RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 MTMR12Q9C0I1 747 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 VTA1Q9NP79 307 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 GPRC5DQ9NZD1 345 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 NAGPAQ9UK23 515 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 FOXN3O00409 490 aaPredicted RBP13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 AKAP3O75969 853 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 SEZ6Q53EL9 994 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 UBA3Q8TBC4 463 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 ATP6V1G3Q96LB4 118 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 PPP1R12CQ9BZL4 782 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 RSAD1Q9HA92 442 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 FIS1Q9Y3D6 152 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 FRMPD4Q14CM0 1322 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 MAPK13O15264 365 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 SLC8A1P32418 973 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 DEUP1Q05D60 604 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 ZNF235Q14590 738 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 STAT4Q14765 748 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 LY6KQ17RY6 165 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 MAP1SQ66K74 1059 aaPredicted RBP13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 ARHGEF26Q96DR7 871 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 SPON2Q9BUD6 331 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 KIAA1257Q9ULG3 409 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 TRAF3IP3Q9Y228 551 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 PCDHB7Q9Y5E2 793 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 F5H423 210 aaPredicted RBP13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 BAG2O95816 211 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 ALDH1A1P00352 501 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 FGRP09769 529 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 ODC1P11926 461 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 LAMTOR4Q0VGL1 99 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 NAA30Q147X3 362 aaPredicted RBP13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 AP1ARQ63HQ0 302 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 NALCNQ8IZF0 1738 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 PCSK9Q8NBP7 692 aaKnown RBP13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 SPIRE2Q8WWL2 714 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 MAML1Q92585 1016 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 OSBPL8Q9BZF1 889 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 FAM96AQ9H5X1 160 aa13.5□□□□□ -0.25
SH3PXD2A-201ENST00000315994 VTNP04004 478 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 STAG3L1P0CL83 205 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 CYP2C8P10632 490 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 OR1G1P47890 313 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 CENPCQ03188 943 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 EPC2Q52LR7 807 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 RRAGCQ9HB90 399 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 METTL5Q9NRN9 209 aaKnown RBP13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 EEF2KO00418 725 aaKnown RBP13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 PSMD3O43242 534 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 PLEKP08567 350 aaPredicted RBP13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 MAPRE1Q15691 268 aaKnown RBP13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 TRIM67Q6ZTA4 783 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 NUDT18Q6ZVK8 323 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 WDR75Q8IWA0 830 aaKnown RBP13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 CNPY4Q8N129 248 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 C1orf131Q8NDD1 294 aaKnown RBP13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 TPCN2Q8NHX9 752 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 TRIM55Q9BYV6 548 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 THAP2Q9H0W7 228 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 ACTR5Q9H9F9 607 aaPredicted RBP13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 PIK3CDO00329 1044 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 SGPL1O95470 568 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 CACNB2Q08289 660 aaPredicted RBP13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 PPIL2Q13356 520 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 PDCLQ13371 301 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 DRP2Q13474 957 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 VGLL4Q14135 290 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 E2F4Q16254 413 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 P3H1Q32P28 736 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 CATSPERGQ6ZRH7 1159 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 NYAP1Q6ZVC0 841 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 USP38Q8NB14 1042 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 TTC8Q8TAM2 541 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 VPS11Q9H270 941 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 RBM12Q9NTZ6 932 aaKnown RBP13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 FAM200BP0CF97 657 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 COPS2P61201 443 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 KLHL29Q96CT2 875 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 FAM8A1Q9UBU6 413 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 ADAM21Q9UKJ8 722 aa13.49□□□□□ -0.25
SH3PXD2A-201ENST00000315994 H3BRB1 525 aa13.48□□□□□ -0.25
SH3PXD2A-201ENST00000315994 DCTN3O75935 186 aa13.48□□□□□ -0.25
SH3PXD2A-201ENST00000315994 GCKP35557 465 aa13.48□□□□□ -0.25
SH3PXD2A-201ENST00000315994 BYSLQ13895 437 aaKnown RBP13.48□□□□□ -0.25
SH3PXD2A-201ENST00000315994 KIZQ2M2Z5 673 aa13.48□□□□□ -0.25
SH3PXD2A-201ENST00000315994 HP1BP3Q5SSJ5 553 aaPredicted RBP13.48□□□□□ -0.25
SH3PXD2A-201ENST00000315994 REXO1L1PQ8IX06 675 aa13.48□□□□□ -0.25
SH3PXD2A-201ENST00000315994 RAPGEF5Q92565 580 aa13.48□□□□□ -0.25
SH3PXD2A-201ENST00000315994 TRIM51Q9BSJ1 452 aa13.48□□□□□ -0.25
SH3PXD2A-201ENST00000315994 TUT1Q9H6E5 874 aaKnown RBP13.48□□□□□ -0.25
SH3PXD2A-201ENST00000315994 PHLPP1O60346 1717 aa13.48□□□□□ -0.25
SH3PXD2A-201ENST00000315994 GRAP2O75791 330 aa13.48□□□□□ -0.25
SH3PXD2A-201ENST00000315994 BRAFP15056 766 aa13.48□□□□□ -0.25
SH3PXD2A-201ENST00000315994 FAM133BQ5BKY9 247 aaKnown RBP13.48□□□□□ -0.25
SH3PXD2A-201ENST00000315994 TPX2Q9ULW0 747 aaKnown RBP13.48□□□□□ -0.25
SH3PXD2A-201ENST00000315994 A0A087X0B3 334 aa13.48□□□□□ -0.25
SH3PXD2A-201ENST00000315994 TTC4O95801 387 aa13.48□□□□□ -0.25
SH3PXD2A-201ENST00000315994 HOXC6P09630 235 aa13.48□□□□□ -0.25
SH3PXD2A-201ENST00000315994 VDRP11473 427 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms