RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 NCOA1Q15788 1441 aa9.28□□□□□ -0.92
CTDSPL2-204ENST00000558966 ABCC3O15438 1527 aa9.28□□□□□ -0.92
CTDSPL2-204ENST00000558966 MYO3AQ8NEV4 1616 aa9.28□□□□□ -0.92
CTDSPL2-204ENST00000558966 RASEFQ8IZ41 740 aa9.28□□□□□ -0.92
CTDSPL2-204ENST00000558966 FAM212AQ96EL1 285 aa9.28□□□□□ -0.92
CTDSPL2-204ENST00000558966 ANKRD30AQ9BXX3 1397 aa9.28□□□□□ -0.92
CTDSPL2-204ENST00000558966 PZPP20742 1482 aa9.28□□□□□ -0.92
CTDSPL2-204ENST00000558966 PRDM15P57071 1507 aaPredicted RBP9.28□□□□□ -0.92
CTDSPL2-204ENST00000558966 DEPDC5O75140 1603 aa9.28□□□□□ -0.92
CTDSPL2-204ENST00000558966 ZNF142P52746 1687 aaPredicted RBP9.28□□□□□ -0.92
CTDSPL2-204ENST00000558966 CEP152O94986 1710 aa9.27□□□□□ -0.92
CTDSPL2-204ENST00000558966 WASHC2CQ9Y4E1 1318 aa9.27□□□□□ -0.93
CTDSPL2-204ENST00000558966 STRCQ7RTU9 1775 aa9.27□□□□□ -0.93
CTDSPL2-204ENST00000558966 HS6ST3Q8IZP7 471 aa9.27□□□□□ -0.93
CTDSPL2-204ENST00000558966 TSHZ2Q9NRE2 1034 aa9.27□□□□□ -0.93
CTDSPL2-204ENST00000558966 FBXO31Q5XUX0 539 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL2-204ENST00000558966 CEP170BQ9Y4F5 1589 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL2-204ENST00000558966 CAMSAP1Q5T5Y3 1602 aa9.25□□□□□ -0.93
CTDSPL2-204ENST00000558966 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.24□□□□□ -0.93
CTDSPL2-204ENST00000558966 RIOK3O14730 519 aaKnown RBP9.24□□□□□ -0.93
CTDSPL2-204ENST00000558966 TNRQ92752 1358 aa9.24□□□□□ -0.93
CTDSPL2-204ENST00000558966 VWDEQ8N2E2 1590 aa9.24□□□□□ -0.93
CTDSPL2-204ENST00000558966 RRBP1Q9P2E9 1410 aaKnown RBP9.24□□□□□ -0.93
CTDSPL2-204ENST00000558966 SPATA31D1Q6ZQQ2 1576 aa9.23□□□□□ -0.93
CTDSPL2-204ENST00000558966 A2ML1A8K2U0 1454 aa9.23□□□□□ -0.93
CTDSPL2-204ENST00000558966 ROCK1Q13464 1354 aa9.22□□□□□ -0.93
CTDSPL2-204ENST00000558966 ANKRD50Q9ULJ7 1429 aa9.22□□□□□ -0.93
CTDSPL2-204ENST00000558966 ERVK-7P63135 1459 aa9.22□□□□□ -0.93
CTDSPL2-204ENST00000558966 CFAP65Q6ZU64 1925 aaKnown RBP9.22□□□□□ -0.93
CTDSPL2-204ENST00000558966 ARHGAP31Q2M1Z3 1444 aa9.22□□□□□ -0.93
CTDSPL2-204ENST00000558966 LMTK2Q8IWU2 1503 aa9.22□□□□□ -0.93
CTDSPL2-204ENST00000558966 BCANQ96GW7 911 aa9.21□□□□□ -0.93
CTDSPL2-204ENST00000558966 PLA2R1Q13018 1463 aa9.21□□□□□ -0.93
CTDSPL2-204ENST00000558966 CHADLQ6NUI6 762 aa9.21□□□□□ -0.94
CTDSPL2-204ENST00000558966 NLRP1Q9C000 1473 aa9.2□□□□□ -0.94
CTDSPL2-204ENST00000558966 ITGAEP38570 1179 aa9.2□□□□□ -0.94
CTDSPL2-204ENST00000558966 KANK1Q14678 1352 aa9.2□□□□□ -0.94
CTDSPL2-204ENST00000558966 UNC13BO14795 1591 aa9.2□□□□□ -0.94
CTDSPL2-204ENST00000558966 PYGBP11216 843 aa9.19□□□□□ -0.94
CTDSPL2-204ENST00000558966 PTPRTO14522 1441 aa9.19□□□□□ -0.94
CTDSPL2-204ENST00000558966 EFCAB6Q5THR3 1501 aa9.19□□□□□ -0.94
CTDSPL2-204ENST00000558966 NKX1-1Q15270 411 aaPredicted RBP9.19□□□□□ -0.94
CTDSPL2-204ENST00000558966 UGGT1Q9NYU2 1555 aa9.18□□□□□ -0.94
CTDSPL2-204ENST00000558966 STK25O00506 426 aa9.18□□□□□ -0.94
CTDSPL2-204ENST00000558966 NCKAP5LQ9HCH0 1330 aa9.17□□□□□ -0.94
CTDSPL2-204ENST00000558966 CHRM1P11229 460 aaPredicted RBP9.17□□□□□ -0.94
CTDSPL2-204ENST00000558966 TAOK2Q9UL54 1235 aa9.17□□□□□ -0.94
CTDSPL2-204ENST00000558966 POLR1AO95602 1720 aaPredicted RBP9.17□□□□□ -0.94
CTDSPL2-204ENST00000558966 TET3O43151 1660 aa9.17□□□□□ -0.94
CTDSPL2-204ENST00000558966 VGFO15240 615 aaPredicted RBP9.17□□□□□ -0.94
CTDSPL2-204ENST00000558966 SYNMO15061 1565 aa9.17□□□□□ -0.94
CTDSPL2-204ENST00000558966 NEURL4Q96JN8 1562 aa9.17□□□□□ -0.94
CTDSPL2-204ENST00000558966 UBR1Q8IWV7 1749 aa9.16□□□□□ -0.94
CTDSPL2-204ENST00000558966 IQGAP3Q86VI3 1631 aa9.16□□□□□ -0.94
CTDSPL2-204ENST00000558966 NOS1P29475 1434 aa9.16□□□□□ -0.94
CTDSPL2-204ENST00000558966 GCC2Q8IWJ2 1684 aa9.16□□□□□ -0.94
CTDSPL2-204ENST00000558966 PIK3C2BO00750 1634 aa9.14□□□□□ -0.95
CTDSPL2-204ENST00000558966 NAIPQ13075 1403 aa9.14□□□□□ -0.95
CTDSPL2-204ENST00000558966 RPRD2Q5VT52 1461 aaKnown RBP9.14□□□□□ -0.95
CTDSPL2-204ENST00000558966 ILDR1Q86SU0 546 aaPredicted RBP9.14□□□□□ -0.95
CTDSPL2-204ENST00000558966 E9PCH4 1651 aa9.14□□□□□ -0.95
CTDSPL2-204ENST00000558966 LTBP4Q8N2S1 1624 aa9.13□□□□□ -0.95
CTDSPL2-204ENST00000558966 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.13□□□□□ -0.95
CTDSPL2-204ENST00000558966 THEMISQ8N1K5 641 aaPredicted RBP9.13□□□□□ -0.95
CTDSPL2-204ENST00000558966 ZFP91Q96JP5 570 aaPredicted RBP9.13□□□□□ -0.95
CTDSPL2-204ENST00000558966 TSPYL2Q9H2G4 693 aaPredicted RBP9.13□□□□□ -0.95
CTDSPL2-204ENST00000558966 HFM1A2PYH4 1435 aa9.13□□□□□ -0.95
CTDSPL2-204ENST00000558966 BCL11BQ9C0K0 894 aaPredicted RBP9.13□□□□□ -0.95
CTDSPL2-204ENST00000558966 KDM5AP29375 1690 aaKnown RBP9.12□□□□□ -0.95
CTDSPL2-204ENST00000558966 SLIT1O75093 1534 aa9.12□□□□□ -0.95
CTDSPL2-204ENST00000558966 STK24Q9Y6E0 443 aa9.12□□□□□ -0.95
CTDSPL2-204ENST00000558966 NUP155O75694 1391 aa9.12□□□□□ -0.95
CTDSPL2-204ENST00000558966 MED14O60244 1454 aa9.12□□□□□ -0.95
CTDSPL2-204ENST00000558966 ARHGAP23Q9P227 1491 aa9.12□□□□□ -0.95
CTDSPL2-204ENST00000558966 GTPBP6O43824 516 aaPredicted RBP9.11□□□□□ -0.95
CTDSPL2-204ENST00000558966 ANKLE2Q86XL3 938 aa9.11□□□□□ -0.95
CTDSPL2-204ENST00000558966 CERKQ8TCT0 537 aa9.11□□□□□ -0.95
CTDSPL2-204ENST00000558966 FARP1Q9Y4F1 1045 aaPredicted RBP9.11□□□□□ -0.95
CTDSPL2-204ENST00000558966 ADGRB3O60242 1522 aa9.11□□□□□ -0.95
CTDSPL2-204ENST00000558966 IDI1Q13907 227 aa9.11□□□□□ -0.95
CTDSPL2-204ENST00000558966 IQGAP1P46940 1657 aa9.1□□□□□ -0.95
CTDSPL2-204ENST00000558966 NPHP4O75161 1426 aaPredicted RBP9.1□□□□□ -0.95
CTDSPL2-204ENST00000558966 ZNF335Q9H4Z2 1342 aaPredicted RBP9.1□□□□□ -0.95
CTDSPL2-204ENST00000558966 PRKCSHP14314 528 aaPredicted RBP9.1□□□□□ -0.95
CTDSPL2-204ENST00000558966 FBXO41Q8TF61 875 aa9.1□□□□□ -0.95
CTDSPL2-204ENST00000558966 SCAF11Q99590 1463 aaKnown RBP9.09□□□□□ -0.95
CTDSPL2-204ENST00000558966 MYO5BQ9ULV0 1848 aa9.09□□□□□ -0.95
CTDSPL2-204ENST00000558966 SLC52A1Q9NWF4 448 aa9.08□□□□□ -0.96
CTDSPL2-204ENST00000558966 TMEM2Q9UHN6 1383 aa9.08□□□□□ -0.96
CTDSPL2-204ENST00000558966 PRKAR2AP13861 404 aaKnown RBP9.08□□□□□ -0.96
CTDSPL2-204ENST00000558966 LTKP29376 864 aa9.08□□□□□ -0.96
CTDSPL2-204ENST00000558966 SGIP1Q9BQI5 828 aa9.08□□□□□ -0.96
CTDSPL2-204ENST00000558966 TMEM131LA2VDJ0 1609 aa9.08□□□□□ -0.96
CTDSPL2-204ENST00000558966 SPHKAPQ2M3C7 1700 aa9.07□□□□□ -0.96
CTDSPL2-204ENST00000558966 IQSEC2Q5JU85 1478 aa9.06□□□□□ -0.96
CTDSPL2-204ENST00000558966 TXNDC2Q86VQ3 553 aa9.06□□□□□ -0.96
CTDSPL2-204ENST00000558966 STRCP1A6NGW2 1772 aa9.06□□□□□ -0.96
CTDSPL2-204ENST00000558966 ZFYVE9O95405 1425 aa9.05□□□□□ -0.96
CTDSPL2-204ENST00000558966 CPS1P31327 1500 aa9.05□□□□□ -0.96
CTDSPL2-204ENST00000558966 EID1Q9Y6B2 187 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms