RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 NPHP4O75161 1426 aaPredicted RBP15.63■□□□□ 0.09
TMEM260-206ENST00000555046 ROBO1Q9Y6N7 1651 aa15.63■□□□□ 0.09
TMEM260-206ENST00000555046 EID1Q9Y6B2 187 aa15.62■□□□□ 0.09
TMEM260-206ENST00000555046 SETBP1Q9Y6X0 1596 aa15.62■□□□□ 0.09
TMEM260-206ENST00000555046 RAB3GAP2Q9H2M9 1393 aa15.62■□□□□ 0.09
TMEM260-206ENST00000555046 NOS1P29475 1434 aa15.61■□□□□ 0.09
TMEM260-206ENST00000555046 UNC13BO14795 1591 aa15.61■□□□□ 0.09
TMEM260-206ENST00000555046 FAM135BQ49AJ0 1406 aa15.6■□□□□ 0.09
TMEM260-206ENST00000555046 EFCAB6Q5THR3 1501 aa15.58■□□□□ 0.09
TMEM260-206ENST00000555046 CHGAP10645 457 aaKnown RBP15.58■□□□□ 0.08
TMEM260-206ENST00000555046 LRP6O75581 1613 aa15.57■□□□□ 0.08
TMEM260-206ENST00000555046 TXNDC2Q86VQ3 553 aa15.56■□□□□ 0.08
TMEM260-206ENST00000555046 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.56■□□□□ 0.08
TMEM260-206ENST00000555046 CDK12Q9NYV4 1490 aaPredicted RBP15.56■□□□□ 0.08
TMEM260-206ENST00000555046 IQGAP3Q86VI3 1631 aa15.56■□□□□ 0.08
TMEM260-206ENST00000555046 GCC2Q8IWJ2 1684 aa15.56■□□□□ 0.08
TMEM260-206ENST00000555046 TET3O43151 1660 aa15.55■□□□□ 0.08
TMEM260-206ENST00000555046 UGGT1Q9NYU2 1555 aa15.55■□□□□ 0.08
TMEM260-206ENST00000555046 PHLPP1O60346 1717 aa15.54■□□□□ 0.08
TMEM260-206ENST00000555046 CEP152O94986 1710 aa15.54■□□□□ 0.08
TMEM260-206ENST00000555046 TMEM2Q9UHN6 1383 aa15.51■□□□□ 0.07
TMEM260-206ENST00000555046 ZNF326Q5BKZ1 582 aaKnown RBP15.51■□□□□ 0.07
TMEM260-206ENST00000555046 PPP1R15AO75807 674 aaPredicted RBP15.5■□□□□ 0.07
TMEM260-206ENST00000555046 BCANQ96GW7 911 aa15.5■□□□□ 0.07
TMEM260-206ENST00000555046 EP400Q96L91 3159 aa15.49■□□□□ 0.07
TMEM260-206ENST00000555046 RPGRIP1LQ68CZ1 1315 aa15.49■□□□□ 0.07
TMEM260-206ENST00000555046 COL16A1Q07092 1604 aaPredicted RBP15.48■□□□□ 0.07
TMEM260-206ENST00000555046 LTKP29376 864 aa15.48■□□□□ 0.07
TMEM260-206ENST00000555046 JCADQ9P266 1359 aa15.48■□□□□ 0.07
TMEM260-206ENST00000555046 CCDC144AA2RUR9 1427 aa15.47■□□□□ 0.07
TMEM260-206ENST00000555046 VGFO15240 615 aaPredicted RBP15.47■□□□□ 0.07
TMEM260-206ENST00000555046 ZNF772Q68DY9 489 aaPredicted RBP15.47■□□□□ 0.07
TMEM260-206ENST00000555046 RGS12O14924 1447 aa15.46■□□□□ 0.07
TMEM260-206ENST00000555046 CFAP65Q6ZU64 1925 aaKnown RBP15.46■□□□□ 0.07
TMEM260-206ENST00000555046 LRP5O75197 1615 aa15.45■□□□□ 0.06
TMEM260-206ENST00000555046 E9PCH4 1651 aa15.44■□□□□ 0.06
TMEM260-206ENST00000555046 SLIT1O75093 1534 aa15.43■□□□□ 0.06
TMEM260-206ENST00000555046 RXRBP28702 533 aa15.43■□□□□ 0.06
TMEM260-206ENST00000555046 STAC3Q96MF2 364 aa15.43■□□□□ 0.06
TMEM260-206ENST00000555046 PCGF6Q9BYE7 350 aa15.43■□□□□ 0.06
TMEM260-206ENST00000555046 SCAF11Q99590 1463 aaKnown RBP15.43■□□□□ 0.06
TMEM260-206ENST00000555046 ARHGAP23Q9P227 1491 aa15.43■□□□□ 0.06
TMEM260-206ENST00000555046 RIMS2Q9UQ26 1411 aa15.43■□□□□ 0.06
TMEM260-206ENST00000555046 RGL3Q3MIN7 710 aa15.42■□□□□ 0.06
TMEM260-206ENST00000555046 ZRANB1Q9UGI0 708 aa15.42■□□□□ 0.06
TMEM260-206ENST00000555046 TRPM2O94759 1503 aa15.42■□□□□ 0.06
TMEM260-206ENST00000555046 SHPRHQ149N8 1683 aa15.41■□□□□ 0.06
TMEM260-206ENST00000555046 ANKRD30BQ9BXX2 1392 aa15.41■□□□□ 0.06
TMEM260-206ENST00000555046 TBX22Q9Y458 520 aa15.41■□□□□ 0.06
TMEM260-206ENST00000555046 ADGRB3O60242 1522 aa15.4■□□□□ 0.06
TMEM260-206ENST00000555046 KDM5AP29375 1690 aaKnown RBP15.4■□□□□ 0.06
TMEM260-206ENST00000555046 RBM33Q96EV2 1170 aaKnown RBP15.39■□□□□ 0.05
TMEM260-206ENST00000555046 PIK3C2BO00750 1634 aa15.39■□□□□ 0.05
TMEM260-206ENST00000555046 PLEKHG1Q9ULL1 1385 aa15.38■□□□□ 0.05
TMEM260-206ENST00000555046 IFFO2Q5TF58 517 aa15.38■□□□□ 0.05
TMEM260-206ENST00000555046 MEX3CQ5U5Q3 659 aaKnown RBP15.38■□□□□ 0.05
TMEM260-206ENST00000555046 NUTM2DQ5VT03 806 aaPredicted RBP15.38■□□□□ 0.05
TMEM260-206ENST00000555046 SLC26A8Q96RN1 970 aa15.37■□□□□ 0.05
TMEM260-206ENST00000555046 UBR1Q8IWV7 1749 aa15.37■□□□□ 0.05
TMEM260-206ENST00000555046 ZFYVE9O95405 1425 aa15.36■□□□□ 0.05
TMEM260-206ENST00000555046 SPATA31A6Q5VVP1 1343 aa15.36■□□□□ 0.05
TMEM260-206ENST00000555046 KCNA6P17658 529 aa15.35■□□□□ 0.05
TMEM260-206ENST00000555046 TMEM131LA2VDJ0 1609 aa15.35■□□□□ 0.05
TMEM260-206ENST00000555046 TMEM94Q12767 1356 aa15.35■□□□□ 0.05
TMEM260-206ENST00000555046 SPHKAPQ2M3C7 1700 aa15.34■□□□□ 0.05
TMEM260-206ENST00000555046 DCAF11Q8TEB1 546 aa15.31■□□□□ 0.04
TMEM260-206ENST00000555046 ATAD2Q6PL18 1390 aa15.31■□□□□ 0.04
TMEM260-206ENST00000555046 PIK3R4Q99570 1358 aa15.31■□□□□ 0.04
TMEM260-206ENST00000555046 SPATA31E1Q6ZUB1 1445 aa15.31■□□□□ 0.04
TMEM260-206ENST00000555046 CLTCL1P53675 1640 aa15.3■□□□□ 0.04
TMEM260-206ENST00000555046 DHX57Q6P158 1386 aaKnown RBP15.29■□□□□ 0.04
TMEM260-206ENST00000555046 AHDC1Q5TGY3 1603 aaPredicted RBP15.28■□□□□ 0.04
TMEM260-206ENST00000555046 NUTM2BA6NNL0 878 aaPredicted RBP15.28■□□□□ 0.04
TMEM260-206ENST00000555046 NUTM2EB1AL46 878 aaPredicted RBP15.28■□□□□ 0.04
TMEM260-206ENST00000555046 NEUROD1Q13562 356 aa15.28■□□□□ 0.04
TMEM260-206ENST00000555046 PROSER2Q86WR7 435 aaPredicted RBP15.28■□□□□ 0.04
TMEM260-206ENST00000555046 NUTM2AQ8IVF1 878 aaPredicted RBP15.28■□□□□ 0.04
TMEM260-206ENST00000555046 KDM2AQ9Y2K7 1162 aa15.28■□□□□ 0.04
TMEM260-206ENST00000555046 DIP2AQ14689 1571 aa15.28■□□□□ 0.04
TMEM260-206ENST00000555046 AFF2P51816 1311 aa15.27■□□□□ 0.04
TMEM260-206ENST00000555046 AMOTL2Q9Y2J4 779 aa15.27■□□□□ 0.04
TMEM260-206ENST00000555046 ADGRF5Q8IZF2 1346 aa15.26■□□□□ 0.03
TMEM260-206ENST00000555046 NHSL1Q5SYE7 1610 aa15.25■□□□□ 0.03
TMEM260-206ENST00000555046 CLSPNQ9HAW4 1339 aa15.25■□□□□ 0.03
TMEM260-206ENST00000555046 NWD1Q149M9 1564 aa15.25■□□□□ 0.03
TMEM260-206ENST00000555046 C14orf93Q9H972 538 aaKnown RBP15.25■□□□□ 0.03
TMEM260-206ENST00000555046 ADAMTS13Q76LX8 1427 aa15.25■□□□□ 0.03
TMEM260-206ENST00000555046 KIF1BO60333 1816 aa15.24■□□□□ 0.03
TMEM260-206ENST00000555046 SIN3AQ96ST3 1273 aa15.24■□□□□ 0.03
TMEM260-206ENST00000555046 NEXMIFQ5QGS0 1516 aa15.22■□□□□ 0.03
TMEM260-206ENST00000555046 NKTRP30414 1462 aaKnown RBP15.22■□□□□ 0.03
TMEM260-206ENST00000555046 RBM6P78332 1123 aaKnown RBP15.22■□□□□ 0.03
TMEM260-206ENST00000555046 C14orf37Q86TY3 774 aa15.21■□□□□ 0.03
TMEM260-206ENST00000555046 TIMELESSQ9UNS1 1208 aa15.21■□□□□ 0.03
TMEM260-206ENST00000555046 NCOA3Q9Y6Q9 1424 aa15.2■□□□□ 0.02
TMEM260-206ENST00000555046 CCER1Q8TC90 406 aaPredicted RBP15.2■□□□□ 0.02
TMEM260-206ENST00000555046 L3MBTL2Q969R5 705 aa15.2■□□□□ 0.02
TMEM260-206ENST00000555046 SLAIN2Q9P270 581 aa15.2■□□□□ 0.02
TMEM260-206ENST00000555046 METP08581 1390 aa15.2■□□□□ 0.02
TMEM260-206ENST00000555046 MSH6P52701 1360 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms