RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 PLEKHD1A6NEE1 506 aa8.61□□□□□ -1.03
CNOT1-216ENST00000569240 TUBB4BP68371 445 aa8.6□□□□□ -1.03
CNOT1-216ENST00000569240 IRX3P78415 501 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-216ENST00000569240 GIMAP7Q8NHV1 300 aa8.6□□□□□ -1.03
CNOT1-216ENST00000569240 CC2D1BQ5T0F9 858 aaKnown RBP8.6□□□□□ -1.03
CNOT1-216ENST00000569240 POTEB2H3BUK9 544 aa8.6□□□□□ -1.03
CNOT1-216ENST00000569240 FRAT2O75474 233 aaPredicted RBP8.6□□□□□ -1.03
CNOT1-216ENST00000569240 CAVIN2O95810 425 aa8.6□□□□□ -1.03
CNOT1-216ENST00000569240 CRBNQ96SW2 442 aa8.59□□□□□ -1.03
CNOT1-216ENST00000569240 FEZ1Q99689 392 aa8.59□□□□□ -1.03
CNOT1-216ENST00000569240 PLEKHH2Q8IVE3 1493 aa8.59□□□□□ -1.03
CNOT1-216ENST00000569240 SMC4Q9NTJ3 1288 aa8.59□□□□□ -1.03
CNOT1-216ENST00000569240 PIP4K2AP48426 406 aaPredicted RBP8.59□□□□□ -1.03
CNOT1-216ENST00000569240 UVSSAQ2YD98 709 aa8.59□□□□□ -1.03
CNOT1-216ENST00000569240 LRRFIP1Q32MZ4 808 aaKnown RBP8.59□□□□□ -1.03
CNOT1-216ENST00000569240 STAG3Q9UJ98 1225 aa8.59□□□□□ -1.03
CNOT1-216ENST00000569240 CLGNO14967 610 aa8.59□□□□□ -1.04
CNOT1-216ENST00000569240 NEFHP12036 1026 aa8.59□□□□□ -1.04
CNOT1-216ENST00000569240 FILIP1Q7Z7B0 1213 aa8.59□□□□□ -1.04
CNOT1-216ENST00000569240 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.59□□□□□ -1.04
CNOT1-216ENST00000569240 NEXNQ0ZGT2 675 aa8.58□□□□□ -1.04
CNOT1-216ENST00000569240 SF3A1Q15459 793 aaKnown RBP8.58□□□□□ -1.04
CNOT1-216ENST00000569240 IQCEQ6IPM2 695 aa8.58□□□□□ -1.04
CNOT1-216ENST00000569240 IVLP07476 585 aa8.58□□□□□ -1.04
CNOT1-216ENST00000569240 RSPH4AQ5TD94 716 aa8.58□□□□□ -1.04
CNOT1-216ENST00000569240 CCDC18Q5T9S5 1454 aa8.58□□□□□ -1.04
CNOT1-216ENST00000569240 TTLL5Q6EMB2 1281 aa8.58□□□□□ -1.04
CNOT1-216ENST00000569240 CLUAP1Q96AJ1 413 aa8.58□□□□□ -1.04
CNOT1-216ENST00000569240 TPD52L1Q16890 204 aaPredicted RBP8.58□□□□□ -1.04
CNOT1-216ENST00000569240 MICALCLQ6ZW33 695 aa8.58□□□□□ -1.04
CNOT1-216ENST00000569240 CDC45O75419 566 aa8.58□□□□□ -1.04
CNOT1-216ENST00000569240 CPLX2Q6PUV4 134 aaKnown RBP8.58□□□□□ -1.04
CNOT1-216ENST00000569240 CCDC73Q6ZRK6 1079 aa8.58□□□□□ -1.04
CNOT1-216ENST00000569240 API5Q9BZZ5 524 aaKnown RBP8.58□□□□□ -1.04
CNOT1-216ENST00000569240 CCDC144AA2RUR9 1427 aa8.57□□□□□ -1.04
CNOT1-216ENST00000569240 CCDC7Q96M83 1385 aa8.57□□□□□ -1.04
CNOT1-216ENST00000569240 WWC1Q8IX03 1113 aa8.57□□□□□ -1.04
CNOT1-216ENST00000569240 KANK1Q14678 1352 aa8.57□□□□□ -1.04
CNOT1-216ENST00000569240 ZKSCAN1P17029 563 aaPredicted RBP8.57□□□□□ -1.04
CNOT1-216ENST00000569240 MPHOSPH9Q99550 1183 aa8.57□□□□□ -1.04
CNOT1-216ENST00000569240 NACADO15069 1562 aa8.57□□□□□ -1.04
CNOT1-216ENST00000569240 CCDC192P0DO97 292 aa8.57□□□□□ -1.04
CNOT1-216ENST00000569240 CHGAP10645 457 aaKnown RBP8.57□□□□□ -1.04
CNOT1-216ENST00000569240 ZNF592Q92610 1267 aa8.57□□□□□ -1.04
CNOT1-216ENST00000569240 U2SURPO15042 1029 aaKnown RBP8.57□□□□□ -1.04
CNOT1-216ENST00000569240 STK11IPQ8N1F8 1099 aa8.57□□□□□ -1.04
CNOT1-216ENST00000569240 CCDC47Q96A33 483 aaKnown RBP8.57□□□□□ -1.04
CNOT1-216ENST00000569240 PAK3O75914 559 aaPredicted RBP8.56□□□□□ -1.04
CNOT1-216ENST00000569240 RBM25P49756 843 aaKnown RBP8.56□□□□□ -1.04
CNOT1-216ENST00000569240 CEP89Q96ST8 783 aa8.56□□□□□ -1.04
CNOT1-216ENST00000569240 ESF1Q9H501 851 aaKnown RBP8.56□□□□□ -1.04
CNOT1-216ENST00000569240 PLEKHH1Q9ULM0 1364 aa8.56□□□□□ -1.04
CNOT1-216ENST00000569240 BMS1Q14692 1282 aaKnown RBP8.56□□□□□ -1.04
CNOT1-216ENST00000569240 NEUROD2Q15784 382 aa8.56□□□□□ -1.04
CNOT1-216ENST00000569240 BBXQ8WY36 941 aaPredicted RBP8.56□□□□□ -1.04
CNOT1-216ENST00000569240 TMCO3Q6UWJ1 677 aa8.55□□□□□ -1.04
CNOT1-216ENST00000569240 PAXBP1Q9Y5B6 917 aa8.55□□□□□ -1.04
CNOT1-216ENST00000569240 AEBP1Q8IUX7 1158 aa8.55□□□□□ -1.04
CNOT1-216ENST00000569240 TUBBP07437 444 aa8.55□□□□□ -1.04
CNOT1-216ENST00000569240 CCDC94Q9BW85 323 aaPredicted RBP8.55□□□□□ -1.04
CNOT1-216ENST00000569240 H3BQV1 296 aa8.55□□□□□ -1.04
CNOT1-216ENST00000569240 IFFO2Q5TF58 517 aa8.55□□□□□ -1.04
CNOT1-216ENST00000569240 CBFA2T2O43439 604 aa8.55□□□□□ -1.04
CNOT1-216ENST00000569240 GABPB1Q06547 395 aaPredicted RBP8.55□□□□□ -1.04
CNOT1-216ENST00000569240 WDR33Q9C0J8 1336 aaKnown RBP8.54□□□□□ -1.04
CNOT1-216ENST00000569240 V9GYY5 206 aaPredicted RBP8.54□□□□□ -1.04
CNOT1-216ENST00000569240 GOLGA6L10A6NI86 522 aa8.54□□□□□ -1.04
CNOT1-216ENST00000569240 MAP9Q49MG5 647 aa8.54□□□□□ -1.04
CNOT1-216ENST00000569240 JAKMIP3Q5VZ66 844 aa8.54□□□□□ -1.04
CNOT1-216ENST00000569240 CCAR2Q8N163 923 aaKnown RBP8.54□□□□□ -1.04
CNOT1-216ENST00000569240 STK31Q9BXU1 1019 aa8.54□□□□□ -1.04
CNOT1-216ENST00000569240 UACAQ9BZF9 1416 aa8.54□□□□□ -1.04
CNOT1-216ENST00000569240 MCTP1Q6DN14 999 aa8.54□□□□□ -1.04
CNOT1-216ENST00000569240 SMARCE1Q969G3 411 aa8.54□□□□□ -1.04
CNOT1-216ENST00000569240 HSP90AB4PQ58FF6 505 aa8.54□□□□□ -1.04
CNOT1-216ENST00000569240 DZIP1LQ8IYY4 767 aaKnown RBP8.54□□□□□ -1.04
CNOT1-216ENST00000569240 KRT222Q8N1A0 295 aa8.54□□□□□ -1.04
CNOT1-216ENST00000569240 DCAF11Q8TEB1 546 aa8.54□□□□□ -1.04
CNOT1-216ENST00000569240 SCAPERQ9BY12 1400 aa8.53□□□□□ -1.04
CNOT1-216ENST00000569240 GOLGA6L9A6NEM1 432 aa8.53□□□□□ -1.04
CNOT1-216ENST00000569240 SLC4A3P48751 1232 aa8.53□□□□□ -1.04
CNOT1-216ENST00000569240 SMC3Q9UQE7 1217 aa8.53□□□□□ -1.04
CNOT1-216ENST00000569240 GOLGA6L10A0A0M3HER8 536 aa8.53□□□□□ -1.04
CNOT1-216ENST00000569240 SHTN1A0MZ66 631 aa8.53□□□□□ -1.04
CNOT1-216ENST00000569240 GCC1Q96CN9 775 aa8.53□□□□□ -1.04
CNOT1-216ENST00000569240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.53□□□□□ -1.046e-7■■■■□ 20.8
CNOT1-216ENST00000569240 MSH5O43196 834 aa8.53□□□□□ -1.04
CNOT1-216ENST00000569240 KIAA1328Q86T90 577 aa8.53□□□□□ -1.04
CNOT1-216ENST00000569240 L3MBTL2Q969R5 705 aa8.53□□□□□ -1.04
CNOT1-216ENST00000569240 OFD1O75665 1012 aa8.53□□□□□ -1.04
CNOT1-216ENST00000569240 RBM10P98175 930 aaKnown RBP8.53□□□□□ -1.04
CNOT1-216ENST00000569240 ZNF428Q96B54 188 aa8.53□□□□□ -1.04
CNOT1-216ENST00000569240 UBXN4Q92575 508 aa8.52□□□□□ -1.04
CNOT1-216ENST00000569240 GBP2P32456 591 aaPredicted RBP8.52□□□□□ -1.05
CNOT1-216ENST00000569240 TRIM5Q9C035 493 aa8.52□□□□□ -1.05
CNOT1-216ENST00000569240 K7ELQ4 463 aaPredicted RBP8.52□□□□□ -1.05
CNOT1-216ENST00000569240 SETSIPP0DME0 302 aa8.52□□□□□ -1.05
CNOT1-216ENST00000569240 LUZP1Q86V48 1076 aa8.52□□□□□ -1.05
CNOT1-216ENST00000569240 SPAG9O60271 1321 aaKnown RBP8.52□□□□□ -1.05
CNOT1-216ENST00000569240 HDGFL2Q7Z4V5 671 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms