RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 APOBEC3FQ8IUX4 373 aaKnown RBP11.34□□□□□ -0.59
MUC4-201ENST00000308466 MAP4K3Q8IVH8 894 aa11.34□□□□□ -0.59
MUC4-201ENST00000308466 PRELID2Q8N945 189 aa11.34□□□□□ -0.59
MUC4-201ENST00000308466 SEC16BQ96JE7 1060 aa11.34□□□□□ -0.59
MUC4-201ENST00000308466 PARVAQ9NVD7 372 aa11.34□□□□□ -0.59
MUC4-201ENST00000308466 SHBGP04278 402 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 MAPTP10636 758 aaKnown RBP11.33□□□□□ -0.6
MUC4-201ENST00000308466 ARSEP51690 589 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 PSMC1P62191 440 aaKnown RBP11.33□□□□□ -0.6
MUC4-201ENST00000308466 PPATQ06203 517 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 CUL2Q13617 745 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 FAM71AQ8IYT1 594 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 TMC2Q8TDI7 906 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 CLEC4DQ8WXI8 215 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 SEPT1Q8WYJ6 367 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 TRIM7Q9C029 511 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 C17orf75Q9HAS0 396 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 SPAG7O75391 227 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 PRKCBP05771 671 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 SUPT20HL2P0C7V6 817 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 ABCD1P33897 745 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 GPC3P51654 580 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 YWHAGP61981 247 aaKnown RBP eCLIP11.33□□□□□ -0.6
MUC4-201ENST00000308466 FMO1Q01740 532 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 SMTNL2Q2TAL5 461 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 CYP4A22Q5TCH4 519 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 PRPF31Q8WWY3 499 aaKnown RBP11.33□□□□□ -0.6
MUC4-201ENST00000308466 SPATA33Q96N06 139 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 ADPGKQ9BRR6 497 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 ELP3Q9H9T3 547 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 NGRNQ9NPE2 291 aaKnown RBP11.33□□□□□ -0.6
MUC4-201ENST00000308466 CHCHD3Q9NX63 227 aaKnown RBP11.33□□□□□ -0.6
MUC4-201ENST00000308466 DOCK2Q92608 1830 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 TCRBV7S2A1N4TA0A589 114 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 TBC1D12O60347 775 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 P4HA1P13674 534 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 TNFRSF8P28908 595 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 P3H1Q32P28 736 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 C11orf63Q6NUN7 778 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 C1orf131Q8NDD1 294 aaKnown RBP11.33□□□□□ -0.6
MUC4-201ENST00000308466 RDM1Q8NG50 284 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 B4GALNT2Q8NHY0 566 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 KCNV2Q8TDN2 545 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 NSMCE1Q8WV22 266 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 SHC3Q92529 594 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 ITFG2Q969R8 447 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 HVCN1Q96D96 273 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 CFAP57Q96MR6 1250 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 SMC6Q96SB8 1091 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 SLC40A1Q9NP59 571 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 CHST7Q9NS84 486 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 IP6K2Q9UHH9 426 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 USH1CQ9Y6N9 552 aa11.33□□□□□ -0.6
MUC4-201ENST00000308466 SYNJ2BP-COX16A0A087WUM0 186 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 PGK2P07205 417 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 ITIH2P19823 946 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 GARTP22102 1010 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 SLC1A1P43005 524 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 GPAT2Q6NUI2 795 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 XRRA1Q6P2D8 792 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 CASC4Q6P4E1 433 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 ARHGEF18Q6ZSZ5 1173 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 TRIM50Q86XT4 487 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 NLRP7Q8WX94 980 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 BSNDQ8WZ55 320 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 RBM41Q96IZ5 413 aaKnown RBP11.32□□□□□ -0.6
MUC4-201ENST00000308466 RBM15Q96T37 977 aaKnown RBP eCLIP11.32□□□□□ -0.6
MUC4-201ENST00000308466 MTMR12Q9C0I1 747 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 COX16Q9P0S2 106 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 BCORQ6W2J9 1755 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 TCP11X1B4DZS4 312 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 TCF7P36402 384 aaPredicted RBP11.32□□□□□ -0.6
MUC4-201ENST00000308466 SKOR1P84550 965 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 IL9RQ01113 521 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 CLEC16AQ2KHT3 1053 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 TRIM72Q6ZMU5 477 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 ANKMY2Q8IV38 441 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 ZBED8Q8IZ13 594 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 MCOLN2Q8IZK6 566 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 PYROXD1Q8WU10 500 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 CRYGNQ8WXF5 182 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 P3H4Q92791 437 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 MAP3K20Q9NYL2 800 aaKnown RBP11.32□□□□□ -0.6
MUC4-201ENST00000308466 ATRNL1Q5VV63 1379 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.32□□□□□ -0.6
MUC4-201ENST00000308466 KIAA0391O15091 583 aaKnown RBP11.32□□□□□ -0.6
MUC4-201ENST00000308466 AGTP01019 485 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 CALB1P05937 261 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 DSG3P32926 999 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 DARS2Q6PI48 645 aaKnown RBP11.32□□□□□ -0.6
MUC4-201ENST00000308466 C3orf20Q8ND61 904 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 LRRC8CQ8TDW0 803 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 KLHL29Q96CT2 875 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 WNK4Q96J92 1243 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 SENP7Q9BQF6 1050 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 DDX23Q9BUQ8 820 aaKnown RBP11.32□□□□□ -0.6
MUC4-201ENST00000308466 FAM49AQ9H0Q0 323 aaPredicted RBP11.32□□□□□ -0.6
MUC4-201ENST00000308466 CDC42EP4Q9H3Q1 356 aaKnown RBP11.32□□□□□ -0.6
MUC4-201ENST00000308466 PCDHA3Q9Y5H8 950 aa11.32□□□□□ -0.6
MUC4-201ENST00000308466 ZMYM2Q9UBW7 1377 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms