RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 RIN2Q8WYP3 895 aaPredicted RBP6.99□□□□□ -1.29
USP47-201ENST00000305481 TFAP2BQ92481 460 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 KAT2BQ92831 832 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 WNT8AQ9H1J5 351 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 SETD4Q9NVD3 440 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 POLIQ9UNA4 740 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 ZNF236Q9UL36 1845 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 A6NJR5 290 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 TTI1O43156 1089 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 DYNC1LI2O43237 492 aaPredicted RBP6.98□□□□□ -1.29
USP47-201ENST00000305481 MCF2P10911 925 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 FGFR4P22455 802 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 NSFP46459 744 aaKnown RBP6.98□□□□□ -1.29
USP47-201ENST00000305481 CCL14Q16627 93 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 ZNF394Q53GI3 561 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 DAB2IPQ5VWQ8 1189 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 OLFML2BQ68BL8 750 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 JADE1Q6IE81 842 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 WDTC1Q8N5D0 677 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 UBL4BQ8N7F7 174 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 C11orf70Q9BRQ4 267 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 IMPG2Q9BZV3 1241 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 CXCL16Q9H2A7 254 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 SLITRK6Q9H5Y7 841 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 RPF1Q9H9Y2 349 aaKnown RBP6.98□□□□□ -1.29
USP47-201ENST00000305481 ANAPC7Q9UJX3 599 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 A0A1B0GUA9 196 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 CLSTN1O94985 981 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 TMEM191BP0C7N4 346 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 ZNF865P0CJ78 1059 aaPredicted RBP6.98□□□□□ -1.29
USP47-201ENST00000305481 MYBL1P10243 752 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 TMOD1P28289 359 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 GGCXP38435 758 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 MAP2K5Q13163 448 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 MAMLD1Q13495 774 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 TRPC3Q13507 836 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 ZNF699Q32M78 642 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 SCARA5Q6ZMJ2 495 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 TRIM72Q6ZMU5 477 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 MMS22LQ6ZRQ5 1243 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 NLRP7Q8WX94 980 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 SEC14L1Q92503 715 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 USP6NLQ92738 828 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 SDCBP2Q9H190 292 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 NEUROG2Q9H2A3 272 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 ADAMTS10Q9H324 1103 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 CDHR5Q9HBB8 845 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 BRCA2P51587 3418 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 CCDC66A2RUB6 948 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 O00370 1275 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 SPOPO43791 374 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 IL18RAPO95256 599 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 GJB6O95452 261 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 TNNC2P02585 160 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 CYP2C19P33261 490 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 RAP1GAPP47736 663 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 ZNF157P51786 506 aaPredicted RBP6.98□□□□□ -1.29
USP47-201ENST00000305481 TMEM62Q0P6H9 643 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 SIX1Q15475 284 aaPredicted RBP6.98□□□□□ -1.29
USP47-201ENST00000305481 PLEKHA7Q6IQ23 1121 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 PRELID2Q8N945 189 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 CCDC102AQ96A19 550 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 ANKRD36BP1Q96IX9 119 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 ADAM22Q9P0K1 906 aa6.98□□□□□ -1.29
USP47-201ENST00000305481 TCRBV5S1A1TA0A578 114 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 ZEB2O60315 1214 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 GPR32O75388 356 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 IGHA2P01877 340 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 MMP8P22894 467 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 HOXA11P31270 313 aaPredicted RBP6.97□□□□□ -1.29
USP47-201ENST00000305481 GUCY2FP51841 1108 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 CDH8P55286 799 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 PAK2Q13177 524 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 NNTQ13423 1086 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 KIZQ2M2Z5 673 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 TTC27Q6P3X3 843 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 PIK3R5Q8WYR1 880 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 VCPIP1Q96JH7 1222 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 BCO2Q9BYV7 579 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 NXF1Q9UBU9 619 aaKnown RBP6.97□□□□□ -1.29
USP47-201ENST00000305481 FAN1Q9Y2M0 1017 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 DAPK3O43293 454 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 F2P00734 622 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 ITGB3P05106 788 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 KRT19P08727 400 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 SMIM10L2AP0DMW4 78 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 SMIM10L2BP0DMW5 78 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 PTGIRP43119 386 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 WDR72Q3MJ13 1102 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 C17orf99Q6UX52 265 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 EIF1ADQ8N9N8 165 aaKnown RBP6.97□□□□□ -1.29
USP47-201ENST00000305481 WHAMMQ8TF30 809 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 C18orf8Q96DM3 657 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 TRIM11Q96F44 468 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 NAP1L3Q99457 506 aaPredicted RBP6.97□□□□□ -1.29
USP47-201ENST00000305481 HERPUD2Q9BSE4 406 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 TRIM51Q9BSJ1 452 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 CEP350Q5VT06 3117 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 PROSCO94903 275 aa6.97□□□□□ -1.29
USP47-201ENST00000305481 FLT3P36888 993 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms