RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 BBOX1O75936 387 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 QRICH1Q2TAL8 776 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 ANKS3Q6ZW76 656 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 RCOR2Q8IZ40 523 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 MCPH1Q8NEM0 835 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 SESN1Q9Y6P5 492 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 CYP2C19P33261 490 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 DAB2IPQ5VWQ8 1189 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 RCSD1Q6JBY9 416 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 CCDC60Q8IWA6 550 aaPredicted RBP16.89■□□□□ 0.29
SSRP1-202ENST00000293880 RANBP17Q9H2T7 1088 aaKnown RBP16.89■□□□□ 0.29
SSRP1-202ENST00000293880 ZNF556Q9HAH1 456 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 ERBB3P21860 1342 aa16.89■□□□□ 0.29
SSRP1-202ENST00000293880 KLHL18O94889 574 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 KIF2CQ99661 725 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 MRGBPQ9NV56 204 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 PKP3Q9Y446 797 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 MAGI3Q5TCQ9 1506 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 NCF1BA6NI72 391 aaPredicted RBP16.88■□□□□ 0.29
SSRP1-202ENST00000293880 NCF1CA8MVU1 366 aaPredicted RBP16.88■□□□□ 0.29
SSRP1-202ENST00000293880 WEE2P0C1S8 567 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 NCF1P14598 390 aaPredicted RBP16.88■□□□□ 0.29
SSRP1-202ENST00000293880 SLC16A1P53985 500 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 TTC39BQ5VTQ0 682 aaPredicted RBP16.88■□□□□ 0.29
SSRP1-202ENST00000293880 PI4K2AQ9BTU6 479 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 CAAP1Q9H8G2 361 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 PIDD1Q9HB75 910 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 ERVK-7P63135 1459 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 SAMD9LQ8IVG5 1584 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 PVALEFA0A1B0GWK0 134 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 AKT1P31749 480 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 SRBD1Q8N5C6 995 aaKnown RBP16.88■□□□□ 0.29
SSRP1-202ENST00000293880 EFHBQ8N7U6 833 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 IGSF1Q8N6C5 1336 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 ZC3H4Q9UPT8 1303 aaKnown RBP16.88■□□□□ 0.29
SSRP1-202ENST00000293880 PARNO95453 639 aaKnown RBP16.88■□□□□ 0.29
SSRP1-202ENST00000293880 ZC2HC1CQ53FD0 456 aaPredicted RBP16.88■□□□□ 0.29
SSRP1-202ENST00000293880 MROH9Q5TGP6 573 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 TUBGCP3Q96CW5 907 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 HES6Q96HZ4 224 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 TRIM54Q9BYV2 358 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 TJP2Q9UDY2 1190 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 FHOD1Q9Y613 1164 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 EEF2KO00418 725 aaKnown RBP16.88■□□□□ 0.29
SSRP1-202ENST00000293880 SMIM5Q71RC9 77 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 LUZP2Q86TE4 346 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 SPATA2LQ8IUW3 424 aaPredicted RBP16.88■□□□□ 0.29
SSRP1-202ENST00000293880 SENP7Q9BQF6 1050 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 MANSC1Q9H8J5 431 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 SELENONQ9NZV5 590 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 MCM8Q9UJA3 840 aa16.88■□□□□ 0.29
SSRP1-202ENST00000293880 GPSM2P81274 684 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 TTC23LQ6PF05 361 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 ATPAF2Q8N5M1 289 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 TTC37Q6PGP7 1564 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 LSP1P33241 339 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 GALCP54803 685 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 MAP3K10Q02779 954 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 MRPS26Q9BYN8 205 aaKnown RBP16.87■□□□□ 0.29
SSRP1-202ENST00000293880 LCMT1Q9UIC8 334 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 NNMTP40261 264 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 EN1Q05925 392 aaPredicted RBP16.87■□□□□ 0.29
SSRP1-202ENST00000293880 ORC1Q13415 861 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 C3orf62Q6ZUJ4 267 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 RNF149Q8NC42 400 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 DCP1AQ9NPI6 582 aaPredicted RBP16.87■□□□□ 0.29
SSRP1-202ENST00000293880 METTL5Q9NRN9 209 aaKnown RBP16.87■□□□□ 0.29
SSRP1-202ENST00000293880 M0R3G1 203 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 ACTR2P61160 394 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 PRPF18Q99633 342 aaKnown RBP16.87■□□□□ 0.29
SSRP1-202ENST00000293880 MUC3BQ9H195 1237 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 PIN4Q9Y237 131 aaKnown RBP16.87■□□□□ 0.29
SSRP1-202ENST00000293880 NFKBIAP25963 317 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 FRMD5Q7Z6J6 570 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 ZNF786Q8N393 782 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 C1orf131Q8NDD1 294 aaKnown RBP16.87■□□□□ 0.29
SSRP1-202ENST00000293880 SPIRE2Q8WWL2 714 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 TMEM245Q9H330 911 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 PNMA8BQ9ULN7 279 aaPredicted RBP16.87■□□□□ 0.29
SSRP1-202ENST00000293880 MINPP1Q9UNW1 487 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 MROH7-TTC4A0A0A0MT08 1334 aa16.87■□□□□ 0.29
SSRP1-202ENST00000293880 KCNJ1P48048 391 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 LRIG3Q6UXM1 1119 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 FAM71DQ8N9W8 422 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 IPMKQ8NFU5 416 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 GFM2Q969S9 779 aaKnown RBP16.86■□□□□ 0.29
SSRP1-202ENST00000293880 PABPC5Q96DU9 382 aaKnown RBP16.86■□□□□ 0.29
SSRP1-202ENST00000293880 TBC1D22BQ9NU19 505 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 CLASP1Q7Z460 1538 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 TPST1O60507 370 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 NUDT2P50583 147 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 CHSY1Q86X52 802 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 DGKHQ86XP1 1220 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 OTUB1Q96FW1 271 aaPredicted RBP16.86■□□□□ 0.29
SSRP1-202ENST00000293880 REEP2Q9BRK0 252 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 COA1Q9GZY4 146 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 HERC5Q9UII4 1024 aaKnown RBP16.86■□□□□ 0.29
SSRP1-202ENST00000293880 PALLDQ8WX93 1383 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 FAM47DPA6NHR8 397 aa16.86■□□□□ 0.29
SSRP1-202ENST00000293880 AGRPO00253 132 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms