RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 CCDC61Q9Y6R9 512 aa11.79□□□□□ -0.52
COPS3-215ENST00000578317 GCC2Q8IWJ2 1684 aa11.79□□□□□ -0.52
COPS3-215ENST00000578317 DIP2CQ9Y2E4 1556 aa11.79□□□□□ -0.52
COPS3-215ENST00000578317 NUP155O75694 1391 aa11.79□□□□□ -0.52
COPS3-215ENST00000578317 AGLP35573 1532 aa11.78□□□□□ -0.52
COPS3-215ENST00000578317 ABCA6Q8N139 1617 aa11.78□□□□□ -0.52
COPS3-215ENST00000578317 CLSPNQ9HAW4 1339 aa11.77□□□□□ -0.53
COPS3-215ENST00000578317 DHX57Q6P158 1386 aaKnown RBP11.76□□□□□ -0.53
COPS3-215ENST00000578317 SIGLEC1Q9BZZ2 1709 aa11.76□□□□□ -0.53
COPS3-215ENST00000578317 GGT6Q6P531 493 aa11.75□□□□□ -0.53
COPS3-215ENST00000578317 KANK1Q14678 1352 aa11.75□□□□□ -0.53
COPS3-215ENST00000578317 EIF2AK4Q9P2K8 1649 aaKnown RBP11.75□□□□□ -0.53
COPS3-215ENST00000578317 RIOK3O14730 519 aaKnown RBP11.75□□□□□ -0.53
COPS3-215ENST00000578317 TPRNQ4KMQ1 711 aa11.75□□□□□ -0.53
COPS3-215ENST00000578317 KDM5DQ9BY66 1539 aa11.74□□□□□ -0.53
COPS3-215ENST00000578317 CCER1Q8TC90 406 aaPredicted RBP11.74□□□□□ -0.53
COPS3-215ENST00000578317 PZPP20742 1482 aa11.73□□□□□ -0.53
COPS3-215ENST00000578317 WASHC2CQ9Y4E1 1318 aa11.73□□□□□ -0.53
COPS3-215ENST00000578317 BCORL1Q5H9F3 1711 aa11.72□□□□□ -0.53
COPS3-215ENST00000578317 UNC13BO14795 1591 aa11.71□□□□□ -0.53
COPS3-215ENST00000578317 VWDEQ8N2E2 1590 aa11.71□□□□□ -0.53
COPS3-215ENST00000578317 ARID4BQ4LE39 1312 aaPredicted RBP11.71□□□□□ -0.53
COPS3-215ENST00000578317 DEPDC5O75140 1603 aa11.7□□□□□ -0.54
COPS3-215ENST00000578317 PRDM15P57071 1507 aaPredicted RBP11.7□□□□□ -0.54
COPS3-215ENST00000578317 LMTK2Q8IWU2 1503 aa11.7□□□□□ -0.54
COPS3-215ENST00000578317 CD44P16070 742 aaKnown RBP11.7□□□□□ -0.54
COPS3-215ENST00000578317 RNF17Q9BXT8 1623 aaKnown RBP11.7□□□□□ -0.54
COPS3-215ENST00000578317 FAM135AQ9P2D6 1515 aa11.69□□□□□ -0.54
COPS3-215ENST00000578317 MROH1Q8NDA8 1641 aa11.68□□□□□ -0.54
COPS3-215ENST00000578317 ANKRD30BQ9BXX2 1392 aa11.68□□□□□ -0.54
COPS3-215ENST00000578317 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
COPS3-215ENST00000578317 ARHGAP31Q2M1Z3 1444 aa11.67□□□□□ -0.54
COPS3-215ENST00000578317 C19orf67A6NJJ6 358 aa11.67□□□□□ -0.54
COPS3-215ENST00000578317 MLECQ14165 292 aa11.67□□□□□ -0.54
COPS3-215ENST00000578317 IQGAP3Q86VI3 1631 aa11.67□□□□□ -0.54
COPS3-215ENST00000578317 VGFO15240 615 aaPredicted RBP11.66□□□□□ -0.54
COPS3-215ENST00000578317 ESF1Q9H501 851 aaKnown RBP11.66□□□□□ -0.54
COPS3-215ENST00000578317 ZRANB1Q9UGI0 708 aa11.66□□□□□ -0.54
COPS3-215ENST00000578317 RPRD2Q5VT52 1461 aaKnown RBP11.65□□□□□ -0.54
COPS3-215ENST00000578317 ABCC3O15438 1527 aa11.65□□□□□ -0.54
COPS3-215ENST00000578317 CNTLNQ9NXG0 1405 aa11.65□□□□□ -0.55
COPS3-215ENST00000578317 NBR1Q14596 966 aa11.64□□□□□ -0.55
COPS3-215ENST00000578317 NKX1-1Q15270 411 aaPredicted RBP11.64□□□□□ -0.55
COPS3-215ENST00000578317 KIF12Q96FN5 646 aa11.64□□□□□ -0.55
COPS3-215ENST00000578317 TIMELESSQ9UNS1 1208 aa11.64□□□□□ -0.55
COPS3-215ENST00000578317 PTPRTO14522 1441 aa11.64□□□□□ -0.55
COPS3-215ENST00000578317 SGIP1Q9BQI5 828 aa11.64□□□□□ -0.55
COPS3-215ENST00000578317 PCDHB8Q9UN66 801 aa11.64□□□□□ -0.55
COPS3-215ENST00000578317 PCDHB13Q9Y5F0 798 aa11.64□□□□□ -0.55
COPS3-215ENST00000578317 ZMYM3Q14202 1370 aa11.63□□□□□ -0.55
COPS3-215ENST00000578317 NPATQ14207 1427 aa11.63□□□□□ -0.55
COPS3-215ENST00000578317 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.63□□□□□ -0.55
COPS3-215ENST00000578317 STK25O00506 426 aa11.63□□□□□ -0.55
COPS3-215ENST00000578317 ZFP91Q96JP5 570 aaPredicted RBP11.63□□□□□ -0.55
COPS3-215ENST00000578317 PLA2R1Q13018 1463 aa11.62□□□□□ -0.55
COPS3-215ENST00000578317 MAP3K13O43283 966 aa11.62□□□□□ -0.55
COPS3-215ENST00000578317 ZEB1P37275 1124 aaPredicted RBP11.62□□□□□ -0.55
COPS3-215ENST00000578317 PHF12Q96QT6 1004 aa11.62□□□□□ -0.55
COPS3-215ENST00000578317 ADAMTSL3P82987 1691 aa11.62□□□□□ -0.55
COPS3-215ENST00000578317 KDM4FA0A1W2PPD8 638 aa11.61□□□□□ -0.55
COPS3-215ENST00000578317 SIN3AQ96ST3 1273 aa11.61□□□□□ -0.55
COPS3-215ENST00000578317 GTPBP6O43824 516 aaPredicted RBP11.6□□□□□ -0.55
COPS3-215ENST00000578317 NOS1P29475 1434 aa11.6□□□□□ -0.55
COPS3-215ENST00000578317 EFCAB6Q5THR3 1501 aa11.6□□□□□ -0.55
COPS3-215ENST00000578317 ZNF467Q7Z7K2 595 aaPredicted RBP11.6□□□□□ -0.55
COPS3-215ENST00000578317 SLC52A1Q9NWF4 448 aa11.6□□□□□ -0.55
COPS3-215ENST00000578317 TET3O43151 1660 aa11.6□□□□□ -0.55
COPS3-215ENST00000578317 MADDQ8WXG6 1647 aa11.6□□□□□ -0.55
COPS3-215ENST00000578317 IFNL1Q8IU54 200 aa11.6□□□□□ -0.55
COPS3-215ENST00000578317 ZNF579Q8NAF0 562 aaKnown RBP11.59□□□□□ -0.55
COPS3-215ENST00000578317 ZC3H13Q5T200 1668 aaKnown RBP11.59□□□□□ -0.55
COPS3-215ENST00000578317 FBXO31Q5XUX0 539 aaPredicted RBP11.58□□□□□ -0.56
COPS3-215ENST00000578317 NEUROD1Q13562 356 aa11.57□□□□□ -0.56
COPS3-215ENST00000578317 CCDC144AA2RUR9 1427 aa11.57□□□□□ -0.56
COPS3-215ENST00000578317 BCL11BQ9C0K0 894 aaPredicted RBP11.57□□□□□ -0.56
COPS3-215ENST00000578317 FER1L4A9Z1Z3 1794 aa11.57□□□□□ -0.56
COPS3-215ENST00000578317 EVX2Q03828 476 aa11.56□□□□□ -0.56
COPS3-215ENST00000578317 RIMS1Q86UR5 1692 aaKnown RBP11.55□□□□□ -0.56
COPS3-215ENST00000578317 IDI1Q13907 227 aa11.55□□□□□ -0.56
COPS3-215ENST00000578317 STAC3Q96MF2 364 aa11.55□□□□□ -0.56
COPS3-215ENST00000578317 TRPM2O94759 1503 aa11.55□□□□□ -0.56
COPS3-215ENST00000578317 E9PCH4 1651 aa11.54□□□□□ -0.56
COPS3-215ENST00000578317 ERVK-7P63135 1459 aa11.54□□□□□ -0.56
COPS3-215ENST00000578317 RYDENQ9NUL5 291 aaKnown RBP11.54□□□□□ -0.56
COPS3-215ENST00000578317 CAMSAP1Q5T5Y3 1602 aa11.54□□□□□ -0.56
COPS3-215ENST00000578317 CEBPAP49715 358 aaPredicted RBP11.53□□□□□ -0.56
COPS3-215ENST00000578317 PDAP1Q13442 181 aaKnown RBP11.53□□□□□ -0.56
COPS3-215ENST00000578317 STK24Q9Y6E0 443 aa11.53□□□□□ -0.56
COPS3-215ENST00000578317 CLTCQ00610 1675 aaKnown RBP11.53□□□□□ -0.56
COPS3-215ENST00000578317 PTPRMP28827 1452 aa11.52□□□□□ -0.56
COPS3-215ENST00000578317 SPATA31D1Q6ZQQ2 1576 aa11.52□□□□□ -0.56
COPS3-215ENST00000578317 PPP1R15AO75807 674 aaPredicted RBP11.52□□□□□ -0.57
COPS3-215ENST00000578317 L3MBTL2Q969R5 705 aa11.52□□□□□ -0.57
COPS3-215ENST00000578317 CEP152O94986 1710 aa11.52□□□□□ -0.57
COPS3-215ENST00000578317 TNRQ92752 1358 aa11.52□□□□□ -0.57
COPS3-215ENST00000578317 MROH2AA6NES4 1674 aa11.51□□□□□ -0.57
COPS3-215ENST00000578317 SPATA31E1Q6ZUB1 1445 aa11.51□□□□□ -0.57
COPS3-215ENST00000578317 TONSLQ96HA7 1378 aa11.51□□□□□ -0.57
COPS3-215ENST00000578317 C3P01024 1663 aa11.5□□□□□ -0.57
COPS3-215ENST00000578317 NEURL4Q96JN8 1562 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms