RNA–Protein interactions for RNA: ENST00000539945.5

MDH1-215, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-215ENST00000539945 NUP155O75694 1391 aa13.96□□□□□ -0.18
MDH1-215ENST00000539945 ANKRD30BQ9BXX2 1392 aa13.96□□□□□ -0.18
MDH1-215ENST00000539945 ERBINQ96RT1 1412 aa13.95□□□□□ -0.18
MDH1-215ENST00000539945 ZFYVE16Q7Z3T8 1539 aa13.95□□□□□ -0.18
MDH1-215ENST00000539945 ZNF316A6NFI3 1004 aaPredicted RBP13.95□□□□□ -0.18
MDH1-215ENST00000539945 TMEM121BQ9BXQ6 578 aaPredicted RBP13.95□□□□□ -0.18
MDH1-215ENST00000539945 NEO1Q92859 1461 aa13.94□□□□□ -0.18
MDH1-215ENST00000539945 INO80Q9ULG1 1556 aaPredicted RBP13.94□□□□□ -0.18
MDH1-215ENST00000539945 IRX5P78411 483 aaPredicted RBP13.94□□□□□ -0.18
MDH1-215ENST00000539945 TONSLQ96HA7 1378 aa13.94□□□□□ -0.18
MDH1-215ENST00000539945 UNC13BO14795 1591 aa13.94□□□□□ -0.18
MDH1-215ENST00000539945 MAP3K4Q9Y6R4 1608 aa13.94□□□□□ -0.18
MDH1-215ENST00000539945 OCEL1Q9H607 264 aa13.93□□□□□ -0.18
MDH1-215ENST00000539945 PPP1R15AO75807 674 aaPredicted RBP13.92□□□□□ -0.18
MDH1-215ENST00000539945 ZNF518AQ6AHZ1 1483 aa13.92□□□□□ -0.18
MDH1-215ENST00000539945 ATP7AQ04656 1500 aa13.92□□□□□ -0.18
MDH1-215ENST00000539945 PKD2Q13563 968 aa13.9□□□□□ -0.18
MDH1-215ENST00000539945 RPRD2Q5VT52 1461 aaKnown RBP13.9□□□□□ -0.18
MDH1-215ENST00000539945 MAGI2Q86UL8 1455 aa13.9□□□□□ -0.18
MDH1-215ENST00000539945 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.9□□□□□ -0.19
MDH1-215ENST00000539945 DIP2BQ9P265 1576 aa13.89□□□□□ -0.19
MDH1-215ENST00000539945 FAM135AQ9P2D6 1515 aa13.89□□□□□ -0.19
MDH1-215ENST00000539945 POGZQ7Z3K3 1410 aa13.89□□□□□ -0.19
MDH1-215ENST00000539945 KDM5CP41229 1560 aa13.89□□□□□ -0.19
MDH1-215ENST00000539945 DCAF8Q5TAQ9 597 aa13.88□□□□□ -0.19
MDH1-215ENST00000539945 IQGAP3Q86VI3 1631 aa13.87□□□□□ -0.19
MDH1-215ENST00000539945 KIDINS220Q9ULH0 1771 aa13.87□□□□□ -0.19
MDH1-215ENST00000539945 MLH3Q9UHC1 1453 aa13.87□□□□□ -0.19
MDH1-215ENST00000539945 FAM69CQ0P6D2 419 aa13.86□□□□□ -0.19
MDH1-215ENST00000539945 DHX29Q7Z478 1369 aaKnown RBP13.86□□□□□ -0.19
MDH1-215ENST00000539945 EIF2AK4Q9P2K8 1649 aaKnown RBP13.84□□□□□ -0.19
MDH1-215ENST00000539945 DEPDC5O75140 1603 aa13.84□□□□□ -0.19
MDH1-215ENST00000539945 HECW2Q9P2P5 1572 aa13.83□□□□□ -0.2
MDH1-215ENST00000539945 L3MBTL2Q969R5 705 aa13.82□□□□□ -0.2
MDH1-215ENST00000539945 MYT1LQ9UL68 1186 aa13.82□□□□□ -0.2
MDH1-215ENST00000539945 TEX14Q8IWB6 1497 aa13.82□□□□□ -0.2
MDH1-215ENST00000539945 PYGBP11216 843 aa13.81□□□□□ -0.2
MDH1-215ENST00000539945 A2MP01023 1474 aa13.81□□□□□ -0.2
MDH1-215ENST00000539945 RICTORQ6R327 1708 aa13.8□□□□□ -0.2
MDH1-215ENST00000539945 PPRC1Q5VV67 1664 aaKnown RBP13.8□□□□□ -0.2
MDH1-215ENST00000539945 DIEXFQ68CQ4 756 aaKnown RBP13.8□□□□□ -0.2
MDH1-215ENST00000539945 VWDEQ8N2E2 1590 aa13.79□□□□□ -0.2
MDH1-215ENST00000539945 ATP10AO60312 1499 aa13.79□□□□□ -0.2
MDH1-215ENST00000539945 RAPGEF3O95398 923 aa13.79□□□□□ -0.2
MDH1-215ENST00000539945 KANK1Q14678 1352 aa13.78□□□□□ -0.2
MDH1-215ENST00000539945 PRDM15P57071 1507 aaPredicted RBP13.78□□□□□ -0.2
MDH1-215ENST00000539945 KIF3BO15066 747 aa13.78□□□□□ -0.2
MDH1-215ENST00000539945 DNAJC5Q9H3Z4 198 aa13.78□□□□□ -0.2
MDH1-215ENST00000539945 FBXO3Q9UK99 471 aa13.78□□□□□ -0.2
MDH1-215ENST00000539945 KIF13AQ9H1H9 1805 aa13.77□□□□□ -0.2
MDH1-215ENST00000539945 GOLGA2Q08379 1002 aa13.77□□□□□ -0.21
MDH1-215ENST00000539945 PLA2R1Q13018 1463 aa13.77□□□□□ -0.21
MDH1-215ENST00000539945 ABCA6Q8N139 1617 aa13.77□□□□□ -0.21
MDH1-215ENST00000539945 MROH1Q8NDA8 1641 aa13.77□□□□□ -0.21
MDH1-215ENST00000539945 BCORL1Q5H9F3 1711 aa13.76□□□□□ -0.21
MDH1-215ENST00000539945 FRMPD1Q5SYB0 1578 aa13.76□□□□□ -0.21
MDH1-215ENST00000539945 MMRN1Q13201 1228 aa13.76□□□□□ -0.21
MDH1-215ENST00000539945 FKBP8Q14318 412 aa13.76□□□□□ -0.21
MDH1-215ENST00000539945 C3orf67Q6ZVT6 689 aa13.76□□□□□ -0.21
MDH1-215ENST00000539945 RNF17Q9BXT8 1623 aaKnown RBP13.76□□□□□ -0.21
MDH1-215ENST00000539945 ZMYM4Q5VZL5 1548 aa13.76□□□□□ -0.21
MDH1-215ENST00000539945 TET3O43151 1660 aa13.75□□□□□ -0.21
MDH1-215ENST00000539945 TSPOAP1O95153 1857 aa13.75□□□□□ -0.21
MDH1-215ENST00000539945 DIP2CQ9Y2E4 1556 aa13.75□□□□□ -0.21
MDH1-215ENST00000539945 CCDC144AA2RUR9 1427 aa13.75□□□□□ -0.21
MDH1-215ENST00000539945 SPNS2Q8IVW8 549 aa13.74□□□□□ -0.21
MDH1-215ENST00000539945 L3MBTL3Q96JM7 780 aaPredicted RBP13.74□□□□□ -0.21
MDH1-215ENST00000539945 E9PCH4 1651 aa13.74□□□□□ -0.21
MDH1-215ENST00000539945 ZNF467Q7Z7K2 595 aaPredicted RBP13.73□□□□□ -0.21
MDH1-215ENST00000539945 PCDHB8Q9UN66 801 aa13.73□□□□□ -0.21
MDH1-215ENST00000539945 LMTK2Q8IWU2 1503 aa13.73□□□□□ -0.21
MDH1-215ENST00000539945 MKRN3Q13064 507 aaKnown RBP13.73□□□□□ -0.21
MDH1-215ENST00000539945 GSE1Q14687 1217 aa13.72□□□□□ -0.21
MDH1-215ENST00000539945 PTPRTO14522 1441 aa13.71□□□□□ -0.21
MDH1-215ENST00000539945 NBPF8Q3BBV2 869 aa13.71□□□□□ -0.22
MDH1-215ENST00000539945 UHRF1BP1Q6BDS2 1440 aa13.7□□□□□ -0.22
MDH1-215ENST00000539945 YEATS2Q9ULM3 1422 aa13.7□□□□□ -0.22
MDH1-215ENST00000539945 TRPM2O94759 1503 aa13.69□□□□□ -0.22
MDH1-215ENST00000539945 EFCAB6Q5THR3 1501 aa13.69□□□□□ -0.22
MDH1-215ENST00000539945 MARVELD3Q96A59 401 aa13.69□□□□□ -0.22
MDH1-215ENST00000539945 SPHKAPQ2M3C7 1700 aa13.68□□□□□ -0.22
MDH1-215ENST00000539945 REREQ9P2R6 1566 aa13.66□□□□□ -0.22
MDH1-215ENST00000539945 EMP3P54852 163 aa13.65□□□□□ -0.22
MDH1-215ENST00000539945 CEP152O94986 1710 aa13.65□□□□□ -0.22
MDH1-215ENST00000539945 SPATA31E1Q6ZUB1 1445 aa13.65□□□□□ -0.22
MDH1-215ENST00000539945 EIF4G2P78344 907 aaKnown RBP eCLIP13.64□□□□□ -0.23
MDH1-215ENST00000539945 GGT6Q6P531 493 aa13.64□□□□□ -0.23
MDH1-215ENST00000539945 DCAF11Q8TEB1 546 aa13.64□□□□□ -0.23
MDH1-215ENST00000539945 ABCC3O15438 1527 aa13.64□□□□□ -0.23
MDH1-215ENST00000539945 COL17A1Q9UMD9 1497 aaPredicted RBP13.64□□□□□ -0.23
MDH1-215ENST00000539945 PDCD7Q8N8D1 485 aaKnown RBP13.64□□□□□ -0.23
MDH1-215ENST00000539945 WASHC2CQ9Y4E1 1318 aa13.63□□□□□ -0.23
MDH1-215ENST00000539945 RALGAPBQ86X10 1494 aa13.63□□□□□ -0.23
MDH1-215ENST00000539945 HSPA5P11021 654 aaKnown RBP13.63□□□□□ -0.23
MDH1-215ENST00000539945 KLHL34Q8N239 644 aa13.63□□□□□ -0.23
MDH1-215ENST00000539945 NEURL4Q96JN8 1562 aa13.62□□□□□ -0.23
MDH1-215ENST00000539945 AGLP35573 1532 aa13.62□□□□□ -0.23
MDH1-215ENST00000539945 ZC3H13Q5T200 1668 aaKnown RBP13.62□□□□□ -0.23
MDH1-215ENST00000539945 CLTCL1P53675 1640 aa13.62□□□□□ -0.23
MDH1-215ENST00000539945 HIRIP3Q9BW71 556 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms