RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 FBXO31Q5XUX0 539 aaPredicted RBP11.19□□□□□ -0.62
CPSF7-224ENST00000544990 MYO3AQ8NEV4 1616 aa11.19□□□□□ -0.62
CPSF7-224ENST00000544990 CFAP65Q6ZU64 1925 aaKnown RBP11.19□□□□□ -0.62
CPSF7-224ENST00000544990 PRDM15P57071 1507 aaPredicted RBP11.19□□□□□ -0.62
CPSF7-224ENST00000544990 ROCK1Q13464 1354 aa11.18□□□□□ -0.62
CPSF7-224ENST00000544990 TNRQ92752 1358 aa11.18□□□□□ -0.62
CPSF7-224ENST00000544990 DEPDC5O75140 1603 aa11.18□□□□□ -0.62
CPSF7-224ENST00000544990 PITPNM1O00562 1244 aa11.18□□□□□ -0.62
CPSF7-224ENST00000544990 BBXQ8WY36 941 aaPredicted RBP11.18□□□□□ -0.62
CPSF7-224ENST00000544990 RRBP1Q9P2E9 1410 aaKnown RBP11.18□□□□□ -0.62
CPSF7-224ENST00000544990 ZNF142P52746 1687 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-224ENST00000544990 CAMSAP1Q5T5Y3 1602 aa11.17□□□□□ -0.62
CPSF7-224ENST00000544990 CEP170BQ9Y4F5 1589 aaPredicted RBP11.17□□□□□ -0.62
CPSF7-224ENST00000544990 FAM212AQ96EL1 285 aa11.17□□□□□ -0.62
CPSF7-224ENST00000544990 STRCQ7RTU9 1775 aa11.16□□□□□ -0.62
CPSF7-224ENST00000544990 HAP1P54257 671 aaPredicted RBP11.16□□□□□ -0.62
CPSF7-224ENST00000544990 A2ML1A8K2U0 1454 aa11.16□□□□□ -0.62
CPSF7-224ENST00000544990 NUBP1P53384 320 aa11.15□□□□□ -0.62
CPSF7-224ENST00000544990 ARHGAP31Q2M1Z3 1444 aa11.15□□□□□ -0.62
CPSF7-224ENST00000544990 SPATA31D1Q6ZQQ2 1576 aa11.15□□□□□ -0.62
CPSF7-224ENST00000544990 NLRP1Q9C000 1473 aa11.14□□□□□ -0.63
CPSF7-224ENST00000544990 THEMISQ8N1K5 641 aaPredicted RBP11.14□□□□□ -0.63
CPSF7-224ENST00000544990 TAOK2Q9UL54 1235 aa11.14□□□□□ -0.63
CPSF7-224ENST00000544990 LMTK2Q8IWU2 1503 aa11.14□□□□□ -0.63
CPSF7-224ENST00000544990 ERVK-7P63135 1459 aa11.13□□□□□ -0.63
CPSF7-224ENST00000544990 VWDEQ8N2E2 1590 aa11.13□□□□□ -0.63
CPSF7-224ENST00000544990 PLA2R1Q13018 1463 aa11.12□□□□□ -0.63
CPSF7-224ENST00000544990 PTPRTO14522 1441 aa11.12□□□□□ -0.63
CPSF7-224ENST00000544990 UGGT1Q9NYU2 1555 aa11.11□□□□□ -0.63
CPSF7-224ENST00000544990 UNC13BO14795 1591 aa11.11□□□□□ -0.63
CPSF7-224ENST00000544990 NCKAP5LQ9HCH0 1330 aa11.1□□□□□ -0.63
CPSF7-224ENST00000544990 CHGAP10645 457 aaKnown RBP11.1□□□□□ -0.63
CPSF7-224ENST00000544990 EFCAB6Q5THR3 1501 aa11.09□□□□□ -0.63
CPSF7-224ENST00000544990 TET3O43151 1660 aa11.09□□□□□ -0.63
CPSF7-224ENST00000544990 ANKLE2Q86XL3 938 aa11.09□□□□□ -0.63
CPSF7-224ENST00000544990 GCC2Q8IWJ2 1684 aa11.08□□□□□ -0.64
CPSF7-224ENST00000544990 RPRD2Q5VT52 1461 aaKnown RBP11.08□□□□□ -0.64
CPSF7-224ENST00000544990 NUP155O75694 1391 aa11.08□□□□□ -0.64
CPSF7-224ENST00000544990 MNX1P50219 401 aaPredicted RBP11.08□□□□□ -0.64
CPSF7-224ENST00000544990 POLR1AO95602 1720 aaPredicted RBP11.07□□□□□ -0.64
CPSF7-224ENST00000544990 IQGAP3Q86VI3 1631 aa11.07□□□□□ -0.64
CPSF7-224ENST00000544990 UBR1Q8IWV7 1749 aa11.06□□□□□ -0.64
CPSF7-224ENST00000544990 PAXIP1Q6ZW49 1069 aaPredicted RBP11.06□□□□□ -0.64
CPSF7-224ENST00000544990 CFAP44Q96MT7 982 aa11.06□□□□□ -0.64
CPSF7-224ENST00000544990 SLC52A1Q9NWF4 448 aa11.06□□□□□ -0.64
CPSF7-224ENST00000544990 NOS1P29475 1434 aa11.06□□□□□ -0.64
CPSF7-224ENST00000544990 NAIPQ13075 1403 aa11.06□□□□□ -0.64
CPSF7-224ENST00000544990 IDI1Q13907 227 aa11.05□□□□□ -0.64
CPSF7-224ENST00000544990 CERKQ8TCT0 537 aa11.05□□□□□ -0.64
CPSF7-224ENST00000544990 PIK3C2BO00750 1634 aa11.05□□□□□ -0.64
CPSF7-224ENST00000544990 HFM1A2PYH4 1435 aa11.04□□□□□ -0.64
CPSF7-224ENST00000544990 EID1Q9Y6B2 187 aa11.04□□□□□ -0.64
CPSF7-224ENST00000544990 E9PCH4 1651 aa11.04□□□□□ -0.64
CPSF7-224ENST00000544990 KDM5AP29375 1690 aaKnown RBP11.04□□□□□ -0.64
CPSF7-224ENST00000544990 SYNMO15061 1565 aa11.03□□□□□ -0.64
CPSF7-224ENST00000544990 SPRYD3Q8NCJ5 442 aa11.03□□□□□ -0.64
CPSF7-224ENST00000544990 TRIM52Q96A61 297 aa11.03□□□□□ -0.64
CPSF7-224ENST00000544990 MED14O60244 1454 aa11.02□□□□□ -0.65
CPSF7-224ENST00000544990 RIOK3O14730 519 aaKnown RBP11.02□□□□□ -0.65
CPSF7-224ENST00000544990 TXNDC2Q86VQ3 553 aa11.02□□□□□ -0.65
CPSF7-224ENST00000544990 RASEFQ8IZ41 740 aa11.02□□□□□ -0.65
CPSF7-224ENST00000544990 NEURL4Q96JN8 1562 aa11.02□□□□□ -0.65
CPSF7-224ENST00000544990 NPHP4O75161 1426 aaPredicted RBP11.01□□□□□ -0.65
CPSF7-224ENST00000544990 SLIT1O75093 1534 aa11.01□□□□□ -0.65
CPSF7-224ENST00000544990 TMEM2Q9UHN6 1383 aa11.01□□□□□ -0.65
CPSF7-224ENST00000544990 SCAF11Q99590 1463 aaKnown RBP11□□□□□ -0.65
CPSF7-224ENST00000544990 ARHGAP23Q9P227 1491 aa11□□□□□ -0.65
CPSF7-224ENST00000544990 CHRM1P11229 460 aaPredicted RBP11□□□□□ -0.65
CPSF7-224ENST00000544990 HDGFP51858 240 aaKnown RBP11□□□□□ -0.65
CPSF7-224ENST00000544990 IQGAP1P46940 1657 aa11□□□□□ -0.65
CPSF7-224ENST00000544990 ZNF335Q9H4Z2 1342 aaPredicted RBP11□□□□□ -0.65
CPSF7-224ENST00000544990 ACIN1Q9UKV3 1341 aaKnown RBP11□□□□□ -0.65
CPSF7-224ENST00000544990 ADGRB3O60242 1522 aa10.99□□□□□ -0.65
CPSF7-224ENST00000544990 LTBP4Q8N2S1 1624 aa10.99□□□□□ -0.65
CPSF7-224ENST00000544990 LTKP29376 864 aa10.99□□□□□ -0.65
CPSF7-224ENST00000544990 CHADLQ6NUI6 762 aa10.99□□□□□ -0.65
CPSF7-224ENST00000544990 HS6ST3Q8IZP7 471 aa10.98□□□□□ -0.65
CPSF7-224ENST00000544990 VSIG10Q8N0Z9 540 aa10.98□□□□□ -0.65
CPSF7-224ENST00000544990 SPHKAPQ2M3C7 1700 aa10.98□□□□□ -0.65
CPSF7-224ENST00000544990 MYO5BQ9ULV0 1848 aa10.98□□□□□ -0.65
CPSF7-224ENST00000544990 FARP1Q9Y4F1 1045 aaPredicted RBP10.97□□□□□ -0.65
CPSF7-224ENST00000544990 IQSEC2Q5JU85 1478 aa10.97□□□□□ -0.65
CPSF7-224ENST00000544990 TMEM131LA2VDJ0 1609 aa10.96□□□□□ -0.65
CPSF7-224ENST00000544990 VGFO15240 615 aaPredicted RBP10.96□□□□□ -0.65
CPSF7-224ENST00000544990 PRKAR2AP13861 404 aaKnown RBP10.96□□□□□ -0.65
CPSF7-224ENST00000544990 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.96□□□□□ -0.65
CPSF7-224ENST00000544990 SETD5Q9C0A6 1442 aa10.95□□□□□ -0.66
CPSF7-224ENST00000544990 PPP1R15AO75807 674 aaPredicted RBP10.95□□□□□ -0.66
CPSF7-224ENST00000544990 RNF25Q96BH1 459 aaPredicted RBP10.95□□□□□ -0.66
CPSF7-224ENST00000544990 BCANQ96GW7 911 aa10.95□□□□□ -0.66
CPSF7-224ENST00000544990 CPS1P31327 1500 aa10.94□□□□□ -0.66
CPSF7-224ENST00000544990 PYGBP11216 843 aa10.94□□□□□ -0.66
CPSF7-224ENST00000544990 RIMS2Q9UQ26 1411 aa10.93□□□□□ -0.66
CPSF7-224ENST00000544990 TSPYL2Q9H2G4 693 aaPredicted RBP10.93□□□□□ -0.66
CPSF7-224ENST00000544990 KIF1BO60333 1816 aa10.93□□□□□ -0.66
CPSF7-224ENST00000544990 ZNF326Q5BKZ1 582 aaKnown RBP10.92□□□□□ -0.66
CPSF7-224ENST00000544990 MPHOSPH9Q99550 1183 aa10.92□□□□□ -0.66
CPSF7-224ENST00000544990 TRPM2O94759 1503 aa10.92□□□□□ -0.66
CPSF7-224ENST00000544990 ZFYVE9O95405 1425 aa10.92□□□□□ -0.66
CPSF7-224ENST00000544990 STK25O00506 426 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms