RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 HCFC1R1Q9NWW0 138 aa17.43■□□□□ 0.38
USE1-201ENST00000263897 RCOR1Q9UKL0 485 aa17.43■□□□□ 0.38
USE1-201ENST00000263897 CDH7Q9ULB5 785 aa17.43■□□□□ 0.38
USE1-201ENST00000263897 MAFFQ9ULX9 164 aa17.43■□□□□ 0.38
USE1-201ENST00000263897 PCDHA7Q9UN72 937 aa17.43■□□□□ 0.38
USE1-201ENST00000263897 DUSP12Q9UNI6 340 aa17.43■□□□□ 0.38
USE1-201ENST00000263897 C2CD2Q9Y426 696 aa17.43■□□□□ 0.38
USE1-201ENST00000263897 ANHXE9PGG2 379 aa17.42■□□□□ 0.38
USE1-201ENST00000263897 PRRG1O14668 218 aa17.42■□□□□ 0.38
USE1-201ENST00000263897 LDHAP00338 332 aaKnown RBP17.42■□□□□ 0.38
USE1-201ENST00000263897 PTPN2P17706 415 aa17.42■□□□□ 0.38
USE1-201ENST00000263897 TYMPP19971 482 aa17.42■□□□□ 0.38
USE1-201ENST00000263897 GARTP22102 1010 aa17.42■□□□□ 0.38
USE1-201ENST00000263897 PABPC1LQ4VXU2 614 aaKnown RBP17.42■□□□□ 0.38
USE1-201ENST00000263897 CNNM4Q6P4Q7 775 aa17.42■□□□□ 0.38
USE1-201ENST00000263897 USP37Q86T82 979 aa17.42■□□□□ 0.38
USE1-201ENST00000263897 ITFG1Q8TB96 612 aa17.42■□□□□ 0.38
USE1-201ENST00000263897 FGF13Q92913 245 aa17.42■□□□□ 0.38
USE1-201ENST00000263897 SENP8Q96LD8 212 aa17.42■□□□□ 0.38
USE1-201ENST00000263897 TRIM9Q9C026 710 aa17.42■□□□□ 0.38
USE1-201ENST00000263897 TMEM206Q9H813 350 aa17.42■□□□□ 0.38
USE1-201ENST00000263897 AFF4Q9UHB7 1163 aaKnown RBP17.42■□□□□ 0.38
USE1-201ENST00000263897 KCNH3Q9ULD8 1083 aa17.42■□□□□ 0.38
USE1-201ENST00000263897 SCN1AP35498 2009 aa17.42■□□□□ 0.38
USE1-201ENST00000263897 PIEZO1Q92508 2521 aa17.41■□□□□ 0.38
USE1-201ENST00000263897 SPTLC1O15269 473 aa17.41■□□□□ 0.38
USE1-201ENST00000263897 PRPF6O94906 941 aaKnown RBP17.41■□□□□ 0.38
USE1-201ENST00000263897 IL18RAPO95256 599 aa17.41■□□□□ 0.38
USE1-201ENST00000263897 LRG1P02750 347 aa17.41■□□□□ 0.38
USE1-201ENST00000263897 ME1P48163 572 aa17.41■□□□□ 0.38
USE1-201ENST00000263897 VCPP55072 806 aaKnown RBP17.41■□□□□ 0.38
USE1-201ENST00000263897 DNM1Q05193 864 aaKnown RBP17.41■□□□□ 0.38
USE1-201ENST00000263897 ADCY1Q08828 1119 aa17.41■□□□□ 0.38
USE1-201ENST00000263897 HTR4Q13639 388 aa17.41■□□□□ 0.38
USE1-201ENST00000263897 NT5DC4Q86YG4 428 aa17.41■□□□□ 0.38
USE1-201ENST00000263897 ZSWIM2Q8NEG5 633 aa17.41■□□□□ 0.38
USE1-201ENST00000263897 PRRX2Q99811 253 aa17.41■□□□□ 0.38
USE1-201ENST00000263897 C7orf25Q9BPX7 421 aa17.41■□□□□ 0.38
USE1-201ENST00000263897 FAM213AQ9BRX8 229 aa17.41■□□□□ 0.38
USE1-201ENST00000263897 AVENQ9NQS1 362 aaPredicted RBP17.41■□□□□ 0.38
USE1-201ENST00000263897 DPP3Q9NY33 737 aa17.41■□□□□ 0.38
USE1-201ENST00000263897 OR6C75A6NL08 312 aa17.4■□□□□ 0.38
USE1-201ENST00000263897 POLR2DO15514 142 aaKnown RBP17.4■□□□□ 0.38
USE1-201ENST00000263897 NARSO43776 548 aaKnown RBP17.4■□□□□ 0.38
USE1-201ENST00000263897 CPB1P15086 417 aa17.4■□□□□ 0.38
USE1-201ENST00000263897 RESP18Q5W5W9 173 aa17.4■□□□□ 0.38
USE1-201ENST00000263897 OVOS1Q6IE37 1185 aa17.4■□□□□ 0.38
USE1-201ENST00000263897 RNF19BQ6ZMZ0 732 aa17.4■□□□□ 0.38
USE1-201ENST00000263897 STXBP4Q6ZWJ1 553 aa17.4■□□□□ 0.38
USE1-201ENST00000263897 EFCAB13Q8IY85 973 aa17.4■□□□□ 0.38
USE1-201ENST00000263897 HPS3Q969F9 1004 aa17.4■□□□□ 0.38
USE1-201ENST00000263897 SAAL1Q96ER3 474 aa17.4■□□□□ 0.38
USE1-201ENST00000263897 FAM13BQ9NYF5 915 aa17.4■□□□□ 0.38
USE1-201ENST00000263897 WNT16Q9UBV4 365 aa17.4■□□□□ 0.38
USE1-201ENST00000263897 INSL5Q9Y5Q6 135 aa17.4■□□□□ 0.38
USE1-201ENST00000263897 CACNA1HO95180 2353 aa17.4■□□□□ 0.38
USE1-201ENST00000263897 RHOP08100 348 aa17.39■□□□□ 0.37
USE1-201ENST00000263897 SRFP11831 508 aa17.39■□□□□ 0.37
USE1-201ENST00000263897 ODC1P11926 461 aa17.39■□□□□ 0.37
USE1-201ENST00000263897 ASIC1P78348 528 aa17.39■□□□□ 0.37
USE1-201ENST00000263897 GPR17Q13304 367 aa17.39■□□□□ 0.37
USE1-201ENST00000263897 PARM1Q6UWI2 310 aa17.39■□□□□ 0.37
USE1-201ENST00000263897 BRSK2Q8IWQ3 736 aa17.39■□□□□ 0.37
USE1-201ENST00000263897 GLIS3Q8NEA6 775 aa17.39■□□□□ 0.37
USE1-201ENST00000263897 ST13P5Q8NFI4 369 aaPredicted RBP17.39■□□□□ 0.37
USE1-201ENST00000263897 CBWD1Q9BRT8 395 aa17.39■□□□□ 0.37
USE1-201ENST00000263897 RPP25Q9BUL9 199 aaKnown RBP17.39■□□□□ 0.37
USE1-201ENST00000263897 MFSD1Q9H3U5 465 aa17.39■□□□□ 0.37
USE1-201ENST00000263897 PCIF1Q9H4Z3 704 aa17.39■□□□□ 0.37
USE1-201ENST00000263897 MAGEF1Q9HAY2 307 aa17.39■□□□□ 0.37
USE1-201ENST00000263897 FBXL21Q9UKT6 434 aa17.39■□□□□ 0.37
USE1-201ENST00000263897 MRPS23Q9Y3D9 190 aaKnown RBP17.39■□□□□ 0.37
USE1-201ENST00000263897 NUMBLQ9Y6R0 609 aa17.39■□□□□ 0.37
USE1-201ENST00000263897 KMT2EQ8IZD2 1858 aa17.39■□□□□ 0.37
USE1-201ENST00000263897 GOLGA8IPA6NC78 632 aa17.38■□□□□ 0.37
USE1-201ENST00000263897 GOLGA8JA6NMD2 632 aa17.38■□□□□ 0.37
USE1-201ENST00000263897 KIAA0391O15091 583 aaKnown RBP17.38■□□□□ 0.37
USE1-201ENST00000263897 EXTL3O43909 919 aa17.38■□□□□ 0.37
USE1-201ENST00000263897 CYP11A1P05108 521 aa17.38■□□□□ 0.37
USE1-201ENST00000263897 OR4Q2P0C623 313 aa17.38■□□□□ 0.37
USE1-201ENST00000263897 HOXD13P35453 343 aa17.38■□□□□ 0.37
USE1-201ENST00000263897 TAF6P49848 677 aa17.38■□□□□ 0.37
USE1-201ENST00000263897 CLCN5P51795 746 aa17.38■□□□□ 0.37
USE1-201ENST00000263897 NUBP1P53384 320 aa17.38■□□□□ 0.37
USE1-201ENST00000263897 WNT7BP56706 349 aa17.38■□□□□ 0.37
USE1-201ENST00000263897 MYBPC2Q14324 1141 aa17.38■□□□□ 0.37
USE1-201ENST00000263897 SLC5A9Q2M3M2 681 aa17.38■□□□□ 0.37
USE1-201ENST00000263897 ASTLQ6HA08 431 aaPredicted RBP17.38■□□□□ 0.37
USE1-201ENST00000263897 NPAS3Q8IXF0 933 aa17.38■□□□□ 0.37
USE1-201ENST00000263897 PRSS33Q8NF86 280 aa17.38■□□□□ 0.37
USE1-201ENST00000263897 ZNF507Q8TCN5 953 aa17.38■□□□□ 0.37
USE1-201ENST00000263897 FGF14Q92915 247 aa17.38■□□□□ 0.37
USE1-201ENST00000263897 BORCS6Q96GS4 357 aa17.38■□□□□ 0.37
USE1-201ENST00000263897 ZNF512Q96ME7 567 aaPredicted RBP17.38■□□□□ 0.37
USE1-201ENST00000263897 CORO1BQ9BR76 489 aa17.38■□□□□ 0.37
USE1-201ENST00000263897 ZDHHC9Q9Y397 364 aa17.38■□□□□ 0.37
USE1-201ENST00000263897 CYB561D2O14569 222 aa17.37■□□□□ 0.37
USE1-201ENST00000263897 EIF3DO15371 548 aaKnown RBP eCLIP17.37■□□□□ 0.37
USE1-201ENST00000263897 VNN2O95498 520 aa17.37■□□□□ 0.37
USE1-201ENST00000263897 CFHP08603 1231 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms