RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 OVOS1Q6IE37 1185 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 RNF19BQ6ZMZ0 732 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 CD302Q8IX05 232 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 CSGALNACT1Q8TDX6 532 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 IRF7Q92985 503 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 GCNAQ96QF7 691 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 TSPAN18Q96SJ8 248 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 LTB4R2Q9NPC1 389 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 AVENQ9NQS1 362 aaPredicted RBP13.3□□□□□ -0.28
TRAF4-202ENST00000262396 HEBP1Q9NRV9 189 aa13.3□□□□□ -0.28
TRAF4-202ENST00000262396 R3HCC1Q9Y3T6 440 aaKnown RBP13.3□□□□□ -0.28
TRAF4-202ENST00000262396 PTPRZ1P23471 2315 aaPredicted RBP13.29□□□□□ -0.28
TRAF4-202ENST00000262396 ABLIM1O14639 778 aa13.29□□□□□ -0.28
TRAF4-202ENST00000262396 GDI1P31150 447 aa13.29□□□□□ -0.28
TRAF4-202ENST00000262396 FOXK2Q01167 660 aa13.29□□□□□ -0.28
TRAF4-202ENST00000262396 MRPL58Q14197 206 aaKnown RBP13.29□□□□□ -0.28
TRAF4-202ENST00000262396 TMEM132DQ14C87 1099 aa13.29□□□□□ -0.28
TRAF4-202ENST00000262396 VEPH1Q14D04 833 aa13.29□□□□□ -0.28
TRAF4-202ENST00000262396 SF3A1Q15459 793 aaKnown RBP13.29□□□□□ -0.28
TRAF4-202ENST00000262396 ARHGAP15Q53QZ3 475 aa13.29□□□□□ -0.28
TRAF4-202ENST00000262396 FAM78AQ5JUQ0 283 aa13.29□□□□□ -0.28
TRAF4-202ENST00000262396 SLFN12LQ6IEE8 588 aa13.29□□□□□ -0.28
TRAF4-202ENST00000262396 HS6ST3Q8IZP7 471 aa13.29□□□□□ -0.28
TRAF4-202ENST00000262396 THEM5Q8N1Q8 247 aa13.29□□□□□ -0.28
TRAF4-202ENST00000262396 NOC3LQ8WTT2 800 aaKnown RBP13.29□□□□□ -0.28
TRAF4-202ENST00000262396 LARP4BQ92615 738 aaKnown RBP13.29□□□□□ -0.28
TRAF4-202ENST00000262396 RAD54LQ92698 747 aa13.29□□□□□ -0.28
TRAF4-202ENST00000262396 DNASE1L2Q92874 299 aa13.29□□□□□ -0.28
TRAF4-202ENST00000262396 SMARCD2Q92925 531 aa13.29□□□□□ -0.28
TRAF4-202ENST00000262396 TCEAL4Q96EI5 215 aa13.29□□□□□ -0.28
TRAF4-202ENST00000262396 OSBPL6Q9BZF3 934 aa13.29□□□□□ -0.28
TRAF4-202ENST00000262396 GPR88Q9GZN0 384 aa13.29□□□□□ -0.28
TRAF4-202ENST00000262396 NCDNQ9UBB6 729 aa13.29□□□□□ -0.28
TRAF4-202ENST00000262396 YIPF1Q9Y548 306 aa13.29□□□□□ -0.28
TRAF4-202ENST00000262396 TTC26A0AVF1 554 aa13.28□□□□□ -0.28
TRAF4-202ENST00000262396 MICAL2O94851 1124 aa13.28□□□□□ -0.28
TRAF4-202ENST00000262396 OR4Q2P0C623 313 aa13.28□□□□□ -0.28
TRAF4-202ENST00000262396 GJA1P17302 382 aa13.28□□□□□ -0.28
TRAF4-202ENST00000262396 PSMC3P17980 439 aa13.28□□□□□ -0.28
TRAF4-202ENST00000262396 PAX3P23760 479 aa13.28□□□□□ -0.28
TRAF4-202ENST00000262396 LRPAP1P30533 357 aa13.28□□□□□ -0.28
TRAF4-202ENST00000262396 GUCY2FP51841 1108 aa13.28□□□□□ -0.28
TRAF4-202ENST00000262396 KPNA1P52294 538 aaPredicted RBP13.28□□□□□ -0.28
TRAF4-202ENST00000262396 DUSP4Q13115 394 aa13.28□□□□□ -0.28
TRAF4-202ENST00000262396 ARSHQ5FYA8 562 aa13.28□□□□□ -0.28
TRAF4-202ENST00000262396 JADE1Q6IE81 842 aa13.28□□□□□ -0.28
TRAF4-202ENST00000262396 ITIH5Q86UX2 942 aa13.28□□□□□ -0.28
TRAF4-202ENST00000262396 KIAA2013Q8IYS2 634 aa13.28□□□□□ -0.28
TRAF4-202ENST00000262396 ZSCAN18Q8TBC5 510 aaPredicted RBP13.28□□□□□ -0.28
TRAF4-202ENST00000262396 DEPDC1BQ8WUY9 529 aa13.28□□□□□ -0.28
TRAF4-202ENST00000262396 POMGNT1Q8WZA1 660 aa13.28□□□□□ -0.28
TRAF4-202ENST00000262396 E2F7Q96AV8 911 aa13.28□□□□□ -0.28
TRAF4-202ENST00000262396 SEPT5Q99719 369 aaPredicted RBP13.28□□□□□ -0.28
TRAF4-202ENST00000262396 PLA2G2FQ9BZM2 168 aa13.28□□□□□ -0.28
TRAF4-202ENST00000262396 RAB23Q9ULC3 237 aa13.28□□□□□ -0.28
TRAF4-202ENST00000262396 EXOC7Q9UPT5 735 aa13.28□□□□□ -0.28
TRAF4-202ENST00000262396 MTF2Q9Y483 593 aaPredicted RBP13.28□□□□□ -0.28
TRAF4-202ENST00000262396 M0QZQ0 153 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 TBC1D4O60343 1298 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 OAZ2O95190 189 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 FGF19O95750 216 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 NMT1P30419 496 aaKnown RBP13.27□□□□□ -0.29
TRAF4-202ENST00000262396 DDIT3P35638 169 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 ACOT2P49753 483 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 CEBPZQ03701 1054 aaKnown RBP13.27□□□□□ -0.29
TRAF4-202ENST00000262396 TEAD2Q15562 447 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 ENOX2Q16206 610 aaKnown RBP13.27□□□□□ -0.29
TRAF4-202ENST00000262396 MGAT5BQ3V5L5 792 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 PRSS36Q5K4E3 855 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 RRAGBQ5VZM2 374 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 DYMQ7RTS9 669 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 SYCP3Q8IZU3 236 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 FAM3CQ92520 227 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 RUBCNQ92622 972 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 SENP8Q96LD8 212 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 ASB16Q96NS5 453 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 ATXN3LQ9H3M9 355 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 MRPL44Q9H9J2 332 aaKnown RBP13.27□□□□□ -0.29
TRAF4-202ENST00000262396 DLGAP2Q9P1A6 1054 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 CEP72Q9P209 647 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 FBXO4Q9UKT5 387 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 AGO2Q9UKV8 859 aaKnown RBP13.27□□□□□ -0.29
TRAF4-202ENST00000262396 DSEQ9UL01 958 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 SLC27A5Q9Y2P5 690 aa13.27□□□□□ -0.29
TRAF4-202ENST00000262396 A0A0B4J269 797 aa13.26□□□□□ -0.29
TRAF4-202ENST00000262396 A0A1W2PRU2 124 aa13.26□□□□□ -0.29
TRAF4-202ENST00000262396 IDEP14735 1019 aa13.26□□□□□ -0.29
TRAF4-202ENST00000262396 GLULP15104 373 aa13.26□□□□□ -0.29
TRAF4-202ENST00000262396 TYMPP19971 482 aa13.26□□□□□ -0.29
TRAF4-202ENST00000262396 TARSP26639 723 aaKnown RBP13.26□□□□□ -0.29
TRAF4-202ENST00000262396 VIPR2P41587 438 aa13.26□□□□□ -0.29
TRAF4-202ENST00000262396 TUFMP49411 452 aaKnown RBP13.26□□□□□ -0.29
TRAF4-202ENST00000262396 GPR17Q13304 367 aa13.26□□□□□ -0.29
TRAF4-202ENST00000262396 MYBPC2Q14324 1141 aa13.26□□□□□ -0.29
TRAF4-202ENST00000262396 POSTNQ15063 836 aa13.26□□□□□ -0.29
TRAF4-202ENST00000262396 SPATA1Q5VX52 437 aa13.26□□□□□ -0.29
TRAF4-202ENST00000262396 SV2BQ7L1I2 683 aa13.26□□□□□ -0.29
TRAF4-202ENST00000262396 BORCS6Q96GS4 357 aa13.26□□□□□ -0.29
TRAF4-202ENST00000262396 PYM1Q9BRP8 204 aaKnown RBP13.26□□□□□ -0.29
TRAF4-202ENST00000262396 DDX23Q9BUQ8 820 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms