RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 FAM160B1Q5W0V3 765 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 USP37Q86T82 979 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 SPATA24Q86W54 205 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 SPATS2Q86XZ4 545 aaKnown RBP11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 SPATA33Q96N06 139 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 TSC22D3Q99576 134 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 KIFC3Q9BVG8 833 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 THAP2Q9H0W7 228 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 VCXQ9H320 206 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 METTL14Q9HCE5 456 aaKnown RBP11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 NPHS2Q9NP85 383 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 NRBP2Q9NSY0 501 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 TRPC6Q9Y210 931 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 EMSYQ7Z589 1322 aa11.08□□□□□ -0.64
CAPRIN1-201ENST00000341394 TARSL2A2RTX5 802 aaKnown RBP11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 UNCXA6NJT0 531 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 LIG4P49917 911 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 GRAMD1BQ3KR37 738 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 WDR93Q6P2C0 686 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 EPM2AIP1Q7L775 607 aaPredicted RBP11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 SCFD1Q8WVM8 642 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 MS4A4AQ96JQ5 239 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 POP1Q99575 1024 aaKnown RBP11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 ACTR5Q9H9F9 607 aaPredicted RBP11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 RAB20Q9NX57 234 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 TRIM33Q9UPN9 1127 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 DCDC2CA8MYV0 355 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 SPATA31C2B4DYI2 1134 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 FAM107AO95990 144 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 KRT1P04264 644 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 ESRRAP11474 423 aaPredicted RBP11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 NCF2P19878 526 aaPredicted RBP11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 KNOP1Q1ED39 458 aaKnown RBP11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 KLHDC7AQ5VTJ3 777 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 PLEKHH3Q7Z736 793 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 ZBED8Q8IZ13 594 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 DDX20Q9UHI6 824 aaKnown RBP11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 RAB21Q9UL25 225 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 ARID2Q68CP9 1835 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 UBTFL6P0CB48 400 aaPredicted RBP11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 CYP2B6P20813 491 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 STAT5BP51692 787 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 PRKCEQ02156 737 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 KAT2BQ92831 832 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 RMDN2Q96LZ7 410 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 TMEM237Q96Q45 408 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 ZCWPW1Q9H0M4 648 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 ZNF233A6NK53 670 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 CSDE1O75534 798 aaKnown RBP11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 UBOX5O94941 541 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 ITGBL1O95965 494 aaPredicted RBP11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 DESP17661 470 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 FLT3P36888 993 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 SCTRP47872 440 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 SOX10P56693 466 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 TFAMQ00059 246 aaKnown RBP11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 SEZ6Q53EL9 994 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 CENPPQ6IPU0 288 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 DAW1Q8N136 415 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 SEPT1Q8WYJ6 367 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 FGD4Q96M96 766 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 NT5C1BQ96P26 610 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 VIPAS39Q9H9C1 493 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 GPRC5CQ9NQ84 441 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 IRAK4Q9NWZ3 460 aa11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 FNDC3AQ9Y2H6 1198 aaKnown RBP11.07□□□□□ -0.64
CAPRIN1-201ENST00000341394 RASSF10A6NK89 507 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 GYG2O15488 501 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 ANP32DO95626 131 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 ZCCHC18P0CG32 403 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 UBA1P22314 1058 aaKnown RBP11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 RANBP1P43487 201 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 KRT17Q04695 432 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 BTKQ06187 659 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 STRN3Q13033 797 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 C6orf118Q5T5N4 469 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 LRRC55Q6ZSA7 311 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 ARMCX2Q7L311 632 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 SLC7A3Q8WY07 619 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 FAM161BQ96MY7 647 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 LRRC37BQ96QE4 947 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 FIZ1Q96SL8 496 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 IFT122Q9HBG6 1241 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 ZFYVE28Q9HCC9 887 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 CTNNAL1Q9UBT7 734 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 HAO1Q9UJM8 370 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 TNPO2O14787 897 aaKnown RBP11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 STRNO43815 780 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 PFDN1O60925 122 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 KCNA2P16389 499 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 MX2P20592 715 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 PIK3CAP42336 1068 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 RARRES1P49788 294 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 DMP1Q13316 513 aaPredicted RBP11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 ZCWPW2Q504Y3 356 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 MIIPQ5JXC2 388 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 ZNF571Q7Z3V5 609 aaPredicted RBP11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 SMC1BQ8NDV3 1235 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 MCUQ8NE86 351 aa11.06□□□□□ -0.64
CAPRIN1-201ENST00000341394 MORC4Q8TE76 937 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms