000346416 PYGMP11217 842 aa15.05■□□□□ -0
CDK5RAP1-202ENST00000346416 CTNNA2P26232 953 aa15.05■□□□□ -0
CDK5RAP1-202ENST00000346416 MAATS1Q7Z4T9 603 aa15.05■□□□□ -0
CDK5RAP1-202ENST00000346416 PHF13Q86YI8 300 aaPredicted RBP15.05■□□□□ -0
CDK5RAP1-202ENST00000346416 C1orf127Q8N9H9 656 aa15.05■□□□□ -0
CDK5RAP1-202ENST00000346416 VCPIP1Q96JH7 1222 aa15.05■□□□□ -0
CDK5RAP1-202ENST00000346416 NXF1Q9UBU9 619 aaKnown RBP15.05■□□□□ -0
CDK5RAP1-202ENST00000346416 GNEQ9Y223 722 aaKnown RBP15.05■□□□□ -0
CDK5RAP1-202ENST00000346416 MYO1FO00160 1098 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 ERLIN2O94905 339 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 FAM153BP0C7A2 387 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 POU5F1Q01860 360 aaKnown RBP15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 FAM153CQ494X1 144 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 SEL1L2Q5TEA6 688 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 LIN9Q5TKA1 542 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 JADE1Q6IE81 842 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 MMS22LQ6ZRQ5 1243 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 CELF4Q9BZC1 486 aaKnown RBP15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 ERVK-5Q9HDB9 667 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 MED4Q9NPJ6 270 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 FAM153AQ9UHL3 310 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 CENPFP49454 3210 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 A0A1B0GUA9 196 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 MANSC4A6NHS7 340 aaPredicted RBP15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 TTI1O43156 1089 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 BRD2P25440 801 aaKnown RBP15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 RWDD2BP57060 319 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 NNTQ13423 1086 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 KCTD19Q17RG1 926 aaPredicted RBP15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 KIZQ2M2Z5 673 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 SLC10A6Q3KNW5 377 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 WDR72Q3MJ13 1102 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 ZNF410Q86VK4 478 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 TMEM130Q8N3G9 435 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 ASB7Q9H672 318 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 POLIQ9UNA4 740 aa15.04■□□□□ -0
CDK5RAP1-202ENST00000346416 GOLGA6BA6NDN3 693 aa15.03■□□□□ -0
CDK5RAP1-202ENST00000346416 RRN3P2A6NIE6 340 aa15.03■□□□□ -0
CDK5RAP1-202ENST00000346416 BHMG1C9JSJ3 638 aaPredicted RBP15.03■□□□□ -0
CDK5RAP1-202ENST00000346416 ITGB3P05106 788 aa15.03■□□□□ -0
CDK5RAP1-202ENST00000346416 FGFR4P22455 802 aa15.03■□□□□ -0
CDK5RAP1-202ENST00000346416 CYP2C19P33261 490 aa15.03■□□□□ -0
CDK5RAP1-202ENST00000346416 C1QBPQ07021 282 aaKnown RBP15.03■□□□□ -0
CDK5RAP1-202ENST00000346416 TMEM62Q0P6H9 643 aa15.03■□□□□ -0
CDK5RAP1-202ENST00000346416 PTP4A2Q12974 167 aa15.03■□□□□ -0
CDK5RAP1-202ENST00000346416 MAMLD1Q13495 774 aa15.03■□□□□ -0
CDK5RAP1-202ENST00000346416 PPP2R5EQ16537 467 aa15.03■□□□□ -0
CDK5RAP1-202ENST00000346416 OLFML2BQ68BL8 750 aa15.03■□□□□ -0
CDK5RAP1-202ENST00000346416 PPP1R2P3Q6NXS1 205 aa15.03■□□□□ -0
CDK5RAP1-202ENST00000346416 TSEN2Q8NCE0 465 aaKnown RBP15.03■□□□□ -0
CDK5RAP1-202ENST00000346416 FAM71BQ8TC56 605 aa15.03■□□□□ -0
CDK5RAP1-202ENST00000346416 PPP1R13LQ8WUF5 828 aa15.03■□□□□ -0
CDK5RAP1-202ENST00000346416 LENG1Q96BZ8 264 aaPredicted RBP15.03■□□□□ -0
CDK5RAP1-202ENST00000346416 FAM49AQ9H0Q0 323 aaPredicted RBP15.03■□□□□ -0
CDK5RAP1-202ENST00000346416 GINS2Q9Y248 185 aa15.03■□□□□ -0
CDK5RAP1-202ENST00000346416 AGPSO00116 658 aa15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 SYF2O95926 243 aaKnown RBP15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 F2P00734 622 aa15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 ZNF865P0CJ78 1059 aaPredicted RBP15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 HSPA6P17066 643 aa15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 GGCXP38435 758 aa15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 GUCY2FP51841 1108 aa15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 CUL1Q13616 776 aa15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 HLTFQ14527 1009 aaKnown RBP eCLIP15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 CCL14Q16627 93 aa15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 KYAT1Q16773 422 aa15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 ZNF667Q5HYK9 610 aa15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 PLEKHA7Q6IQ23 1121 aa15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 ILDR2Q71H61 639 aa15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 TLK2Q86UE8 772 aa15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 DDX42Q86XP3 938 aaKnown RBP eCLIP15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 EIF1ADQ8N9N8 165 aaKnown RBP15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 TFAP2BQ92481 460 aa15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 KAT2BQ92831 832 aa15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 ADPGKQ9BRR6 497 aa15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 MRPL47Q9HD33 250 aaKnown RBP15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 TRPM7Q96QT4 1865 aa15.02■□□□□ -0
CDK5RAP1-202ENST00000346416 SMIM10L2AP0DMW4 78 aa15.02□□□□□ -0.01
CDK5RAP1-202ENST00000346416 SMIM10L2BP0DMW5 78 aa15.02□□□□□ -0.01
CDK5RAP1-202ENST00000346416 MMP8P22894 467 aa15.02□□□□□ -0.01
CDK5RAP1-202ENST00000346416 ECHS1P30084 290 aa15.02□□□□□ -0.01
CDK5RAP1-202ENST00000346416 SLC1A1P43005 524 aa15.02□□□□□ -0.01
CDK5RAP1-202ENST00000346416 GYS2P54840 703 aa15.02□□□□□ -0.01
CDK5RAP1-202ENST00000346416 YWHAEP62258 255 aaKnown RBP15.02□□□□□ -0.01
CDK5RAP1-202ENST00000346416 IRX5P78411 483 aaPredicted RBP15.02□□□□□ -0.01
CDK5RAP1-202ENST00000346416 IRF5Q13568 498 aa15.02□□□□□ -0.01
CDK5RAP1-202ENST00000346416 ZDHHC14Q8IZN3 488 aa15.02□□□□□ -0.01
CDK5RAP1-202ENST00000346416 CXorf38Q8TB03 319 aa15.02□□□□□ -0.01
CDK5RAP1-202ENST00000346416 WHAMMQ8TF30 809 aa15.02□□□□□ -0.01
CDK5RAP1-202ENST00000346416 RIN2Q8WYP3 895 aaPredicted RBP15.02□□□□□ -0.01
CDK5RAP1-202ENST00000346416 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.02□□□□□ -0.01
CDK5RAP1-202ENST00000346416 VPS18Q9P253 973 aa15.02□□□□□ -0.01
CDK5RAP1-202ENST00000346416 NRCAMQ92823 1304 aa15.02□□□□□ -0.01
CDK5RAP1-202ENST00000346416 PROSCO94903 275 aa15.01□□□□□ -0.01
CDK5RAP1-202ENST00000346416 LSM8O95777 96 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms