RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 EVPLQ92817 2033 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 GRIN2DO15399 1336 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 UBE4BO95155 1302 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 TNFRSF8P28908 595 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 MARSP56192 900 aaKnown RBP13.92□□□□□ -0.18
COL18A1-201ENST00000342220 ZNF699Q32M78 642 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 GLE1Q53GS7 698 aaKnown RBP13.92□□□□□ -0.18
COL18A1-201ENST00000342220 MEI1Q5TIA1 1274 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 ALS2CLQ60I27 953 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 PEX26Q7Z412 305 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 CEP57Q86XR8 500 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 ZNF653Q96CK0 615 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 ACO2Q99798 780 aaKnown RBP13.92□□□□□ -0.18
COL18A1-201ENST00000342220 NTPCRQ9BSD7 190 aaKnown RBP13.92□□□□□ -0.18
COL18A1-201ENST00000342220 CDT1Q9H211 546 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 GDF3Q9NR23 364 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 GRID2IPA4D2P6 1211 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 GOLGA8SH3BPF8 625 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 MSCO60682 206 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 YY1P25490 414 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 ACTN3Q08043 901 aaPredicted RBP13.92□□□□□ -0.18
COL18A1-201ENST00000342220 BCAS4Q8TDM0 211 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 TRIM31Q9BZY9 425 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 AGAP1Q9UPQ3 857 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 CEP290O15078 2479 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 OGTO15294 1046 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 CCND3P30281 292 aaPredicted RBP13.92□□□□□ -0.18
COL18A1-201ENST00000342220 C17orf99Q6UX52 265 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 NOP9Q86U38 636 aaKnown RBP13.92□□□□□ -0.18
COL18A1-201ENST00000342220 LNX1Q8TBB1 728 aaPredicted RBP13.92□□□□□ -0.18
COL18A1-201ENST00000342220 CASKIN2Q8WXE0 1202 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 STRA6Q9BX79 667 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 AP1M1Q9BXS5 423 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 RNF186Q9NXI6 227 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 NUB1Q9Y5A7 615 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 PCDHGC5Q9Y5F6 944 aa13.92□□□□□ -0.18
COL18A1-201ENST00000342220 IGKV6D-21A0A0A0MT36 114 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 A0A0B4J269 797 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 EIF3HO15372 352 aaKnown RBP eCLIP13.91□□□□□ -0.181e-13■□□□□ 9.5
COL18A1-201ENST00000342220 GARTP22102 1010 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 PEX19P40855 299 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 ATP1A2P50993 1020 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 SP3Q02447 781 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 DUOXA2Q1HG44 320 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 ARHGEF26Q96DR7 871 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 ANKRD36BP1Q96IX9 119 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 AGPAT1Q99943 283 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 CXCL16Q9H2A7 254 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 GOLGA2P5Q9HBQ8 144 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 AIPL1Q9NZN9 384 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 CPSF2Q9P2I0 782 aaKnown RBP13.91□□□□□ -0.18
COL18A1-201ENST00000342220 RNF14Q9UBS8 474 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 PARP14Q460N5 1801 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 LACTBL1A8MY62 500 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 SPOPO43791 374 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 CFHP08603 1231 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 GCKP35557 465 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 PSEN2P49810 448 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 ATN1P54259 1190 aaPredicted RBP13.91□□□□□ -0.18
COL18A1-201ENST00000342220 PDCLQ13371 301 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 MPZL3Q6UWV2 235 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 CRELD2Q6UXH1 353 aaPredicted RBP13.91□□□□□ -0.18
COL18A1-201ENST00000342220 TACO1Q9BSH4 297 aaKnown RBP13.91□□□□□ -0.18
COL18A1-201ENST00000342220 EIF2AQ9BY44 585 aaKnown RBP13.91□□□□□ -0.18
COL18A1-201ENST00000342220 C2orf40Q9H1Z8 148 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 ACKR2O00590 384 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 CHUKO15111 745 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 CA12O43570 354 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 POLR2BP30876 1174 aaKnown RBP13.91□□□□□ -0.18
COL18A1-201ENST00000342220 PTENP60484 403 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 LACTBP83111 547 aaPredicted RBP13.91□□□□□ -0.18
COL18A1-201ENST00000342220 PAK2Q13177 524 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 ZNF484Q5JVG2 852 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 CFAP58Q5T655 872 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 CPNE8Q86YQ8 564 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 SLC9A9Q8IVB4 645 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 APBA2Q99767 749 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 XPNPEP3Q9NQH7 507 aa13.91□□□□□ -0.18
COL18A1-201ENST00000342220 LDHAP00338 332 aaKnown RBP13.9□□□□□ -0.18
COL18A1-201ENST00000342220 THPOP40225 353 aa13.9□□□□□ -0.18
COL18A1-201ENST00000342220 NNTQ13423 1086 aa13.9□□□□□ -0.18
COL18A1-201ENST00000342220 NAA25Q14CX7 972 aa13.9□□□□□ -0.18
COL18A1-201ENST00000342220 ZKSCAN8Q15776 578 aaPredicted RBP13.9□□□□□ -0.18
COL18A1-201ENST00000342220 JADE1Q6IE81 842 aa13.9□□□□□ -0.18
COL18A1-201ENST00000342220 MAMDC4Q6UXC1 1216 aa13.9□□□□□ -0.18
COL18A1-201ENST00000342220 GCOM2Q9BZD3 368 aaPredicted RBP13.9□□□□□ -0.18
COL18A1-201ENST00000342220 NXF3Q9H4D5 531 aaKnown RBP13.9□□□□□ -0.18
COL18A1-201ENST00000342220 EME2A4GXA9 379 aaPredicted RBP13.9□□□□□ -0.18
COL18A1-201ENST00000342220 MAGEB2O15479 319 aa13.9□□□□□ -0.18
COL18A1-201ENST00000342220 RAD51CO43502 376 aa13.9□□□□□ -0.18
COL18A1-201ENST00000342220 ZNF513Q8N8E2 541 aaPredicted RBP13.9□□□□□ -0.18
COL18A1-201ENST00000342220 SLC35G2Q8TBE7 412 aa13.9□□□□□ -0.18
COL18A1-201ENST00000342220 IFT122Q9HBG6 1241 aa13.9□□□□□ -0.18
COL18A1-201ENST00000342220 TLL2Q9Y6L7 1015 aa13.9□□□□□ -0.18
COL18A1-201ENST00000342220 M0QZ92 97 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 AP1G2O75843 785 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 PDGFRBP09619 1106 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 AKR1A1P14550 325 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 RPS6KA1Q15418 735 aa13.89□□□□□ -0.19
COL18A1-201ENST00000342220 ODF2Q5BJF6 829 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms