RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 USP17L19D6RCP7 530 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 USP17L20D6RJB6 530 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 RASA4O43374 803 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 APOEP02649 317 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 SP3Q02447 781 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 RNASELQ05823 741 aaKnown RBP12.51□□□□□ -0.41
CCNA1-201ENST00000255465 USP17L24Q0WX57 530 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 LPIN1Q14693 890 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 TCP11X2Q5H9J9 407 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 PCNX4Q63HM2 1172 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 SNRNP48Q6IEG0 339 aaKnown RBP12.51□□□□□ -0.41
CCNA1-201ENST00000255465 TTC30AQ86WT1 665 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 MB21D1Q8N884 522 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 FAM133AQ8N9E0 248 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 MED30Q96HR3 178 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 NOX5Q96PH1 765 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 PRMT1Q99873 361 aaKnown RBP12.51□□□□□ -0.41
CCNA1-201ENST00000255465 TLR10Q9BXR5 811 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 SLITRK6Q9H5Y7 841 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 TCP11L1Q9NUJ3 509 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 IL20Q9NYY1 176 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 UVRAGQ9P2Y5 699 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 DSEQ9UL01 958 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 TRIM17Q9Y577 477 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 TAF6LQ9Y6J9 622 aa12.51□□□□□ -0.41
CCNA1-201ENST00000255465 MACROD2A1Z1Q3 448 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 DYTNA2CJ06 578 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 RCCD1A6NED2 376 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 A6NJR5 290 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 F5H6K3 240 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 RNF225M0QZC1 329 aaPredicted RBP12.5□□□□□ -0.41
CCNA1-201ENST00000255465 MAPK13O15264 365 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 PSMG1O95456 288 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 ATP5DP30049 168 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 NOVP48745 357 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 NT5C2P49902 561 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 DNM2P50570 870 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 KLRC3Q07444 240 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 TTC23LQ6PF05 361 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 DTHD1Q6ZMT9 781 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 MAMSTRQ6ZN01 415 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 CATSPERGQ6ZRH7 1159 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 ADGRG6Q86SQ4 1221 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 VSIG1Q86XK7 387 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 GRAMD2AQ8IUY3 354 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 LRRC47Q8N1G4 583 aaKnown RBP12.5□□□□□ -0.41
CCNA1-201ENST00000255465 UHMK1Q8TAS1 419 aaKnown RBP12.5□□□□□ -0.41
CCNA1-201ENST00000255465 KRT12Q99456 494 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 P2RX7Q99572 595 aaKnown RBP12.5□□□□□ -0.41
CCNA1-201ENST00000255465 IFIH1Q9BYX4 1025 aaKnown RBP12.5□□□□□ -0.41
CCNA1-201ENST00000255465 SLC7A5P2Q9GIP4 190 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 CNNM2Q9H8M5 875 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 ZSWIM5Q9P217 1185 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 STX8Q9UNK0 236 aa12.5□□□□□ -0.41
CCNA1-201ENST00000255465 FAF1Q9UNN5 650 aaPredicted RBP12.5□□□□□ -0.41
CCNA1-201ENST00000255465 BICDL2A1A5D9 508 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 GOLGA8CPA6NN73 597 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 SOBPA7XYQ1 873 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 E7EWF7 191 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 SPTLC1O15269 473 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 RGS16O15492 202 aaPredicted RBP12.49□□□□□ -0.41
CCNA1-201ENST00000255465 RAD51CO43502 376 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 ADCY3O60266 1144 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 CNOT3O75175 753 aaKnown RBP12.49□□□□□ -0.41
CCNA1-201ENST00000255465 UBTFL6P0CB48 400 aaPredicted RBP12.49□□□□□ -0.41
CCNA1-201ENST00000255465 EEF1GP26641 437 aaKnown RBP12.49□□□□□ -0.41
CCNA1-201ENST00000255465 SERPINB6P35237 376 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 ZNF132P52740 706 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 POLGP54098 1239 aaPredicted RBP12.49□□□□□ -0.41
CCNA1-201ENST00000255465 ERVK-9P63128 1117 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 PPP2R5EQ16537 467 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 FAM209AQ5JX71 171 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 COL13A1Q5TAT6 717 aaPredicted RBP12.49□□□□□ -0.41
CCNA1-201ENST00000255465 MAP3K21Q5TCX8 1036 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 MFSD5Q6N075 450 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 USP38Q8NB14 1042 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 SLC17A8Q8NDX2 589 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 OR2W6PQ8NHA6 318 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 STMN2Q93045 179 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 EPSTI1Q96J88 318 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 PRICKLE1Q96MT3 831 aaPredicted RBP12.49□□□□□ -0.41
CCNA1-201ENST00000255465 INPP4AQ96PE3 977 aaPredicted RBP12.49□□□□□ -0.41
CCNA1-201ENST00000255465 ECSITQ9BQ95 431 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 GID8Q9NWU2 228 aa12.49□□□□□ -0.41
CCNA1-201ENST00000255465 PPP1R3GB7ZBB8 358 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 F8W8V4 182 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 DGKIO75912 1065 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 ZWINTO95229 277 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 UBL4AP11441 157 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 ETS2P15036 469 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 MARCKSP29966 332 aaPredicted RBP12.48□□□□□ -0.41
CCNA1-201ENST00000255465 BCAP31P51572 246 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 GPC3P51654 580 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 UBXN1Q04323 297 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 ZC2HC1CQ53FD0 456 aaPredicted RBP12.48□□□□□ -0.41
CCNA1-201ENST00000255465 KAZNQ674X7 775 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 STOX1Q6ZVD7 989 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 NEK10Q6ZWH5 1172 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 ARHGAP24Q8N264 748 aa12.48□□□□□ -0.41
CCNA1-201ENST00000255465 GABPB2Q8TAK5 448 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms