RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 KANK1Q14678 1352 aa17.62■□□□□ 0.41
NDEL1-204ENST00000578172 CENPJQ9HC77 1338 aaPredicted RBP17.62■□□□□ 0.41
NDEL1-204ENST00000578172 DDRGK1Q96HY6 314 aa17.61■□□□□ 0.41
NDEL1-204ENST00000578172 PARD3Q8TEW0 1356 aa17.61■□□□□ 0.41
NDEL1-204ENST00000578172 MTHFSP49914 203 aa17.6■□□□□ 0.41
NDEL1-204ENST00000578172 GGNBP2Q9H3C7 697 aa17.6■□□□□ 0.41
NDEL1-204ENST00000578172 LRPPRCP42704 1394 aaKnown RBP17.6■□□□□ 0.41
NDEL1-204ENST00000578172 FBLN1P23142 703 aa17.6■□□□□ 0.41
NDEL1-204ENST00000578172 WASHC2CQ9Y4E1 1318 aa17.6■□□□□ 0.41
NDEL1-204ENST00000578172 A2MP01023 1474 aa17.6■□□□□ 0.41
NDEL1-204ENST00000578172 AMER1Q5JTC6 1135 aaPredicted RBP17.6■□□□□ 0.41
NDEL1-204ENST00000578172 TSR2Q969E8 191 aaKnown RBP17.59■□□□□ 0.41
NDEL1-204ENST00000578172 POGKQ9P215 609 aa17.59■□□□□ 0.41
NDEL1-204ENST00000578172 NUTM2FA1L443 756 aa17.59■□□□□ 0.41
NDEL1-204ENST00000578172 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.59■□□□□ 0.418e-14■■■■□ 19.6
NDEL1-204ENST00000578172 MINK1Q8N4C8 1332 aaPredicted RBP17.59■□□□□ 0.41
NDEL1-204ENST00000578172 TRAPPC8Q9Y2L5 1435 aa17.59■□□□□ 0.41
NDEL1-204ENST00000578172 RNF123Q5XPI4 1314 aa17.59■□□□□ 0.41
NDEL1-204ENST00000578172 CENPQQ7L2Z9 268 aaPredicted RBP17.58■□□□□ 0.41
NDEL1-204ENST00000578172 KDM5CP41229 1560 aa17.58■□□□□ 0.41
NDEL1-204ENST00000578172 GZF1Q9H116 711 aaPredicted RBP17.58■□□□□ 0.4
NDEL1-204ENST00000578172 TCP11L2Q8N4U5 519 aa17.58■□□□□ 0.4
NDEL1-204ENST00000578172 FAM161AQ3B820 660 aa17.57■□□□□ 0.4
NDEL1-204ENST00000578172 BRPF3Q9ULD4 1205 aa17.57■□□□□ 0.4
NDEL1-204ENST00000578172 CFAP53Q96M91 514 aa17.57■□□□□ 0.4
NDEL1-204ENST00000578172 RAPGEF3O95398 923 aa17.56■□□□□ 0.4
NDEL1-204ENST00000578172 IGHDP01880 384 aa17.56■□□□□ 0.4
NDEL1-204ENST00000578172 NFKBIBQ15653 356 aa17.56■□□□□ 0.4
NDEL1-204ENST00000578172 CARD14Q9BXL6 1004 aa17.56■□□□□ 0.4
NDEL1-204ENST00000578172 FRAT2O75474 233 aaPredicted RBP17.56■□□□□ 0.4
NDEL1-204ENST00000578172 SLFN5Q08AF3 891 aa17.55■□□□□ 0.4
NDEL1-204ENST00000578172 ITSN2Q9NZM3 1697 aa17.55■□□□□ 0.4
NDEL1-204ENST00000578172 UPF2Q9HAU5 1272 aaKnown RBP17.54■□□□□ 0.4
NDEL1-204ENST00000578172 MBD5Q9P267 1494 aa17.54■□□□□ 0.4
NDEL1-204ENST00000578172 ITPRIPQ8IWB1 547 aa17.54■□□□□ 0.4
NDEL1-204ENST00000578172 ADGRL2O95490 1459 aa17.54■□□□□ 0.4
NDEL1-204ENST00000578172 UHRF1BP1Q6BDS2 1440 aa17.53■□□□□ 0.4
NDEL1-204ENST00000578172 MFAP1P55081 439 aaKnown RBP17.53■□□□□ 0.4
NDEL1-204ENST00000578172 SMC4Q9NTJ3 1288 aa17.53■□□□□ 0.4
NDEL1-204ENST00000578172 PLA2R1Q13018 1463 aa17.52■□□□□ 0.4
NDEL1-204ENST00000578172 ABCC10Q5T3U5 1492 aa17.52■□□□□ 0.4
NDEL1-204ENST00000578172 E9PSI1 815 aa17.52■□□□□ 0.4
NDEL1-204ENST00000578172 APBB1O00213 710 aa17.52■□□□□ 0.4
NDEL1-204ENST00000578172 MS4A1P11836 297 aa17.52■□□□□ 0.4
NDEL1-204ENST00000578172 MAPK8IP3Q9UPT6 1336 aa17.52■□□□□ 0.39
NDEL1-204ENST00000578172 FOXD4L1Q9NU39 408 aa17.52■□□□□ 0.39
NDEL1-204ENST00000578172 CFAP65Q6ZU64 1925 aaKnown RBP17.51■□□□□ 0.39
NDEL1-204ENST00000578172 NUP160Q12769 1436 aa17.51■□□□□ 0.39
NDEL1-204ENST00000578172 WWC1Q8IX03 1113 aa17.5■□□□□ 0.39
NDEL1-204ENST00000578172 SEC24BO95487 1268 aa17.49■□□□□ 0.39
NDEL1-204ENST00000578172 EIF3AQ14152 1382 aaKnown RBP17.49■□□□□ 0.39
NDEL1-204ENST00000578172 MAGI2Q86UL8 1455 aa17.47■□□□□ 0.39
NDEL1-204ENST00000578172 HSP90AA1P07900 732 aaKnown RBP17.47■□□□□ 0.39
NDEL1-204ENST00000578172 HMOX1P09601 288 aa17.47■□□□□ 0.39
NDEL1-204ENST00000578172 ERCC6L2Q5T890 1561 aa17.46■□□□□ 0.39
NDEL1-204ENST00000578172 CDC42BPAQ5VT25 1732 aa17.45■□□□□ 0.38
NDEL1-204ENST00000578172 RLBP1P12271 317 aa17.45■□□□□ 0.38
NDEL1-204ENST00000578172 COL17A1Q9UMD9 1497 aaPredicted RBP17.45■□□□□ 0.38
NDEL1-204ENST00000578172 THUMPD2Q9BTF0 503 aaKnown RBP17.44■□□□□ 0.38
NDEL1-204ENST00000578172 SAMD9LQ8IVG5 1584 aa17.44■□□□□ 0.38
NDEL1-204ENST00000578172 NSD3Q9BZ95 1437 aa17.44■□□□□ 0.38
NDEL1-204ENST00000578172 EXOSC9Q06265 439 aaKnown RBP17.43■□□□□ 0.38
NDEL1-204ENST00000578172 GSE1Q14687 1217 aa17.43■□□□□ 0.38
NDEL1-204ENST00000578172 TPRNQ4KMQ1 711 aa17.43■□□□□ 0.38
NDEL1-204ENST00000578172 C1orf115Q9H7X2 142 aa17.43■□□□□ 0.38
NDEL1-204ENST00000578172 ADGBQ8N7X0 1667 aa17.43■□□□□ 0.38
NDEL1-204ENST00000578172 RUNDC1Q96C34 613 aa17.42■□□□□ 0.38
NDEL1-204ENST00000578172 PDZRN3Q9UPQ7 1066 aa17.42■□□□□ 0.38
NDEL1-204ENST00000578172 C8orf34Q49A92 452 aa17.42■□□□□ 0.38
NDEL1-204ENST00000578172 BECN1Q14457 450 aa17.41■□□□□ 0.38
NDEL1-204ENST00000578172 ARHGEF12Q9NZN5 1544 aa17.41■□□□□ 0.38
NDEL1-204ENST00000578172 PCDHB15Q9Y5E8 787 aa17.4■□□□□ 0.38
NDEL1-204ENST00000578172 CGNL1Q0VF96 1302 aa17.4■□□□□ 0.38
NDEL1-204ENST00000578172 UGGT1Q9NYU2 1555 aa17.4■□□□□ 0.38
NDEL1-204ENST00000578172 TTC37Q6PGP7 1564 aa17.39■□□□□ 0.37
NDEL1-204ENST00000578172 LNPKQ9C0E8 428 aa17.39■□□□□ 0.37
NDEL1-204ENST00000578172 RIPK4P57078 832 aa17.39■□□□□ 0.37
NDEL1-204ENST00000578172 NOS1P29475 1434 aa17.39■□□□□ 0.37
NDEL1-204ENST00000578172 ABCA8O94911 1581 aa17.38■□□□□ 0.37
NDEL1-204ENST00000578172 CYB5RLQ6IPT4 315 aa17.38■□□□□ 0.37
NDEL1-204ENST00000578172 SHANK2Q9UPX8 1470 aa17.38■□□□□ 0.37
NDEL1-204ENST00000578172 KDM5DQ9BY66 1539 aa17.38■□□□□ 0.37
NDEL1-204ENST00000578172 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.37■□□□□ 0.37
NDEL1-204ENST00000578172 RARSP54136 660 aaKnown RBP17.37■□□□□ 0.37
NDEL1-204ENST00000578172 PRAM1Q96QH2 718 aa17.37■□□□□ 0.37
NDEL1-204ENST00000578172 MYH16Q9H6N6 1097 aa17.36■□□□□ 0.37
NDEL1-204ENST00000578172 ZBTB7CA1YPR0 619 aa17.36■□□□□ 0.37
NDEL1-204ENST00000578172 RWDD1Q9H446 243 aaPredicted RBP17.36■□□□□ 0.37
NDEL1-204ENST00000578172 SCAF11Q99590 1463 aaKnown RBP17.35■□□□□ 0.37
NDEL1-204ENST00000578172 FBXO31Q5XUX0 539 aaPredicted RBP17.35■□□□□ 0.37
NDEL1-204ENST00000578172 PLCH2O75038 1416 aa17.35■□□□□ 0.37
NDEL1-204ENST00000578172 ZKSCAN2Q63HK3 967 aa17.34■□□□□ 0.37
NDEL1-204ENST00000578172 EVC2Q86UK5 1308 aa17.34■□□□□ 0.37
NDEL1-204ENST00000578172 DZIP1LQ8IYY4 767 aaKnown RBP17.34■□□□□ 0.37
NDEL1-204ENST00000578172 ESF1Q9H501 851 aaKnown RBP17.34■□□□□ 0.37
NDEL1-204ENST00000578172 WAPLQ7Z5K2 1190 aa17.33■□□□□ 0.36
NDEL1-204ENST00000578172 KDM2BQ8NHM5 1336 aa17.33■□□□□ 0.36
NDEL1-204ENST00000578172 CABP1Q9NZU7 370 aa17.33■□□□□ 0.36
NDEL1-204ENST00000578172 GPRASP1Q5JY77 1395 aa17.32■□□□□ 0.36
NDEL1-204ENST00000578172 PMFBP1Q8TBY8 1022 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms