RNA–Protein interactions for RNA: ENST00000578010.1

PPP4R1-207, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-207ENST00000578010 TET3O43151 1660 aa9.87□□□□□ -0.83
PPP4R1-207ENST00000578010 CHGAP10645 457 aaKnown RBP9.86□□□□□ -0.83
PPP4R1-207ENST00000578010 RAB3GAP2Q9H2M9 1393 aa9.86□□□□□ -0.83
PPP4R1-207ENST00000578010 IQGAP3Q86VI3 1631 aa9.85□□□□□ -0.83
PPP4R1-207ENST00000578010 ERVK-7P63135 1459 aa9.85□□□□□ -0.83
PPP4R1-207ENST00000578010 SPATA31D1Q6ZQQ2 1576 aa9.85□□□□□ -0.83
PPP4R1-207ENST00000578010 VWDEQ8N2E2 1590 aa9.85□□□□□ -0.83
PPP4R1-207ENST00000578010 A2ML1A8K2U0 1454 aa9.85□□□□□ -0.83
PPP4R1-207ENST00000578010 POLR1AO95602 1720 aaPredicted RBP9.85□□□□□ -0.83
PPP4R1-207ENST00000578010 STRCQ7RTU9 1775 aa9.84□□□□□ -0.83
PPP4R1-207ENST00000578010 LMTK2Q8IWU2 1503 aa9.84□□□□□ -0.83
PPP4R1-207ENST00000578010 IDI1Q13907 227 aa9.84□□□□□ -0.83
PPP4R1-207ENST00000578010 THEMISQ8N1K5 641 aaPredicted RBP9.83□□□□□ -0.84
PPP4R1-207ENST00000578010 NLRP1Q9C000 1473 aa9.83□□□□□ -0.84
PPP4R1-207ENST00000578010 UGGT1Q9NYU2 1555 aa9.83□□□□□ -0.84
PPP4R1-207ENST00000578010 E9PCH4 1651 aa9.83□□□□□ -0.84
PPP4R1-207ENST00000578010 SLC52A1Q9NWF4 448 aa9.82□□□□□ -0.84
PPP4R1-207ENST00000578010 UBR1Q8IWV7 1749 aa9.82□□□□□ -0.84
PPP4R1-207ENST00000578010 PIK3C2BO00750 1634 aa9.82□□□□□ -0.84
PPP4R1-207ENST00000578010 ARHGAP31Q2M1Z3 1444 aa9.82□□□□□ -0.84
PPP4R1-207ENST00000578010 POTEHQ6S545 545 aa9.81□□□□□ -0.84
PPP4R1-207ENST00000578010 PROM2Q8N271 834 aa9.81□□□□□ -0.84
PPP4R1-207ENST00000578010 SYNMO15061 1565 aa9.8□□□□□ -0.84
PPP4R1-207ENST00000578010 SPHKAPQ2M3C7 1700 aa9.8□□□□□ -0.84
PPP4R1-207ENST00000578010 PLA2R1Q13018 1463 aa9.79□□□□□ -0.84
PPP4R1-207ENST00000578010 RPRD2Q5VT52 1461 aaKnown RBP9.79□□□□□ -0.84
PPP4R1-207ENST00000578010 ZNF326Q5BKZ1 582 aaKnown RBP9.79□□□□□ -0.84
PPP4R1-207ENST00000578010 BCANQ96GW7 911 aa9.79□□□□□ -0.84
PPP4R1-207ENST00000578010 MYO5BQ9ULV0 1848 aa9.79□□□□□ -0.84
PPP4R1-207ENST00000578010 FXR2P51116 673 aaKnown RBP eCLIP9.78□□□□□ -0.84
PPP4R1-207ENST00000578010 HDGFP51858 240 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-207ENST00000578010 TXNDC2Q86VQ3 553 aa9.78□□□□□ -0.84
PPP4R1-207ENST00000578010 ANKLE2Q86XL3 938 aa9.78□□□□□ -0.84
PPP4R1-207ENST00000578010 NCKAP5LQ9HCH0 1330 aa9.78□□□□□ -0.84
PPP4R1-207ENST00000578010 ADGRB3O60242 1522 aa9.77□□□□□ -0.84
PPP4R1-207ENST00000578010 RGL3Q3MIN7 710 aa9.77□□□□□ -0.85
PPP4R1-207ENST00000578010 EID1Q9Y6B2 187 aa9.77□□□□□ -0.85
PPP4R1-207ENST00000578010 NUTM2DQ5VT03 806 aaPredicted RBP9.76□□□□□ -0.85
PPP4R1-207ENST00000578010 CLEC11AQ9Y240 323 aa9.76□□□□□ -0.85
PPP4R1-207ENST00000578010 KDM5AP29375 1690 aaKnown RBP9.76□□□□□ -0.85
PPP4R1-207ENST00000578010 IQGAP1P46940 1657 aa9.76□□□□□ -0.85
PPP4R1-207ENST00000578010 NOS1P29475 1434 aa9.75□□□□□ -0.85
PPP4R1-207ENST00000578010 PPP1R15AO75807 674 aaPredicted RBP9.75□□□□□ -0.85
PPP4R1-207ENST00000578010 NEUROD1Q13562 356 aa9.75□□□□□ -0.85
PPP4R1-207ENST00000578010 NEURL4Q96JN8 1562 aa9.75□□□□□ -0.85
PPP4R1-207ENST00000578010 PTPRTO14522 1441 aa9.74□□□□□ -0.85
PPP4R1-207ENST00000578010 KIF1BO60333 1816 aa9.74□□□□□ -0.85
PPP4R1-207ENST00000578010 PIP4P2Q8N4L2 257 aa9.73□□□□□ -0.85
PPP4R1-207ENST00000578010 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.73□□□□□ -0.85
PPP4R1-207ENST00000578010 SCAF11Q99590 1463 aaKnown RBP9.72□□□□□ -0.85
PPP4R1-207ENST00000578010 TMEM131LA2VDJ0 1609 aa9.72□□□□□ -0.85
PPP4R1-207ENST00000578010 LTKP29376 864 aa9.72□□□□□ -0.85
PPP4R1-207ENST00000578010 SIN3AQ96ST3 1273 aa9.72□□□□□ -0.85
PPP4R1-207ENST00000578010 NPHP4O75161 1426 aaPredicted RBP9.72□□□□□ -0.85
PPP4R1-207ENST00000578010 SLIT1O75093 1534 aa9.72□□□□□ -0.85
PPP4R1-207ENST00000578010 TRPM2O94759 1503 aa9.72□□□□□ -0.85
PPP4R1-207ENST00000578010 CLTCL1P53675 1640 aa9.71□□□□□ -0.85
PPP4R1-207ENST00000578010 FKBP8Q14318 412 aa9.71□□□□□ -0.86
PPP4R1-207ENST00000578010 CCER1Q8TC90 406 aaPredicted RBP9.71□□□□□ -0.86
PPP4R1-207ENST00000578010 KDM2AQ9Y2K7 1162 aa9.71□□□□□ -0.86
PPP4R1-207ENST00000578010 PRR29P0C7W0 189 aa9.7□□□□□ -0.86
PPP4R1-207ENST00000578010 TMEM2Q9UHN6 1383 aa9.7□□□□□ -0.86
PPP4R1-207ENST00000578010 ARHGAP23Q9P227 1491 aa9.7□□□□□ -0.86
PPP4R1-207ENST00000578010 CCDC144AA2RUR9 1427 aa9.69□□□□□ -0.86
PPP4R1-207ENST00000578010 VGFO15240 615 aaPredicted RBP9.69□□□□□ -0.86
PPP4R1-207ENST00000578010 SLC26A8Q96RN1 970 aa9.69□□□□□ -0.86
PPP4R1-207ENST00000578010 ANKRD30BQ9BXX2 1392 aa9.69□□□□□ -0.86
PPP4R1-207ENST00000578010 MED14O60244 1454 aa9.68□□□□□ -0.86
PPP4R1-207ENST00000578010 RPGRIP1LQ68CZ1 1315 aa9.68□□□□□ -0.86
PPP4R1-207ENST00000578010 ZNF335Q9H4Z2 1342 aaPredicted RBP9.68□□□□□ -0.86
PPP4R1-207ENST00000578010 RIMS2Q9UQ26 1411 aa9.67□□□□□ -0.86
PPP4R1-207ENST00000578010 DCAF11Q8TEB1 546 aa9.67□□□□□ -0.86
PPP4R1-207ENST00000578010 DHX57Q6P158 1386 aaKnown RBP9.66□□□□□ -0.86
PPP4R1-207ENST00000578010 CERKQ8TCT0 537 aa9.66□□□□□ -0.86
PPP4R1-207ENST00000578010 LTBP4Q8N2S1 1624 aa9.66□□□□□ -0.86
PPP4R1-207ENST00000578010 CPS1P31327 1500 aa9.64□□□□□ -0.87
PPP4R1-207ENST00000578010 STRCP1A6NGW2 1772 aa9.64□□□□□ -0.87
PPP4R1-207ENST00000578010 ZFYVE9O95405 1425 aa9.64□□□□□ -0.87
PPP4R1-207ENST00000578010 L3MBTL2Q969R5 705 aa9.63□□□□□ -0.87
PPP4R1-207ENST00000578010 TBX22Q9Y458 520 aa9.63□□□□□ -0.87
PPP4R1-207ENST00000578010 PPLO60437 1756 aa9.63□□□□□ -0.87
PPP4R1-207ENST00000578010 NEXMIFQ5QGS0 1516 aa9.62□□□□□ -0.87
PPP4R1-207ENST00000578010 ADGRF5Q8IZF2 1346 aa9.62□□□□□ -0.87
PPP4R1-207ENST00000578010 PRKAR2AP13861 404 aaKnown RBP9.62□□□□□ -0.87
PPP4R1-207ENST00000578010 DIP2AQ14689 1571 aa9.62□□□□□ -0.87
PPP4R1-207ENST00000578010 PLEKHG1Q9ULL1 1385 aa9.62□□□□□ -0.87
PPP4R1-207ENST00000578010 STAC3Q96MF2 364 aa9.61□□□□□ -0.87
PPP4R1-207ENST00000578010 IQSEC2Q5JU85 1478 aa9.6□□□□□ -0.87
PPP4R1-207ENST00000578010 IFT172Q9UG01 1749 aa9.6□□□□□ -0.87
PPP4R1-207ENST00000578010 KCNA6P17658 529 aa9.6□□□□□ -0.87
PPP4R1-207ENST00000578010 CFAP70Q5T0N1 1121 aa9.6□□□□□ -0.87
PPP4R1-207ENST00000578010 ILDR1Q86SU0 546 aaPredicted RBP9.6□□□□□ -0.87
PPP4R1-207ENST00000578010 FBXO41Q8TF61 875 aa9.6□□□□□ -0.87
PPP4R1-207ENST00000578010 STK26Q9P289 416 aa9.6□□□□□ -0.87
PPP4R1-207ENST00000578010 CHD2O14647 1828 aaKnown RBP9.59□□□□□ -0.87
PPP4R1-207ENST00000578010 TMEM132EQ6IEE7 984 aa9.59□□□□□ -0.87
PPP4R1-207ENST00000578010 PROSER2Q86WR7 435 aaPredicted RBP9.59□□□□□ -0.87
PPP4R1-207ENST00000578010 RBM33Q96EV2 1170 aaKnown RBP9.59□□□□□ -0.87
PPP4R1-207ENST00000578010 AMOTL2Q9Y2J4 779 aa9.59□□□□□ -0.87
PPP4R1-207ENST00000578010 NRXN3Q9Y4C0 1643 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms