RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 RPRD2Q5VT52 1461 aaKnown RBP12.79□□□□□ -0.36
CCDC47-207ENST00000612558 BMP2KQ9NSY1 1161 aaPredicted RBP12.79□□□□□ -0.36
CCDC47-207ENST00000612558 IQGAP3Q86VI3 1631 aa12.78□□□□□ -0.36
CCDC47-207ENST00000612558 RAPGEF3O95398 923 aa12.77□□□□□ -0.36
CCDC47-207ENST00000612558 TEX14Q8IWB6 1497 aa12.77□□□□□ -0.37
CCDC47-207ENST00000612558 POTEGQ6S5H5 508 aa12.77□□□□□ -0.37
CCDC47-207ENST00000612558 SGIP1Q9BQI5 828 aa12.77□□□□□ -0.37
CCDC47-207ENST00000612558 HECW2Q9P2P5 1572 aa12.77□□□□□ -0.37
CCDC47-207ENST00000612558 EIF2AK4Q9P2K8 1649 aaKnown RBP12.76□□□□□ -0.37
CCDC47-207ENST00000612558 KIF3BO15066 747 aa12.75□□□□□ -0.37
CCDC47-207ENST00000612558 PCDH10Q9P2E7 1040 aa12.75□□□□□ -0.37
CCDC47-207ENST00000612558 A2MP01023 1474 aa12.75□□□□□ -0.37
CCDC47-207ENST00000612558 TSPOAP1O95153 1857 aa12.75□□□□□ -0.37
CCDC47-207ENST00000612558 RICTORQ6R327 1708 aa12.74□□□□□ -0.37
CCDC47-207ENST00000612558 L3MBTL2Q969R5 705 aa12.74□□□□□ -0.37
CCDC47-207ENST00000612558 DEPDC5O75140 1603 aa12.74□□□□□ -0.37
CCDC47-207ENST00000612558 KANK1Q14678 1352 aa12.74□□□□□ -0.37
CCDC47-207ENST00000612558 PPRC1Q5VV67 1664 aaKnown RBP12.74□□□□□ -0.37
CCDC47-207ENST00000612558 KIF13AQ9H1H9 1805 aa12.74□□□□□ -0.37
CCDC47-207ENST00000612558 SEC24BO95487 1268 aa12.73□□□□□ -0.37
CCDC47-207ENST00000612558 POTEJP0CG39 1038 aa12.73□□□□□ -0.37
CCDC47-207ENST00000612558 VWDEQ8N2E2 1590 aa12.71□□□□□ -0.38
CCDC47-207ENST00000612558 ABCA6Q8N139 1617 aa12.7□□□□□ -0.38
CCDC47-207ENST00000612558 PCDHB13Q9Y5F0 798 aa12.7□□□□□ -0.38
CCDC47-207ENST00000612558 PRDM15P57071 1507 aaPredicted RBP12.7□□□□□ -0.38
CCDC47-207ENST00000612558 FRMPD1Q5SYB0 1578 aa12.69□□□□□ -0.38
CCDC47-207ENST00000612558 ATP10AO60312 1499 aa12.69□□□□□ -0.38
CCDC47-207ENST00000612558 DIEXFQ68CQ4 756 aaKnown RBP12.69□□□□□ -0.38
CCDC47-207ENST00000612558 FAM212AQ96EL1 285 aa12.69□□□□□ -0.38
CCDC47-207ENST00000612558 TRPC6Q9Y210 931 aa12.69□□□□□ -0.38
CCDC47-207ENST00000612558 ZMYM4Q5VZL5 1548 aa12.69□□□□□ -0.38
CCDC47-207ENST00000612558 TTLL13PA6NNM8 815 aa12.69□□□□□ -0.38
CCDC47-207ENST00000612558 BCORL1Q5H9F3 1711 aa12.68□□□□□ -0.38
CCDC47-207ENST00000612558 CCDC144AA2RUR9 1427 aa12.68□□□□□ -0.38
CCDC47-207ENST00000612558 DIP2CQ9Y2E4 1556 aa12.68□□□□□ -0.38
CCDC47-207ENST00000612558 PLA2R1Q13018 1463 aa12.68□□□□□ -0.38
CCDC47-207ENST00000612558 MROH1Q8NDA8 1641 aa12.68□□□□□ -0.38
CCDC47-207ENST00000612558 RNF17Q9BXT8 1623 aaKnown RBP12.68□□□□□ -0.38
CCDC47-207ENST00000612558 IER5LQ5T953 404 aa12.68□□□□□ -0.38
CCDC47-207ENST00000612558 TET3O43151 1660 aa12.68□□□□□ -0.38
CCDC47-207ENST00000612558 YEATS2Q9ULM3 1422 aa12.66□□□□□ -0.38
CCDC47-207ENST00000612558 E9PCH4 1651 aa12.66□□□□□ -0.38
CCDC47-207ENST00000612558 NUBP1P53384 320 aa12.65□□□□□ -0.38
CCDC47-207ENST00000612558 GGT6Q6P531 493 aa12.65□□□□□ -0.38
CCDC47-207ENST00000612558 FAM163AQ96GL9 167 aaPredicted RBP12.65□□□□□ -0.38
CCDC47-207ENST00000612558 LMTK2Q8IWU2 1503 aa12.65□□□□□ -0.38
CCDC47-207ENST00000612558 PTPRTO14522 1441 aa12.65□□□□□ -0.38
CCDC47-207ENST00000612558 NBPF8Q3BBV2 869 aa12.64□□□□□ -0.39
CCDC47-207ENST00000612558 DNAJC5Q9H3Z4 198 aa12.64□□□□□ -0.39
CCDC47-207ENST00000612558 TRIM35Q9UPQ4 493 aa12.63□□□□□ -0.39
CCDC47-207ENST00000612558 POTEFA5A3E0 1075 aa12.62□□□□□ -0.39
CCDC47-207ENST00000612558 FKBP8Q14318 412 aa12.62□□□□□ -0.39
CCDC47-207ENST00000612558 WASHC2CQ9Y4E1 1318 aa12.62□□□□□ -0.39
CCDC47-207ENST00000612558 COL17A1Q9UMD9 1497 aaPredicted RBP12.62□□□□□ -0.39
CCDC47-207ENST00000612558 TRPM2O94759 1503 aa12.62□□□□□ -0.39
CCDC47-207ENST00000612558 DCAF11Q8TEB1 546 aa12.61□□□□□ -0.39
CCDC47-207ENST00000612558 UHRF1BP1Q6BDS2 1440 aa12.61□□□□□ -0.39
CCDC47-207ENST00000612558 EFCAB6Q5THR3 1501 aa12.61□□□□□ -0.39
CCDC47-207ENST00000612558 SPHKAPQ2M3C7 1700 aa12.61□□□□□ -0.39
CCDC47-207ENST00000612558 REREQ9P2R6 1566 aa12.6□□□□□ -0.39
CCDC47-207ENST00000612558 CEP152O94986 1710 aa12.6□□□□□ -0.39
CCDC47-207ENST00000612558 ABCC3O15438 1527 aa12.59□□□□□ -0.39
CCDC47-207ENST00000612558 EIF4G2P78344 907 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCDC47-207ENST00000612558 RGL3Q3MIN7 710 aa12.59□□□□□ -0.39
CCDC47-207ENST00000612558 AGLP35573 1532 aa12.58□□□□□ -0.4
CCDC47-207ENST00000612558 COLQQ9Y215 455 aaPredicted RBP12.58□□□□□ -0.4
CCDC47-207ENST00000612558 KDM2AQ9Y2K7 1162 aa12.58□□□□□ -0.4
CCDC47-207ENST00000612558 ZNF326Q5BKZ1 582 aaKnown RBP12.57□□□□□ -0.4
CCDC47-207ENST00000612558 FBXO3Q9UK99 471 aa12.57□□□□□ -0.4
CCDC47-207ENST00000612558 NPATQ14207 1427 aa12.57□□□□□ -0.4
CCDC47-207ENST00000612558 SPATA31E1Q6ZUB1 1445 aa12.57□□□□□ -0.4
CCDC47-207ENST00000612558 HSPA5P11021 654 aaKnown RBP12.56□□□□□ -0.4
CCDC47-207ENST00000612558 IFNL1Q8IU54 200 aa12.56□□□□□ -0.4
CCDC47-207ENST00000612558 STAC3Q96MF2 364 aa12.56□□□□□ -0.4
CCDC47-207ENST00000612558 TMEM106CQ9BVX2 250 aa12.56□□□□□ -0.4
CCDC47-207ENST00000612558 HIRIP3Q9BW71 556 aaPredicted RBP12.56□□□□□ -0.4
CCDC47-207ENST00000612558 ZC3H13Q5T200 1668 aaKnown RBP12.56□□□□□ -0.4
CCDC47-207ENST00000612558 CLTCL1P53675 1640 aa12.56□□□□□ -0.4
CCDC47-207ENST00000612558 ARHGAP31Q2M1Z3 1444 aa12.55□□□□□ -0.4
CCDC47-207ENST00000612558 ARHGEF40Q8TER5 1519 aa12.55□□□□□ -0.4
CCDC47-207ENST00000612558 CAMSAP1Q5T5Y3 1602 aa12.54□□□□□ -0.4
CCDC47-207ENST00000612558 NEURL4Q96JN8 1562 aa12.54□□□□□ -0.4
CCDC47-207ENST00000612558 RALGAPBQ86X10 1494 aa12.54□□□□□ -0.4
CCDC47-207ENST00000612558 DCAF8Q5TAQ9 597 aa12.54□□□□□ -0.4
CCDC47-207ENST00000612558 PRAG1Q86YV5 1406 aa12.54□□□□□ -0.4
CCDC47-207ENST00000612558 CNTLNQ9NXG0 1405 aa12.54□□□□□ -0.4
CCDC47-207ENST00000612558 CFAP65Q6ZU64 1925 aaKnown RBP12.54□□□□□ -0.4
CCDC47-207ENST00000612558 PLCG2P16885 1265 aa12.52□□□□□ -0.4
CCDC47-207ENST00000612558 NOS1P29475 1434 aa12.52□□□□□ -0.41
CCDC47-207ENST00000612558 KIF1BO60333 1816 aa12.51□□□□□ -0.41
CCDC47-207ENST00000612558 CARD11Q9BXL7 1154 aa12.51□□□□□ -0.41
CCDC47-207ENST00000612558 UGGT1Q9NYU2 1555 aa12.5□□□□□ -0.41
CCDC47-207ENST00000612558 DDX10Q13206 875 aaKnown RBP12.49□□□□□ -0.41
CCDC47-207ENST00000612558 ROCK2O75116 1388 aaKnown RBP12.49□□□□□ -0.41
CCDC47-207ENST00000612558 USP47Q96K76 1375 aa12.48□□□□□ -0.41
CCDC47-207ENST00000612558 LCE2DQ5TA82 110 aaPredicted RBP12.48□□□□□ -0.41
CCDC47-207ENST00000612558 SIGLEC1Q9BZZ2 1709 aa12.48□□□□□ -0.41
CCDC47-207ENST00000612558 TRPM1Q7Z4N2 1603 aa12.48□□□□□ -0.41
CCDC47-207ENST00000612558 SLC52A1Q9NWF4 448 aa12.47□□□□□ -0.41
CCDC47-207ENST00000612558 GPRASP1Q5JY77 1395 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms