RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 KDM5BQ9UGL1 1544 aa14.67□□□□□ -0.06
TOP3A-217ENST00000584582 ELL2O00472 640 aaPredicted RBP14.67□□□□□ -0.06
TOP3A-217ENST00000584582 PER1O15534 1290 aaPredicted RBP14.66□□□□□ -0.06
TOP3A-217ENST00000584582 BCAR3O75815 825 aa14.66□□□□□ -0.06
TOP3A-217ENST00000584582 FTSJ3Q8IY81 847 aaKnown RBP14.66□□□□□ -0.06
TOP3A-217ENST00000584582 TCERG1O14776 1098 aaKnown RBP14.66□□□□□ -0.06
TOP3A-217ENST00000584582 ADGRL2O95490 1459 aa14.65□□□□□ -0.06
TOP3A-217ENST00000584582 ABCA8O94911 1581 aa14.65□□□□□ -0.06
TOP3A-217ENST00000584582 CD109Q6YHK3 1445 aa14.65□□□□□ -0.06
TOP3A-217ENST00000584582 MSH5O43196 834 aa14.65□□□□□ -0.06
TOP3A-217ENST00000584582 ARXQ96QS3 562 aa14.65□□□□□ -0.06
TOP3A-217ENST00000584582 RALGAPBQ86X10 1494 aa14.65□□□□□ -0.06
TOP3A-217ENST00000584582 FBLN1P23142 703 aa14.64□□□□□ -0.07
TOP3A-217ENST00000584582 IDI1Q13907 227 aa14.64□□□□□ -0.07
TOP3A-217ENST00000584582 PRAM1Q96QH2 718 aa14.63□□□□□ -0.07
TOP3A-217ENST00000584582 ASXL2Q76L83 1435 aa14.63□□□□□ -0.07
TOP3A-217ENST00000584582 A2MP01023 1474 aa14.63□□□□□ -0.07
TOP3A-217ENST00000584582 PANK1Q8TE04 598 aa14.63□□□□□ -0.07
TOP3A-217ENST00000584582 CFAP65Q6ZU64 1925 aaKnown RBP14.62□□□□□ -0.07
TOP3A-217ENST00000584582 SMG6Q86US8 1419 aaKnown RBP14.62□□□□□ -0.07
TOP3A-217ENST00000584582 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.62□□□□□ -0.07
TOP3A-217ENST00000584582 EVC2Q86UK5 1308 aa14.61□□□□□ -0.07
TOP3A-217ENST00000584582 PDE4AP27815 886 aa14.61□□□□□ -0.07
TOP3A-217ENST00000584582 PAK3O75914 559 aaPredicted RBP14.6□□□□□ -0.07
TOP3A-217ENST00000584582 HDGFL2Q7Z4V5 671 aaPredicted RBP14.6□□□□□ -0.07
TOP3A-217ENST00000584582 TCP11L2Q8N4U5 519 aa14.6□□□□□ -0.07
TOP3A-217ENST00000584582 CGNL1Q0VF96 1302 aa14.6□□□□□ -0.07
TOP3A-217ENST00000584582 ABCC2Q92887 1545 aa14.6□□□□□ -0.07
TOP3A-217ENST00000584582 ARHGEF12Q9NZN5 1544 aa14.6□□□□□ -0.07
TOP3A-217ENST00000584582 SAMD9LQ8IVG5 1584 aa14.6□□□□□ -0.07
TOP3A-217ENST00000584582 TTC37Q6PGP7 1564 aa14.59□□□□□ -0.07
TOP3A-217ENST00000584582 NOS1P29475 1434 aa14.59□□□□□ -0.07
TOP3A-217ENST00000584582 HMOX1P09601 288 aa14.59□□□□□ -0.07
TOP3A-217ENST00000584582 AMER1Q5JTC6 1135 aaPredicted RBP14.59□□□□□ -0.07
TOP3A-217ENST00000584582 WAPLQ7Z5K2 1190 aa14.59□□□□□ -0.07
TOP3A-217ENST00000584582 LMOD2Q6P5Q4 547 aa14.58□□□□□ -0.08
TOP3A-217ENST00000584582 CARD14Q9BXL6 1004 aa14.58□□□□□ -0.08
TOP3A-217ENST00000584582 SHANK2Q9UPX8 1470 aa14.58□□□□□ -0.08
TOP3A-217ENST00000584582 SPRYD3Q8NCJ5 442 aa14.57□□□□□ -0.08
TOP3A-217ENST00000584582 PLA2R1Q13018 1463 aa14.57□□□□□ -0.08
TOP3A-217ENST00000584582 TSR2Q969E8 191 aaKnown RBP14.57□□□□□ -0.08
TOP3A-217ENST00000584582 TERF2IPQ9NYB0 399 aa14.57□□□□□ -0.08
TOP3A-217ENST00000584582 TXNDC2Q86VQ3 553 aa14.56□□□□□ -0.08
TOP3A-217ENST00000584582 CABP1Q9NZU7 370 aa14.56□□□□□ -0.08
TOP3A-217ENST00000584582 SMC4Q9NTJ3 1288 aa14.56□□□□□ -0.08
TOP3A-217ENST00000584582 CHD1O14646 1710 aa14.55□□□□□ -0.08
TOP3A-217ENST00000584582 CDC42BPAQ5VT25 1732 aa14.55□□□□□ -0.08
TOP3A-217ENST00000584582 ITPRIPQ8IWB1 547 aa14.55□□□□□ -0.08
TOP3A-217ENST00000584582 WDR7Q9Y4E6 1490 aa14.55□□□□□ -0.08
TOP3A-217ENST00000584582 DUOX2Q9NRD8 1548 aa14.54□□□□□ -0.08
TOP3A-217ENST00000584582 E9PSI1 815 aa14.54□□□□□ -0.08
TOP3A-217ENST00000584582 SPINK5Q9NQ38 1064 aaPredicted RBP14.54□□□□□ -0.08
TOP3A-217ENST00000584582 UHRF1BP1Q6BDS2 1440 aa14.54□□□□□ -0.08
TOP3A-217ENST00000584582 APBB1O00213 710 aa14.54□□□□□ -0.08
TOP3A-217ENST00000584582 NSD3Q9BZ95 1437 aa14.53□□□□□ -0.08
TOP3A-217ENST00000584582 IPO9Q96P70 1041 aaKnown RBP14.53□□□□□ -0.08
TOP3A-217ENST00000584582 PARD3Q8TEW0 1356 aa14.52□□□□□ -0.08
TOP3A-217ENST00000584582 DMRT2Q9Y5R5 561 aa14.51□□□□□ -0.09
TOP3A-217ENST00000584582 BCORL1Q5H9F3 1711 aa14.51□□□□□ -0.09
TOP3A-217ENST00000584582 STAC3Q96MF2 364 aa14.51□□□□□ -0.09
TOP3A-217ENST00000584582 UPF2Q9HAU5 1272 aaKnown RBP14.51□□□□□ -0.09
TOP3A-217ENST00000584582 UGGT1Q9NYU2 1555 aa14.51□□□□□ -0.09
TOP3A-217ENST00000584582 RIPK4P57078 832 aa14.51□□□□□ -0.09
TOP3A-217ENST00000584582 RUNDC1Q96C34 613 aa14.51□□□□□ -0.09
TOP3A-217ENST00000584582 CDK19Q9BWU1 502 aa14.51□□□□□ -0.09
TOP3A-217ENST00000584582 FANCIQ9NVI1 1328 aa14.5□□□□□ -0.09
TOP3A-217ENST00000584582 DUSP27Q5VZP5 1158 aa14.5□□□□□ -0.09
TOP3A-217ENST00000584582 LTV1Q96GA3 475 aaPredicted RBP14.5□□□□□ -0.09
TOP3A-217ENST00000584582 SLC26A8Q96RN1 970 aa14.5□□□□□ -0.09
TOP3A-217ENST00000584582 NUTM2GQ5VZR2 741 aa14.5□□□□□ -0.09
TOP3A-217ENST00000584582 SCAF11Q99590 1463 aaKnown RBP14.5□□□□□ -0.09
TOP3A-217ENST00000584582 CEBPAP49715 358 aaPredicted RBP14.49□□□□□ -0.09
TOP3A-217ENST00000584582 THUMPD2Q9BTF0 503 aaKnown RBP14.49□□□□□ -0.09
TOP3A-217ENST00000584582 PLEKHH1Q9ULM0 1364 aa14.49□□□□□ -0.09
TOP3A-217ENST00000584582 ADGBQ8N7X0 1667 aa14.49□□□□□ -0.09
TOP3A-217ENST00000584582 WWC1Q8IX03 1113 aa14.48□□□□□ -0.09
TOP3A-217ENST00000584582 MYH16Q9H6N6 1097 aa14.48□□□□□ -0.09
TOP3A-217ENST00000584582 SLFN5Q08AF3 891 aa14.48□□□□□ -0.09
TOP3A-217ENST00000584582 C14orf93Q9H972 538 aaKnown RBP14.48□□□□□ -0.09
TOP3A-217ENST00000584582 DIAPH1O60610 1272 aaKnown RBP14.47□□□□□ -0.09
TOP3A-217ENST00000584582 SLKQ9H2G2 1235 aaPredicted RBP14.47□□□□□ -0.09
TOP3A-217ENST00000584582 RBM33Q96EV2 1170 aaKnown RBP14.47□□□□□ -0.09
TOP3A-217ENST00000584582 DEKP35659 375 aaKnown RBP14.46□□□□□ -0.09
TOP3A-217ENST00000584582 TNNQ9UQP3 1299 aa14.46□□□□□ -0.09
TOP3A-217ENST00000584582 RRS1Q15050 365 aaKnown RBP14.46□□□□□ -0.09
TOP3A-217ENST00000584582 KDM5CP41229 1560 aa14.46□□□□□ -0.1
TOP3A-217ENST00000584582 NCKAP5LQ9HCH0 1330 aa14.46□□□□□ -0.1
TOP3A-217ENST00000584582 EXOSC9Q06265 439 aaKnown RBP14.45□□□□□ -0.1
TOP3A-217ENST00000584582 PMFBP1Q8TBY8 1022 aa14.45□□□□□ -0.1
TOP3A-217ENST00000584582 CENPQQ7L2Z9 268 aaPredicted RBP14.44□□□□□ -0.1
TOP3A-217ENST00000584582 SLC52A1Q9NWF4 448 aa14.44□□□□□ -0.1
TOP3A-217ENST00000584582 HSP90AA1P07900 732 aaKnown RBP14.44□□□□□ -0.1
TOP3A-217ENST00000584582 RTN4Q9NQC3 1192 aaKnown RBP14.44□□□□□ -0.1
TOP3A-217ENST00000584582 COL17A1Q9UMD9 1497 aaPredicted RBP14.44□□□□□ -0.1
TOP3A-217ENST00000584582 PRKAR2BP31323 418 aa14.44□□□□□ -0.1
TOP3A-217ENST00000584582 NGDNQ8NEJ9 315 aaKnown RBP14.44□□□□□ -0.1
TOP3A-217ENST00000584582 LRPPRCP42704 1394 aaKnown RBP14.43□□□□□ -0.1
TOP3A-217ENST00000584582 ARHGEF5Q12774 1597 aa14.42□□□□□ -0.1
TOP3A-217ENST00000584582 MAGI2Q86UL8 1455 aa14.42□□□□□ -0.1
TOP3A-217ENST00000584582 ZRANB1Q9UGI0 708 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms