RNA–Protein interactions for RNA: ENST00000621323.4

PDE4D-227, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-227ENST00000621323 ARHGAP23Q9P227 1491 aa10.62□□□□□ -0.71
PDE4D-227ENST00000621323 PHLPP1O60346 1717 aa10.62□□□□□ -0.71
PDE4D-227ENST00000621323 RGS12O14924 1447 aa10.62□□□□□ -0.71
PDE4D-227ENST00000621323 C19orf67A6NJJ6 358 aa10.62□□□□□ -0.71
PDE4D-227ENST00000621323 LTKP29376 864 aa10.62□□□□□ -0.71
PDE4D-227ENST00000621323 SPDYE2BA6NHP3 402 aa10.61□□□□□ -0.71
PDE4D-227ENST00000621323 SPDYE6P0CI01 402 aa10.61□□□□□ -0.71
PDE4D-227ENST00000621323 PRKAR2AP13861 404 aaKnown RBP10.61□□□□□ -0.71
PDE4D-227ENST00000621323 SPDYE2Q495Y8 402 aa10.61□□□□□ -0.71
PDE4D-227ENST00000621323 ZNF772Q68DY9 489 aaPredicted RBP10.61□□□□□ -0.71
PDE4D-227ENST00000621323 SLIT1O75093 1534 aa10.61□□□□□ -0.71
PDE4D-227ENST00000621323 ERVK-7P63135 1459 aa10.61□□□□□ -0.71
PDE4D-227ENST00000621323 CCDC18Q5T9S5 1454 aa10.61□□□□□ -0.71
PDE4D-227ENST00000621323 MBD5Q9P267 1494 aa10.61□□□□□ -0.71
PDE4D-227ENST00000621323 EEA1Q15075 1411 aa10.6□□□□□ -0.71
PDE4D-227ENST00000621323 UBR1Q8IWV7 1749 aa10.6□□□□□ -0.71
PDE4D-227ENST00000621323 KIF3BO15066 747 aa10.59□□□□□ -0.71
PDE4D-227ENST00000621323 RXRBP28702 533 aa10.59□□□□□ -0.71
PDE4D-227ENST00000621323 RBM33Q96EV2 1170 aaKnown RBP10.59□□□□□ -0.71
PDE4D-227ENST00000621323 TIAM1Q13009 1591 aa10.59□□□□□ -0.71
PDE4D-227ENST00000621323 SPATA31A6Q5VVP1 1343 aa10.58□□□□□ -0.71
PDE4D-227ENST00000621323 WASHC2CQ9Y4E1 1318 aa10.58□□□□□ -0.71
PDE4D-227ENST00000621323 RTEL1-TNFRSF6BF6WH68 1400 aa10.58□□□□□ -0.72
PDE4D-227ENST00000621323 FGD6Q6ZV73 1430 aa10.58□□□□□ -0.72
PDE4D-227ENST00000621323 SPOCK2Q92563 424 aa10.58□□□□□ -0.72
PDE4D-227ENST00000621323 STAG3Q9UJ98 1225 aa10.58□□□□□ -0.72
PDE4D-227ENST00000621323 ABCC3O15438 1527 aa10.58□□□□□ -0.72
PDE4D-227ENST00000621323 PRDM15P57071 1507 aaPredicted RBP10.58□□□□□ -0.72
PDE4D-227ENST00000621323 CASKIN1Q8WXD9 1431 aa10.58□□□□□ -0.72
PDE4D-227ENST00000621323 ZNF644Q9H582 1327 aaPredicted RBP10.57□□□□□ -0.72
PDE4D-227ENST00000621323 PLEKHG5O94827 1062 aa10.56□□□□□ -0.72
PDE4D-227ENST00000621323 HAP1P54257 671 aaPredicted RBP10.56□□□□□ -0.72
PDE4D-227ENST00000621323 MEX3CQ5U5Q3 659 aaKnown RBP10.56□□□□□ -0.72
PDE4D-227ENST00000621323 CFDP1Q9UEE9 299 aaPredicted RBP10.56□□□□□ -0.72
PDE4D-227ENST00000621323 NWD1Q149M9 1564 aa10.56□□□□□ -0.72
PDE4D-227ENST00000621323 SHPRHQ149N8 1683 aa10.55□□□□□ -0.72
PDE4D-227ENST00000621323 MIER1Q8N108 512 aa10.55□□□□□ -0.72
PDE4D-227ENST00000621323 NKTRP30414 1462 aaKnown RBP10.55□□□□□ -0.72
PDE4D-227ENST00000621323 KCNA6P17658 529 aa10.54□□□□□ -0.72
PDE4D-227ENST00000621323 PLCB2Q00722 1185 aa10.54□□□□□ -0.72
PDE4D-227ENST00000621323 DIP2AQ14689 1571 aa10.54□□□□□ -0.72
PDE4D-227ENST00000621323 TXNDC2Q86VQ3 553 aa10.54□□□□□ -0.72
PDE4D-227ENST00000621323 SLAIN2Q9P270 581 aa10.54□□□□□ -0.72
PDE4D-227ENST00000621323 AHDC1Q5TGY3 1603 aaPredicted RBP10.54□□□□□ -0.72
PDE4D-227ENST00000621323 CAMSAP2Q08AD1 1489 aa10.54□□□□□ -0.72
PDE4D-227ENST00000621323 AFF2P51816 1311 aa10.53□□□□□ -0.72
PDE4D-227ENST00000621323 ECM2O94769 699 aaPredicted RBP10.52□□□□□ -0.73
PDE4D-227ENST00000621323 PROSER2Q86WR7 435 aaPredicted RBP10.52□□□□□ -0.73
PDE4D-227ENST00000621323 ZRANB1Q9UGI0 708 aa10.52□□□□□ -0.73
PDE4D-227ENST00000621323 TET3O43151 1660 aa10.52□□□□□ -0.73
PDE4D-227ENST00000621323 MSH6P52701 1360 aa10.52□□□□□ -0.73
PDE4D-227ENST00000621323 CCNB3Q8WWL7 1395 aa10.52□□□□□ -0.73
PDE4D-227ENST00000621323 MROH1Q8NDA8 1641 aa10.51□□□□□ -0.73
PDE4D-227ENST00000621323 POTEIP0CG38 1075 aa10.51□□□□□ -0.73
PDE4D-227ENST00000621323 TMEM2Q9UHN6 1383 aa10.51□□□□□ -0.73
PDE4D-227ENST00000621323 KDM5AP29375 1690 aaKnown RBP10.5□□□□□ -0.73
PDE4D-227ENST00000621323 FYCO1Q9BQS8 1478 aa10.5□□□□□ -0.73
PDE4D-227ENST00000621323 SSUH2Q9Y2M2 353 aa10.5□□□□□ -0.73
PDE4D-227ENST00000621323 CCDC141Q6ZP82 1450 aa10.49□□□□□ -0.73
PDE4D-227ENST00000621323 MAST1Q9Y2H9 1570 aa10.49□□□□□ -0.73
PDE4D-227ENST00000621323 ATAD2Q6PL18 1390 aa10.49□□□□□ -0.73
PDE4D-227ENST00000621323 NUTM2BA6NNL0 878 aaPredicted RBP10.48□□□□□ -0.73
PDE4D-227ENST00000621323 NUTM2EB1AL46 878 aaPredicted RBP10.48□□□□□ -0.73
PDE4D-227ENST00000621323 NUTM2DQ5VT03 806 aaPredicted RBP10.48□□□□□ -0.73
PDE4D-227ENST00000621323 NUTM2AQ8IVF1 878 aaPredicted RBP10.48□□□□□ -0.73
PDE4D-227ENST00000621323 SLC26A8Q96RN1 970 aa10.48□□□□□ -0.73
PDE4D-227ENST00000621323 RBM6P78332 1123 aaKnown RBP10.47□□□□□ -0.73
PDE4D-227ENST00000621323 PIK3C2BO00750 1634 aa10.47□□□□□ -0.73
PDE4D-227ENST00000621323 LRP5O75197 1615 aa10.47□□□□□ -0.73
PDE4D-227ENST00000621323 UBTFP17480 764 aaKnown RBP10.46□□□□□ -0.73
PDE4D-227ENST00000621323 EID1Q9Y6B2 187 aa10.46□□□□□ -0.73
PDE4D-227ENST00000621323 CEP152O94986 1710 aa10.45□□□□□ -0.74
PDE4D-227ENST00000621323 QTRT2Q9H974 415 aaKnown RBP10.44□□□□□ -0.74
PDE4D-227ENST00000621323 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.44□□□□□ -0.74
PDE4D-227ENST00000621323 CIZ1Q9ULV3 898 aaPredicted RBP10.44□□□□□ -0.74
PDE4D-227ENST00000621323 CLEC11AQ9Y240 323 aa10.44□□□□□ -0.74
PDE4D-227ENST00000621323 EFCAB6Q5THR3 1501 aa10.43□□□□□ -0.74
PDE4D-227ENST00000621323 ZBTB47Q9UFB7 747 aaPredicted RBP10.43□□□□□ -0.74
PDE4D-227ENST00000621323 ARHGAP31Q2M1Z3 1444 aa10.42□□□□□ -0.74
PDE4D-227ENST00000621323 SETD5Q9C0A6 1442 aa10.42□□□□□ -0.74
PDE4D-227ENST00000621323 CFAP65Q6ZU64 1925 aaKnown RBP10.41□□□□□ -0.74
PDE4D-227ENST00000621323 EIF2AK4Q9P2K8 1649 aaKnown RBP10.41□□□□□ -0.74
PDE4D-227ENST00000621323 BRINP3Q76B58 766 aa10.41□□□□□ -0.74
PDE4D-227ENST00000621323 C8orf37Q96NL8 207 aa10.41□□□□□ -0.74
PDE4D-227ENST00000621323 NCOA3Q9Y6Q9 1424 aa10.41□□□□□ -0.74
PDE4D-227ENST00000621323 POTEMA6NI47 508 aa10.4□□□□□ -0.74
PDE4D-227ENST00000621323 MTUS2Q5JR59 1369 aa10.39□□□□□ -0.75
PDE4D-227ENST00000621323 ARHGEF5Q12774 1597 aa10.39□□□□□ -0.75
PDE4D-227ENST00000621323 ASXL1Q8IXJ9 1541 aa10.39□□□□□ -0.75
PDE4D-227ENST00000621323 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.39□□□□□ -0.75
PDE4D-227ENST00000621323 CEP162Q5TB80 1403 aa10.39□□□□□ -0.75
PDE4D-227ENST00000621323 PNPLA6Q8IY17 1366 aa10.39□□□□□ -0.75
PDE4D-227ENST00000621323 CHD2O14647 1828 aaKnown RBP10.38□□□□□ -0.75
PDE4D-227ENST00000621323 NHSL1Q5SYE7 1610 aa10.38□□□□□ -0.75
PDE4D-227ENST00000621323 ADGRB3O60242 1522 aa10.38□□□□□ -0.75
PDE4D-227ENST00000621323 ATRNO75882 1429 aa10.37□□□□□ -0.75
PDE4D-227ENST00000621323 EHBP1L1Q8N3D4 1523 aa10.37□□□□□ -0.75
PDE4D-227ENST00000621323 BCL9LQ86UU0 1499 aa10.36□□□□□ -0.75
PDE4D-227ENST00000621323 ZFYVE9O95405 1425 aa10.36□□□□□ -0.75
PDE4D-227ENST00000621323 IDI1Q13907 227 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms