RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 DCP1AQ9NPI6 582 aaPredicted RBP12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 C3orf70A6NLC5 250 aaPredicted RBP12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 CYLC2Q14093 348 aaPredicted RBP12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 TTC39BQ5VTQ0 682 aaPredicted RBP12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 ARHGEF26Q96DR7 871 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 PLEKHA8Q96JA3 519 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 FAM167AQ96KS9 214 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 OSBPL10Q9BXB5 764 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 LATS2Q9NRM7 1088 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 CACNA2D2Q9NY47 1150 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 MINPP1Q9UNW1 487 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 CCT8L1PA6NM43 557 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 RNF103O00237 685 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 SERPINB5P36952 375 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 NUDT2P50583 147 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 HSD17B4P51659 736 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 ATP2C1P98194 919 aaPredicted RBP12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 TRIM25Q14258 630 aaKnown RBP12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 HS6ST3Q8IZP7 471 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 NSUN6Q8TEA1 469 aaKnown RBP12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 SCFD1Q8WVM8 642 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 GPBP1L1Q9HC44 474 aaPredicted RBP12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 APEX2Q9UBZ4 518 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 A0A1W2PQC6 194 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 MAGEA4P43358 317 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 KRT76Q01546 638 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 CYP4A22Q5TCH4 519 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 MICU2Q8IYU8 434 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 UBA3Q8TBC4 463 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 PI4K2AQ9BTU6 479 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 CARD9Q9H257 536 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 AGAP1Q9UPQ3 857 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 KIF1BO60333 1816 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 SHANK2Q9UPX8 1470 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 PARNO95453 639 aaKnown RBP12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 PDGFRAP16234 1089 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 TAP1Q03518 808 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 ASAP3Q8TDY4 903 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 SYNMO15061 1565 aa12.73□□□□□ -0.37
SEMA6A-202ENST00000343348 TTC33Q6PID6 262 aaPredicted RBP12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 IPMKQ8NFU5 416 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 KCNK16Q96T55 309 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 C2orf40Q9H1Z8 148 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 HAO1Q9UJM8 370 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 FHOD1Q9Y613 1164 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 SLC29A2Q14542 456 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 BARGINQ6ZT62 677 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 ATPAF2Q8N5M1 289 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 CMTM5Q96DZ9 223 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 SGF29Q96ES7 293 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 NSL1Q96IY1 281 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 SCN3BQ9NY72 215 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 NFKBIL1Q9UBC1 381 aaPredicted RBP12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 F5H6K3 240 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 TCF3P15923 654 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 KLRC3Q07444 240 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 SPP2Q13103 211 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 SKIV2LQ15477 1246 aaKnown RBP12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 ZC2HC1CQ53FD0 456 aaPredicted RBP12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 MEI1Q5TIA1 1274 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 SPATA2LQ8IUW3 424 aaPredicted RBP12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 NOA1Q8NC60 698 aaKnown RBP12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 PIF1Q9H611 641 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 NOD2Q9HC29 1040 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 SLC1A1P43005 524 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 IRAK1P51617 712 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 LRIG3Q6UXM1 1119 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 RAD9BQ6WBX8 426 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 RASGRP2Q7LDG7 609 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 PCYOX1LQ8NBM8 494 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 SPATA18Q8TC71 538 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 GFM2Q969S9 779 aaKnown RBP12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 HOXC10Q9NYD6 342 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 C6orf203Q9P0P8 240 aaPredicted RBP12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 HERC5Q9UII4 1024 aaKnown RBP12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 IGSF1Q8N6C5 1336 aa12.72□□□□□ -0.37
SEMA6A-202ENST00000343348 CDH16O75309 829 aa12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 MAP3K6O95382 1288 aa12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 RALAP11233 206 aa12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 ITIH2P19823 946 aa12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 COMTP21964 271 aa12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 CTCFP49711 727 aaPredicted RBP12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 CHSY1Q86X52 802 aa12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 STMN3Q9NZ72 180 aa12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 DTNAQ9Y4J8 743 aa12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 SNX9Q9Y5X1 595 aa12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 RPAP1Q9BWH6 1393 aaPredicted RBP12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 HIST1H2AGP0C0S8 130 aaPredicted RBP12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 CDH2P19022 906 aaPredicted RBP12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 HIST1H2ADP20671 130 aa12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 ALDH6A1Q02252 535 aaKnown RBP12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 FAXCQ5TGI0 409 aa12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 TRIM69Q86WT6 500 aa12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 FAM71DQ8N9W8 422 aa12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 HIST1H2AHQ96KK5 128 aa12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 HIST1H2AJQ99878 128 aa12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 H2AFJQ9BTM1 129 aa12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 MUC3BQ9H195 1237 aa12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 GID8Q9NWU2 228 aa12.71□□□□□ -0.37
SEMA6A-202ENST00000343348 PIN4Q9Y237 131 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms