RNA–Protein interactions for RNA: ENST00000622934.3

SMIM11B-203, Transcript of small integral membrane protein 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11B, Length 1,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-203ENST00000622934 CDK12Q9NYV4 1490 aaPredicted RBP12.35□□□□□ -0.43
SMIM11B-203ENST00000622934 CCNB3Q8WWL7 1395 aa12.35□□□□□ -0.43
SMIM11B-203ENST00000622934 ECM2O94769 699 aaPredicted RBP12.35□□□□□ -0.43
SMIM11B-203ENST00000622934 SPATA31A6Q5VVP1 1343 aa12.35□□□□□ -0.43
SMIM11B-203ENST00000622934 TXNDC2Q86VQ3 553 aa12.33□□□□□ -0.44
SMIM11B-203ENST00000622934 EID1Q9Y6B2 187 aa12.33□□□□□ -0.44
SMIM11B-203ENST00000622934 UBR1Q8IWV7 1749 aa12.31□□□□□ -0.44
SMIM11B-203ENST00000622934 FGD6Q6ZV73 1430 aa12.31□□□□□ -0.44
SMIM11B-203ENST00000622934 PROSER2Q86WR7 435 aaPredicted RBP12.31□□□□□ -0.44
SMIM11B-203ENST00000622934 SLIT1O75093 1534 aa12.31□□□□□ -0.44
SMIM11B-203ENST00000622934 MSH6P52701 1360 aa12.3□□□□□ -0.44
SMIM11B-203ENST00000622934 LRP6O75581 1613 aa12.3□□□□□ -0.44
SMIM11B-203ENST00000622934 ERVK-7P63135 1459 aa12.3□□□□□ -0.44
SMIM11B-203ENST00000622934 ARHGAP23Q9P227 1491 aa12.3□□□□□ -0.44
SMIM11B-203ENST00000622934 LTKP29376 864 aa12.3□□□□□ -0.44
SMIM11B-203ENST00000622934 MAP3K1Q13233 1512 aa12.3□□□□□ -0.44
SMIM11B-203ENST00000622934 FYCO1Q9BQS8 1478 aa12.29□□□□□ -0.44
SMIM11B-203ENST00000622934 MBD5Q9P267 1494 aa12.29□□□□□ -0.44
SMIM11B-203ENST00000622934 KCNA6P17658 529 aa12.29□□□□□ -0.44
SMIM11B-203ENST00000622934 MIER1Q8N108 512 aa12.29□□□□□ -0.44
SMIM11B-203ENST00000622934 SLAIN2Q9P270 581 aa12.29□□□□□ -0.44
SMIM11B-203ENST00000622934 ZRANB1Q9UGI0 708 aa12.29□□□□□ -0.44
SMIM11B-203ENST00000622934 BBXQ8WY36 941 aaPredicted RBP12.28□□□□□ -0.44
SMIM11B-203ENST00000622934 COL16A1Q07092 1604 aaPredicted RBP12.28□□□□□ -0.44
SMIM11B-203ENST00000622934 NCOA2Q15596 1464 aa12.27□□□□□ -0.44
SMIM11B-203ENST00000622934 ZNF644Q9H582 1327 aaPredicted RBP12.27□□□□□ -0.45
SMIM11B-203ENST00000622934 NKTRP30414 1462 aaKnown RBP12.27□□□□□ -0.45
SMIM11B-203ENST00000622934 ABCC3O15438 1527 aa12.27□□□□□ -0.45
SMIM11B-203ENST00000622934 PRDM15P57071 1507 aaPredicted RBP12.27□□□□□ -0.45
SMIM11B-203ENST00000622934 TIAM1Q13009 1591 aa12.26□□□□□ -0.45
SMIM11B-203ENST00000622934 CCDC141Q6ZP82 1450 aa12.26□□□□□ -0.45
SMIM11B-203ENST00000622934 VSIG10Q8N0Z9 540 aa12.25□□□□□ -0.45
SMIM11B-203ENST00000622934 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.25□□□□□ -0.45
SMIM11B-203ENST00000622934 NUTM2BA6NNL0 878 aaPredicted RBP12.24□□□□□ -0.45
SMIM11B-203ENST00000622934 NUTM2EB1AL46 878 aaPredicted RBP12.24□□□□□ -0.45
SMIM11B-203ENST00000622934 RGL2O15211 777 aa12.24□□□□□ -0.45
SMIM11B-203ENST00000622934 SHPRHQ149N8 1683 aa12.24□□□□□ -0.45
SMIM11B-203ENST00000622934 MTUS2Q5JR59 1369 aa12.24□□□□□ -0.45
SMIM11B-203ENST00000622934 RSPH4AQ5TD94 716 aa12.24□□□□□ -0.45
SMIM11B-203ENST00000622934 NUTM2DQ5VT03 806 aaPredicted RBP12.24□□□□□ -0.45
SMIM11B-203ENST00000622934 NUTM2AQ8IVF1 878 aaPredicted RBP12.24□□□□□ -0.45
SMIM11B-203ENST00000622934 RBM33Q96EV2 1170 aaKnown RBP12.24□□□□□ -0.45
SMIM11B-203ENST00000622934 RGS12O14924 1447 aa12.22□□□□□ -0.45
SMIM11B-203ENST00000622934 ATAD2Q6PL18 1390 aa12.22□□□□□ -0.45
SMIM11B-203ENST00000622934 TMEM2Q9UHN6 1383 aa12.22□□□□□ -0.45
SMIM11B-203ENST00000622934 AFF2P51816 1311 aa12.22□□□□□ -0.45
SMIM11B-203ENST00000622934 CFAP65Q6ZU64 1925 aaKnown RBP12.22□□□□□ -0.45
SMIM11B-203ENST00000622934 RBM6P78332 1123 aaKnown RBP12.21□□□□□ -0.45
SMIM11B-203ENST00000622934 NWD1Q149M9 1564 aa12.21□□□□□ -0.46
SMIM11B-203ENST00000622934 AHDC1Q5TGY3 1603 aaPredicted RBP12.2□□□□□ -0.46
SMIM11B-203ENST00000622934 SLC26A8Q96RN1 970 aa12.2□□□□□ -0.46
SMIM11B-203ENST00000622934 CAMSAP2Q08AD1 1489 aa12.2□□□□□ -0.46
SMIM11B-203ENST00000622934 TSPY4P0CV99 314 aa12.19□□□□□ -0.46
SMIM11B-203ENST00000622934 TSPY10P0CW01 314 aa12.19□□□□□ -0.46
SMIM11B-203ENST00000622934 KDM5AP29375 1690 aaKnown RBP12.19□□□□□ -0.46
SMIM11B-203ENST00000622934 SETBP1Q9Y6X0 1596 aa12.18□□□□□ -0.46
SMIM11B-203ENST00000622934 QTRT2Q9H974 415 aaKnown RBP12.18□□□□□ -0.46
SMIM11B-203ENST00000622934 BCANQ96GW7 911 aa12.17□□□□□ -0.46
SMIM11B-203ENST00000622934 NGLY1Q96IV0 654 aa12.17□□□□□ -0.46
SMIM11B-203ENST00000622934 ZBTB47Q9UFB7 747 aaPredicted RBP12.17□□□□□ -0.46
SMIM11B-203ENST00000622934 EIF2AK4Q9P2K8 1649 aaKnown RBP12.17□□□□□ -0.46
SMIM11B-203ENST00000622934 CEP152O94986 1710 aa12.17□□□□□ -0.46
SMIM11B-203ENST00000622934 EFCAB6Q5THR3 1501 aa12.16□□□□□ -0.46
SMIM11B-203ENST00000622934 TET3O43151 1660 aa12.16□□□□□ -0.46
SMIM11B-203ENST00000622934 PIK3C2BO00750 1634 aa12.16□□□□□ -0.46
SMIM11B-203ENST00000622934 PLEKHG5O94827 1062 aa12.16□□□□□ -0.46
SMIM11B-203ENST00000622934 PAXIP1Q6ZW49 1069 aaPredicted RBP12.16□□□□□ -0.46
SMIM11B-203ENST00000622934 C14orf37Q86TY3 774 aa12.16□□□□□ -0.46
SMIM11B-203ENST00000622934 NCOA3Q9Y6Q9 1424 aa12.16□□□□□ -0.46
SMIM11B-203ENST00000622934 ARHGAP31Q2M1Z3 1444 aa12.15□□□□□ -0.46
SMIM11B-203ENST00000622934 CADPS2Q86UW7 1296 aa12.15□□□□□ -0.46
SMIM11B-203ENST00000622934 EHBP1L1Q8N3D4 1523 aa12.15□□□□□ -0.46
SMIM11B-203ENST00000622934 ARHGEF5Q12774 1597 aa12.13□□□□□ -0.47
SMIM11B-203ENST00000622934 CEP162Q5TB80 1403 aa12.13□□□□□ -0.47
SMIM11B-203ENST00000622934 MROH1Q8NDA8 1641 aa12.13□□□□□ -0.47
SMIM11B-203ENST00000622934 ATF3P18847 181 aa12.13□□□□□ -0.47
SMIM11B-203ENST00000622934 CCDC125Q86Z20 511 aa12.13□□□□□ -0.47
SMIM11B-203ENST00000622934 CFAP44Q96MT7 982 aa12.13□□□□□ -0.47
SMIM11B-203ENST00000622934 C8orf37Q96NL8 207 aa12.13□□□□□ -0.47
SMIM11B-203ENST00000622934 CIZ1Q9ULV3 898 aaPredicted RBP12.13□□□□□ -0.47
SMIM11B-203ENST00000622934 DIP2AQ14689 1571 aa12.13□□□□□ -0.47
SMIM11B-203ENST00000622934 EP400Q96L91 3159 aa12.12□□□□□ -0.47
SMIM11B-203ENST00000622934 KDM2AQ9Y2K7 1162 aa12.11□□□□□ -0.47
SMIM11B-203ENST00000622934 CHD2O14647 1828 aaKnown RBP12.1□□□□□ -0.47
SMIM11B-203ENST00000622934 C19orf44Q9H6X5 657 aa12.1□□□□□ -0.47
SMIM11B-203ENST00000622934 SETD5Q9C0A6 1442 aa12.1□□□□□ -0.47
SMIM11B-203ENST00000622934 MAST1Q9Y2H9 1570 aa12.09□□□□□ -0.47
SMIM11B-203ENST00000622934 IDI1Q13907 227 aa12.08□□□□□ -0.48
SMIM11B-203ENST00000622934 BRINP3Q76B58 766 aa12.08□□□□□ -0.48
SMIM11B-203ENST00000622934 LRRC59Q96AG4 307 aaKnown RBP12.08□□□□□ -0.48
SMIM11B-203ENST00000622934 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.08□□□□□ -0.48
SMIM11B-203ENST00000622934 LRP5O75197 1615 aa12.08□□□□□ -0.48
SMIM11B-203ENST00000622934 SPRYD3Q8NCJ5 442 aa12.07□□□□□ -0.48
SMIM11B-203ENST00000622934 ADGRB3O60242 1522 aa12.06□□□□□ -0.48
SMIM11B-203ENST00000622934 PLEKHG1Q9ULL1 1385 aa12.06□□□□□ -0.48
SMIM11B-203ENST00000622934 PPP1R15AO75807 674 aaPredicted RBP12.06□□□□□ -0.48
SMIM11B-203ENST00000622934 TRPC5Q9UL62 973 aaPredicted RBP12.06□□□□□ -0.48
SMIM11B-203ENST00000622934 DUOX2Q9NRD8 1548 aa12.06□□□□□ -0.48
SMIM11B-203ENST00000622934 KANK1Q14678 1352 aa12.05□□□□□ -0.48
SMIM11B-203ENST00000622934 HDGFP51858 240 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms