RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 DUOX2Q9NRD8 1548 aa10.23□□□□□ -0.77
SMG6-204ENST00000570606 PTPN23Q9H3S7 1636 aa10.22□□□□□ -0.77
SMG6-204ENST00000570606 ERVK-7P63135 1459 aa10.22□□□□□ -0.77
SMG6-204ENST00000570606 KANK4Q5T7N3 995 aaPredicted RBP10.21□□□□□ -0.77
SMG6-204ENST00000570606 NPHP4O75161 1426 aaPredicted RBP10.21□□□□□ -0.78
SMG6-204ENST00000570606 SHANK2Q9UPX8 1470 aa10.21□□□□□ -0.78
SMG6-204ENST00000570606 PRDM15P57071 1507 aaPredicted RBP10.21□□□□□ -0.78
SMG6-204ENST00000570606 VWDEQ8N2E2 1590 aa10.21□□□□□ -0.78
SMG6-204ENST00000570606 ANKLE2Q86XL3 938 aa10.2□□□□□ -0.78
SMG6-204ENST00000570606 UBR1Q8IWV7 1749 aa10.2□□□□□ -0.78
SMG6-204ENST00000570606 REM2Q8IYK8 340 aaPredicted RBP10.2□□□□□ -0.78
SMG6-204ENST00000570606 THEMISQ8N1K5 641 aaPredicted RBP10.2□□□□□ -0.78
SMG6-204ENST00000570606 KIF15Q9NS87 1388 aa10.2□□□□□ -0.78
SMG6-204ENST00000570606 SYNMO15061 1565 aa10.19□□□□□ -0.78
SMG6-204ENST00000570606 ILDR2Q71H61 639 aa10.19□□□□□ -0.78
SMG6-204ENST00000570606 CIZ1Q9ULV3 898 aaPredicted RBP10.19□□□□□ -0.78
SMG6-204ENST00000570606 MED14O60244 1454 aa10.18□□□□□ -0.78
SMG6-204ENST00000570606 ERBINQ96RT1 1412 aa10.18□□□□□ -0.78
SMG6-204ENST00000570606 PIP4K2BP78356 416 aa10.17□□□□□ -0.78
SMG6-204ENST00000570606 CLEC11AQ9Y240 323 aa10.17□□□□□ -0.78
SMG6-204ENST00000570606 DAPK1P53355 1430 aa10.16□□□□□ -0.78
SMG6-204ENST00000570606 STRCP1A6NGW2 1772 aa10.16□□□□□ -0.78
SMG6-204ENST00000570606 SOCS7O14512 581 aa10.16□□□□□ -0.78
SMG6-204ENST00000570606 NUBP1P53384 320 aa10.16□□□□□ -0.78
SMG6-204ENST00000570606 CREBZFQ9NS37 354 aa10.16□□□□□ -0.78
SMG6-204ENST00000570606 ABCC5O15440 1437 aa10.16□□□□□ -0.78
SMG6-204ENST00000570606 FGD6Q6ZV73 1430 aa10.16□□□□□ -0.78
SMG6-204ENST00000570606 TOM1O60784 492 aa10.15□□□□□ -0.78
SMG6-204ENST00000570606 BBXQ8WY36 941 aaPredicted RBP10.15□□□□□ -0.78
SMG6-204ENST00000570606 SCAF11Q99590 1463 aaKnown RBP10.15□□□□□ -0.78
SMG6-204ENST00000570606 PIK3C2BO00750 1634 aa10.15□□□□□ -0.79
SMG6-204ENST00000570606 KANK1Q14678 1352 aa10.14□□□□□ -0.79
SMG6-204ENST00000570606 MED1Q15648 1581 aaPredicted RBP10.14□□□□□ -0.79
SMG6-204ENST00000570606 PRR29P0C7W0 189 aa10.14□□□□□ -0.79
SMG6-204ENST00000570606 MNX1P50219 401 aaPredicted RBP10.14□□□□□ -0.79
SMG6-204ENST00000570606 ARHGAP31Q2M1Z3 1444 aa10.14□□□□□ -0.79
SMG6-204ENST00000570606 RRP7BPQ9NSQ0 103 aa10.13□□□□□ -0.79
SMG6-204ENST00000570606 SLIT1O75093 1534 aa10.12□□□□□ -0.79
SMG6-204ENST00000570606 HSPA1LP34931 641 aa10.12□□□□□ -0.79
SMG6-204ENST00000570606 HAP1P54257 671 aaPredicted RBP10.12□□□□□ -0.79
SMG6-204ENST00000570606 ANKRD30AQ9BXX3 1397 aa10.12□□□□□ -0.79
SMG6-204ENST00000570606 LRRC7Q96NW7 1537 aa10.12□□□□□ -0.79
SMG6-204ENST00000570606 ALKQ9UM73 1620 aa10.11□□□□□ -0.79
SMG6-204ENST00000570606 ARHGAP23Q9P227 1491 aa10.11□□□□□ -0.79
SMG6-204ENST00000570606 GSE1Q14687 1217 aa10.11□□□□□ -0.79
SMG6-204ENST00000570606 KDM5AP29375 1690 aaKnown RBP10.11□□□□□ -0.79
SMG6-204ENST00000570606 EFCAB6Q5THR3 1501 aa10.11□□□□□ -0.79
SMG6-204ENST00000570606 LMTK2Q8IWU2 1503 aa10.11□□□□□ -0.79
SMG6-204ENST00000570606 CHIC2Q9UKJ5 165 aa10.1□□□□□ -0.79
SMG6-204ENST00000570606 XIRP1Q702N8 1843 aaKnown RBP10.1□□□□□ -0.79
SMG6-204ENST00000570606 ADGRB3O60242 1522 aa10.09□□□□□ -0.79
SMG6-204ENST00000570606 PITPNM1O00562 1244 aa10.09□□□□□ -0.79
SMG6-204ENST00000570606 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.09□□□□□ -0.79
SMG6-204ENST00000570606 EID1Q9Y6B2 187 aa10.09□□□□□ -0.79
SMG6-204ENST00000570606 TXNDC2Q86VQ3 553 aa10.08□□□□□ -0.8
SMG6-204ENST00000570606 RNF25Q96BH1 459 aaPredicted RBP10.08□□□□□ -0.8
SMG6-204ENST00000570606 ADGRL2O95490 1459 aa10.08□□□□□ -0.8
SMG6-204ENST00000570606 TMEM2Q9UHN6 1383 aa10.07□□□□□ -0.8
SMG6-204ENST00000570606 LTKP29376 864 aa10.07□□□□□ -0.8
SMG6-204ENST00000570606 MYO5BQ9ULV0 1848 aa10.07□□□□□ -0.8
SMG6-204ENST00000570606 TET3O43151 1660 aa10.06□□□□□ -0.8
SMG6-204ENST00000570606 GCC2Q8IWJ2 1684 aa10.06□□□□□ -0.8
SMG6-204ENST00000570606 FAM50AQ14320 339 aaKnown RBP10.06□□□□□ -0.8
SMG6-204ENST00000570606 CHGAP10645 457 aaKnown RBP10.04□□□□□ -0.8
SMG6-204ENST00000570606 NOS1P29475 1434 aa10.04□□□□□ -0.8
SMG6-204ENST00000570606 ANKRD50Q9ULJ7 1429 aa10.04□□□□□ -0.8
SMG6-204ENST00000570606 UNC13BO14795 1591 aa10.04□□□□□ -0.8
SMG6-204ENST00000570606 RPRD2Q5VT52 1461 aaKnown RBP10.04□□□□□ -0.8
SMG6-204ENST00000570606 NWD1Q149M9 1564 aa10.03□□□□□ -0.8
SMG6-204ENST00000570606 DCAF8Q5TAQ9 597 aa10.03□□□□□ -0.8
SMG6-204ENST00000570606 PAXIP1Q6ZW49 1069 aaPredicted RBP10.03□□□□□ -0.8
SMG6-204ENST00000570606 IDI1Q13907 227 aa10.02□□□□□ -0.81
SMG6-204ENST00000570606 FAM212AQ96EL1 285 aa10.02□□□□□ -0.81
SMG6-204ENST00000570606 NKTRP30414 1462 aaKnown RBP10.02□□□□□ -0.81
SMG6-204ENST00000570606 TMEM94Q12767 1356 aa10.01□□□□□ -0.81
SMG6-204ENST00000570606 RASEFQ8IZ41 740 aa10.01□□□□□ -0.81
SMG6-204ENST00000570606 HS6ST3Q8IZP7 471 aa10.01□□□□□ -0.81
SMG6-204ENST00000570606 VSIG10Q8N0Z9 540 aa10.01□□□□□ -0.81
SMG6-204ENST00000570606 BCANQ96GW7 911 aa10.01□□□□□ -0.81
SMG6-204ENST00000570606 ROBO1Q9Y6N7 1651 aa10.01□□□□□ -0.81
SMG6-204ENST00000570606 E9PCH4 1651 aa10□□□□□ -0.81
SMG6-204ENST00000570606 PPP1R15AO75807 674 aaPredicted RBP10□□□□□ -0.81
SMG6-204ENST00000570606 CFAP44Q96MT7 982 aa10□□□□□ -0.81
SMG6-204ENST00000570606 SLC26A8Q96RN1 970 aa10□□□□□ -0.81
SMG6-204ENST00000570606 SLC52A1Q9NWF4 448 aa10□□□□□ -0.81
SMG6-204ENST00000570606 TMEM131LA2VDJ0 1609 aa10□□□□□ -0.81
SMG6-204ENST00000570606 IQGAP3Q86VI3 1631 aa10□□□□□ -0.81
SMG6-204ENST00000570606 CHD2O14647 1828 aaKnown RBP9.99□□□□□ -0.81
SMG6-204ENST00000570606 KCNA6P17658 529 aa9.99□□□□□ -0.81
SMG6-204ENST00000570606 ZFYVE9O95405 1425 aa9.99□□□□□ -0.81
SMG6-204ENST00000570606 RIMS2Q9UQ26 1411 aa9.99□□□□□ -0.81
SMG6-204ENST00000570606 PROSER2Q86WR7 435 aaPredicted RBP9.98□□□□□ -0.81
SMG6-204ENST00000570606 MSH6P52701 1360 aa9.98□□□□□ -0.81
SMG6-204ENST00000570606 PLEKHG1Q9ULL1 1385 aa9.98□□□□□ -0.81
SMG6-204ENST00000570606 FAM135BQ49AJ0 1406 aa9.98□□□□□ -0.81
SMG6-204ENST00000570606 PHLPP1O60346 1717 aa9.97□□□□□ -0.81
SMG6-204ENST00000570606 RIOK3O14730 519 aaKnown RBP9.97□□□□□ -0.81
SMG6-204ENST00000570606 CHRM1P11229 460 aaPredicted RBP9.97□□□□□ -0.81
SMG6-204ENST00000570606 SPRYD3Q8NCJ5 442 aa9.97□□□□□ -0.81
SMG6-204ENST00000570606 DIP2AQ14689 1571 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms