RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 APPL2Q8NEU8 664 aa24.05■■□□□ 1.44
VTI1B-201ENST00000216456 RTP3Q9BQQ7 232 aa24.05■■□□□ 1.44
VTI1B-201ENST00000216456 KCNH3Q9ULD8 1083 aa24.05■■□□□ 1.44
VTI1B-201ENST00000216456 PDCP20941 246 aa24.04■■□□□ 1.44
VTI1B-201ENST00000216456 CD72P21854 359 aa24.04■■□□□ 1.44
VTI1B-201ENST00000216456 AARSP49588 968 aaKnown RBP eCLIP24.04■■□□□ 1.44
VTI1B-201ENST00000216456 WNT7BP56706 349 aa24.04■■□□□ 1.44
VTI1B-201ENST00000216456 SPATA1Q5VX52 437 aa24.04■■□□□ 1.44
VTI1B-201ENST00000216456 TANGO2Q6ICL3 276 aa24.04■■□□□ 1.44
VTI1B-201ENST00000216456 DSTYKQ6XUX3 929 aa24.04■■□□□ 1.44
VTI1B-201ENST00000216456 DNAJC19Q96DA6 116 aa24.04■■□□□ 1.44
VTI1B-201ENST00000216456 FAM84AQ96KN4 292 aa24.04■■□□□ 1.44
VTI1B-201ENST00000216456 ZSWIM3Q96MP5 696 aa24.04■■□□□ 1.44
VTI1B-201ENST00000216456 MTF2Q9Y483 593 aaPredicted RBP24.04■■□□□ 1.44
VTI1B-201ENST00000216456 MOSPD3O75425 235 aa24.03■■□□□ 1.44
VTI1B-201ENST00000216456 CYP3A5P20815 502 aa24.03■■□□□ 1.44
VTI1B-201ENST00000216456 YWHAHQ04917 246 aaPredicted RBP24.03■■□□□ 1.44
VTI1B-201ENST00000216456 RRAGBQ5VZM2 374 aa24.03■■□□□ 1.44
VTI1B-201ENST00000216456 TPGS2Q68CL5 300 aa24.03■■□□□ 1.44
VTI1B-201ENST00000216456 SCARA3Q6AZY7 606 aa24.03■■□□□ 1.44
VTI1B-201ENST00000216456 ADALQ6DHV7 355 aa24.03■■□□□ 1.44
VTI1B-201ENST00000216456 MTSS1LQ765P7 747 aa24.03■■□□□ 1.44
VTI1B-201ENST00000216456 ZNF720Q7Z2F6 126 aa24.03■■□□□ 1.44
VTI1B-201ENST00000216456 TTC9BQ8N6N2 239 aa24.03■■□□□ 1.44
VTI1B-201ENST00000216456 KRI1Q8N9T8 703 aaKnown RBP24.03■■□□□ 1.44
VTI1B-201ENST00000216456 DLGAP2Q9P1A6 1054 aa24.03■■□□□ 1.44
VTI1B-201ENST00000216456 AFF4Q9UHB7 1163 aaKnown RBP24.03■■□□□ 1.44
VTI1B-201ENST00000216456 SOAT2O75908 522 aa24.02■■□□□ 1.44
VTI1B-201ENST00000216456 OAZ2O95190 189 aa24.02■■□□□ 1.44
VTI1B-201ENST00000216456 FCARP24071 287 aa24.02■■□□□ 1.44
VTI1B-201ENST00000216456 ADSSP30520 456 aa24.02■■□□□ 1.44
VTI1B-201ENST00000216456 NBL1P41271 181 aa24.02■■□□□ 1.44
VTI1B-201ENST00000216456 CASP5P51878 434 aa24.02■■□□□ 1.44
VTI1B-201ENST00000216456 C9orf57Q5W0N0 161 aa24.02■■□□□ 1.44
VTI1B-201ENST00000216456 CRELD2Q6UXH1 353 aaPredicted RBP24.02■■□□□ 1.44
VTI1B-201ENST00000216456 RTL10Q7L3V2 364 aa24.02■■□□□ 1.44
VTI1B-201ENST00000216456 IRF2BPLQ9H1B7 796 aa24.02■■□□□ 1.44
VTI1B-201ENST00000216456 SLC27A5Q9Y2P5 690 aa24.02■■□□□ 1.44
VTI1B-201ENST00000216456 TULP1O00294 542 aaPredicted RBP24.01■■□□□ 1.43
VTI1B-201ENST00000216456 PPP1R37O75864 691 aa24.01■■□□□ 1.43
VTI1B-201ENST00000216456 MYL4P12829 197 aa24.01■■□□□ 1.43
VTI1B-201ENST00000216456 LILRA4P59901 499 aa24.01■■□□□ 1.43
VTI1B-201ENST00000216456 GRM2Q14416 872 aa24.01■■□□□ 1.43
VTI1B-201ENST00000216456 FAM78AQ5JUQ0 283 aa24.01■■□□□ 1.43
VTI1B-201ENST00000216456 FOXD4L5Q5VV16 416 aaPredicted RBP24.01■■□□□ 1.43
VTI1B-201ENST00000216456 PHLDB3Q6NSJ2 640 aa24.01■■□□□ 1.43
VTI1B-201ENST00000216456 FOXD4L4Q8WXT5 416 aaPredicted RBP24.01■■□□□ 1.43
VTI1B-201ENST00000216456 SENP8Q96LD8 212 aa24.01■■□□□ 1.43
VTI1B-201ENST00000216456 STRA6Q9BX79 667 aa24.01■■□□□ 1.43
VTI1B-201ENST00000216456 AVENQ9NQS1 362 aaPredicted RBP24.01■■□□□ 1.43
VTI1B-201ENST00000216456 STK17AQ9UEE5 414 aa24.01■■□□□ 1.43
VTI1B-201ENST00000216456 CCDC39Q9UFE4 941 aa24.01■■□□□ 1.43
VTI1B-201ENST00000216456 AGO2Q9UKV8 859 aaKnown RBP24.01■■□□□ 1.43
VTI1B-201ENST00000216456 SIT1Q9Y3P8 196 aa24.01■■□□□ 1.43
VTI1B-201ENST00000216456 YIPF1Q9Y548 306 aa24.01■■□□□ 1.43
VTI1B-201ENST00000216456 NCANO14594 1321 aa24.01■■□□□ 1.43
VTI1B-201ENST00000216456 PROB1E7EW31 1015 aa24■■□□□ 1.43
VTI1B-201ENST00000216456 DUSP4Q13115 394 aa24■■□□□ 1.43
VTI1B-201ENST00000216456 TMEM132DQ14C87 1099 aa24■■□□□ 1.43
VTI1B-201ENST00000216456 KYAT1Q16773 422 aa24■■□□□ 1.43
VTI1B-201ENST00000216456 SLC44A4Q53GD3 710 aa24■■□□□ 1.43
VTI1B-201ENST00000216456 PDZD4Q76G19 769 aaPredicted RBP24■■□□□ 1.43
VTI1B-201ENST00000216456 GPIHBP1Q8IV16 184 aa24■■□□□ 1.43
VTI1B-201ENST00000216456 EFCAB13Q8IY85 973 aa24■■□□□ 1.43
VTI1B-201ENST00000216456 PDILTQ8N807 584 aa24■■□□□ 1.43
VTI1B-201ENST00000216456 ATAD1Q8NBU5 361 aa24■■□□□ 1.43
VTI1B-201ENST00000216456 BEST2Q8NFU1 509 aa24■■□□□ 1.43
VTI1B-201ENST00000216456 OR10T2Q8NGX3 314 aa24■■□□□ 1.43
VTI1B-201ENST00000216456 DNAJC25Q9H1X3 360 aa24■■□□□ 1.43
VTI1B-201ENST00000216456 ST6GALNAC4Q9H4F1 302 aa24■■□□□ 1.43
VTI1B-201ENST00000216456 STYXL1Q9Y6J8 313 aa24■■□□□ 1.43
VTI1B-201ENST00000216456 ANK1P16157 1881 aa23.99■■□□□ 1.43
VTI1B-201ENST00000216456 PRR23AA6NEV1 266 aa23.99■■□□□ 1.43
VTI1B-201ENST00000216456 K7ELQ4 463 aaPredicted RBP23.99■■□□□ 1.43
VTI1B-201ENST00000216456 PIRO00625 290 aa23.99■■□□□ 1.43
VTI1B-201ENST00000216456 STARD6P59095 220 aa23.99■■□□□ 1.43
VTI1B-201ENST00000216456 SLC39A14Q15043 492 aa23.99■■□□□ 1.43
VTI1B-201ENST00000216456 MLF2Q15773 248 aaPredicted RBP23.99■■□□□ 1.43
VTI1B-201ENST00000216456 OVOS1Q6IE37 1185 aa23.99■■□□□ 1.43
VTI1B-201ENST00000216456 SV2BQ7L1I2 683 aa23.99■■□□□ 1.43
VTI1B-201ENST00000216456 USP37Q86T82 979 aa23.99■■□□□ 1.43
VTI1B-201ENST00000216456 PJA1Q8NG27 643 aa23.99■■□□□ 1.43
VTI1B-201ENST00000216456 SAAL1Q96ER3 474 aa23.99■■□□□ 1.43
VTI1B-201ENST00000216456 INTS4Q96HW7 963 aaKnown RBP23.99■■□□□ 1.43
VTI1B-201ENST00000216456 MRPL44Q9H9J2 332 aaKnown RBP23.99■■□□□ 1.43
VTI1B-201ENST00000216456 GDE1Q9NZC3 331 aa23.99■■□□□ 1.43
VTI1B-201ENST00000216456 TFIP11Q9UBB9 837 aaKnown RBP23.99■■□□□ 1.43
VTI1B-201ENST00000216456 ANO9A1A5B4 782 aa23.98■■□□□ 1.43
VTI1B-201ENST00000216456 SHISA7A6NL88 538 aa23.98■■□□□ 1.43
VTI1B-201ENST00000216456 STX6O43752 255 aa23.98■■□□□ 1.43
VTI1B-201ENST00000216456 IDEP14735 1019 aa23.98■■□□□ 1.43
VTI1B-201ENST00000216456 VIPR2P41587 438 aa23.98■■□□□ 1.43
VTI1B-201ENST00000216456 TEAD2Q15562 447 aa23.98■■□□□ 1.43
VTI1B-201ENST00000216456 GLIS3Q8NEA6 775 aa23.98■■□□□ 1.43
VTI1B-201ENST00000216456 POMGNT1Q8WZA1 660 aa23.98■■□□□ 1.43
VTI1B-201ENST00000216456 HPS3Q969F9 1004 aa23.98■■□□□ 1.43
VTI1B-201ENST00000216456 ZNF512Q96ME7 567 aaPredicted RBP23.98■■□□□ 1.43
VTI1B-201ENST00000216456 R4GN57 208 aa23.98■■□□□ 1.43
VTI1B-201ENST00000216456 MTMR11A4FU01 709 aa23.97■■□□□ 1.43
VTI1B-201ENST00000216456 XPOTO43592 962 aaKnown RBP23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms