RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 CDR1P51861 262 aa13.43□□□□□ -0.26
TPM3-204ENST00000323144 YWHAHQ04917 246 aaPredicted RBP13.43□□□□□ -0.26
TPM3-204ENST00000323144 ZBTB6Q15916 424 aa13.43□□□□□ -0.26
TPM3-204ENST00000323144 PHLDB3Q6NSJ2 640 aa13.43□□□□□ -0.26
TPM3-204ENST00000323144 TPRG1Q6ZUI0 275 aa13.43□□□□□ -0.26
TPM3-204ENST00000323144 KCTD17Q8N5Z5 321 aa13.43□□□□□ -0.26
TPM3-204ENST00000323144 FAM84AQ96KN4 292 aa13.43□□□□□ -0.26
TPM3-204ENST00000323144 CPSF3Q9UKF6 684 aaKnown RBP13.43□□□□□ -0.26
TPM3-204ENST00000323144 MTF2Q9Y483 593 aaPredicted RBP13.43□□□□□ -0.26
TPM3-204ENST00000323144 KIAA1549LQ6ZVL6 1849 aa13.43□□□□□ -0.26
TPM3-204ENST00000323144 DMXL1Q9Y485 3027 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 SPTLC1O15269 473 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 SOAT2O75908 522 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 BMP15O95972 392 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 ELF1P32519 619 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 WNT7BP56706 349 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 STARD6P59095 220 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 UBXN2BQ14CS0 331 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 FAM78AQ5JUQ0 283 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 TANGO2Q6ICL3 276 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 PDZD4Q76G19 769 aaPredicted RBP13.42□□□□□ -0.26
TPM3-204ENST00000323144 DYMQ7RTS9 669 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 TMC8Q8IU68 726 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 EFCAB13Q8IY85 973 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 APPL2Q8NEU8 664 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 BEST2Q8NFU1 509 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 OR10T2Q8NGX3 314 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 NKD2Q969F2 451 aaPredicted RBP13.42□□□□□ -0.26
TPM3-204ENST00000323144 FAM212AQ96EL1 285 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 CLIC6Q96NY7 704 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 DDX23Q9BUQ8 820 aaKnown RBP13.42□□□□□ -0.26
TPM3-204ENST00000323144 FGFBP2Q9BYJ0 223 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 DNAJC25Q9H1X3 360 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 RPF1Q9H9Y2 349 aaKnown RBP13.42□□□□□ -0.26
TPM3-204ENST00000323144 PLEKHA5Q9HAU0 1116 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 AVENQ9NQS1 362 aaPredicted RBP13.42□□□□□ -0.26
TPM3-204ENST00000323144 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 DAXXQ9UER7 740 aaPredicted RBP13.42□□□□□ -0.26
TPM3-204ENST00000323144 AFF4Q9UHB7 1163 aaKnown RBP13.42□□□□□ -0.26
TPM3-204ENST00000323144 SIT1Q9Y3P8 196 aa13.42□□□□□ -0.26
TPM3-204ENST00000323144 PTPRDP23468 1912 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 FRYLO94915 3013 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 A0A087X0B3 334 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 MTMR11A4FU01 709 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 SHISA7A6NL88 538 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 ECI2O75521 394 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 PPP1R37O75864 691 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 MYL4P12829 197 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 PTPN2P17706 415 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 TARSP26639 723 aaKnown RBP13.41□□□□□ -0.26
TPM3-204ENST00000323144 ACOT2P49753 483 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 CASP5P51878 434 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 GTF2BQ00403 316 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 CEBPZQ03701 1054 aaKnown RBP13.41□□□□□ -0.26
TPM3-204ENST00000323144 TMEM132DQ14C87 1099 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 STXBP5Q5T5C0 1151 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 SPATA1Q5VX52 437 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 TPGS2Q68CL5 300 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 RTL10Q7L3V2 364 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 MAML2Q8IZL2 1156 aaPredicted RBP13.41□□□□□ -0.26
TPM3-204ENST00000323144 ZSWIM2Q8NEG5 633 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 SHKBP1Q8TBC3 707 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 ZSWIM3Q96MP5 696 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 CCSER1Q9C0I3 900 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 LTB4R2Q9NPC1 389 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 HEBP1Q9NRV9 189 aa13.41□□□□□ -0.26
TPM3-204ENST00000323144 MYO16Q9Y6X6 1858 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 DCHS1Q96JQ0 3298 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 KANSL1LA0AUZ9 987 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 ADRB2P07550 413 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 CYP3A5P20815 502 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 SYT1P21579 422 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 DDIT3P35638 169 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 EPHA5P54756 1037 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 KCNA1Q09470 495 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 TEAD2Q15562 447 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 C9orf57Q5W0N0 161 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 OVOS1Q6IE37 1185 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 VITQ6UXI7 678 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 DSTYKQ6XUX3 929 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 ELSPBP1Q96BH3 223 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 RSPRY1Q96DX4 576 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 ASB16Q96NS5 453 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 USP28Q96RU2 1077 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 ZNF334Q9HCZ1 680 aaPredicted RBP13.4□□□□□ -0.26
TPM3-204ENST00000323144 ASAH2Q9NR71 780 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 GDE1Q9NZC3 331 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 TBC1D7Q9P0N9 293 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 STK17AQ9UEE5 414 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 GVINP1Q7Z2Y8 2422 aa13.4□□□□□ -0.26
TPM3-204ENST00000323144 MYMKA6NI61 221 aa13.39□□□□□ -0.27
TPM3-204ENST00000323144 OAZ2O95190 189 aa13.39□□□□□ -0.27
TPM3-204ENST00000323144 SP9P0CG40 484 aa13.39□□□□□ -0.27
TPM3-204ENST00000323144 ODC1P11926 461 aa13.39□□□□□ -0.27
TPM3-204ENST00000323144 VIPR2P41587 438 aa13.39□□□□□ -0.27
TPM3-204ENST00000323144 PRKCQQ04759 706 aa13.39□□□□□ -0.27
TPM3-204ENST00000323144 SLC44A4Q53GD3 710 aa13.39□□□□□ -0.27
TPM3-204ENST00000323144 CRELD2Q6UXH1 353 aaPredicted RBP13.39□□□□□ -0.27
TPM3-204ENST00000323144 ADSSL1Q8N142 457 aa13.39□□□□□ -0.27
TPM3-204ENST00000323144 ELMOD1Q8N336 334 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms