RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 VSIG10Q8N0Z9 540 aa17.32■□□□□ 0.36
DDX55-206ENST00000539934 ADGBQ8N7X0 1667 aa17.32■□□□□ 0.36
DDX55-206ENST00000539934 DHX29Q7Z478 1369 aaKnown RBP17.32■□□□□ 0.36
DDX55-206ENST00000539934 MBD5Q9P267 1494 aa17.32■□□□□ 0.36
DDX55-206ENST00000539934 VWDEQ8N2E2 1590 aa17.31■□□□□ 0.36
DDX55-206ENST00000539934 THEMISQ8N1K5 641 aaPredicted RBP17.31■□□□□ 0.36
DDX55-206ENST00000539934 DAPK1P53355 1430 aa17.31■□□□□ 0.36
DDX55-206ENST00000539934 CAMSAP2Q08AD1 1489 aa17.31■□□□□ 0.36
DDX55-206ENST00000539934 RRP7BPQ9NSQ0 103 aa17.31■□□□□ 0.36
DDX55-206ENST00000539934 NPHP4O75161 1426 aaPredicted RBP17.3■□□□□ 0.36
DDX55-206ENST00000539934 RGS17Q9UGC6 210 aaPredicted RBP17.29■□□□□ 0.36
DDX55-206ENST00000539934 UGGT1Q9NYU2 1555 aa17.28■□□□□ 0.36
DDX55-206ENST00000539934 PAXIP1Q6ZW49 1069 aaPredicted RBP17.28■□□□□ 0.36
DDX55-206ENST00000539934 STRCP1A6NGW2 1772 aa17.28■□□□□ 0.36
DDX55-206ENST00000539934 ABCC5O15440 1437 aa17.27■□□□□ 0.36
DDX55-206ENST00000539934 PZPP20742 1482 aa17.27■□□□□ 0.36
DDX55-206ENST00000539934 NAP1L5Q96NT1 182 aaPredicted RBP17.27■□□□□ 0.35
DDX55-206ENST00000539934 MSH5O43196 834 aa17.25■□□□□ 0.35
DDX55-206ENST00000539934 CFAP65Q6ZU64 1925 aaKnown RBP17.25■□□□□ 0.35
DDX55-206ENST00000539934 KDM5DQ9BY66 1539 aa17.25■□□□□ 0.35
DDX55-206ENST00000539934 ZNF316A6NFI3 1004 aaPredicted RBP17.25■□□□□ 0.35
DDX55-206ENST00000539934 FAM135AQ9P2D6 1515 aa17.25■□□□□ 0.35
DDX55-206ENST00000539934 LRRC7Q96NW7 1537 aa17.24■□□□□ 0.35
DDX55-206ENST00000539934 RBM19Q9Y4C8 960 aaKnown RBP17.24■□□□□ 0.35
DDX55-206ENST00000539934 ROCK1Q13464 1354 aa17.24■□□□□ 0.35
DDX55-206ENST00000539934 FANCIQ9NVI1 1328 aa17.24■□□□□ 0.35
DDX55-206ENST00000539934 RBM33Q96EV2 1170 aaKnown RBP17.23■□□□□ 0.35
DDX55-206ENST00000539934 CROCC2H7BZ55 1655 aa17.23■□□□□ 0.35
DDX55-206ENST00000539934 RTEL1-TNFRSF6BF6WH68 1400 aa17.22■□□□□ 0.35
DDX55-206ENST00000539934 IQGAP1P46940 1657 aa17.22■□□□□ 0.35
DDX55-206ENST00000539934 MED14O60244 1454 aa17.2■□□□□ 0.34
DDX55-206ENST00000539934 IL27Q8NEV9 243 aa17.2■□□□□ 0.34
DDX55-206ENST00000539934 SIN3AQ96ST3 1273 aa17.2■□□□□ 0.34
DDX55-206ENST00000539934 CCDC141Q6ZP82 1450 aa17.19■□□□□ 0.34
DDX55-206ENST00000539934 NLRP1Q9C000 1473 aa17.19■□□□□ 0.34
DDX55-206ENST00000539934 POTEAQ6S8J7 498 aa17.19■□□□□ 0.34
DDX55-206ENST00000539934 BCCIPQ9P287 314 aaKnown RBP eCLIP17.19■□□□□ 0.34
DDX55-206ENST00000539934 LTKP29376 864 aa17.19■□□□□ 0.34
DDX55-206ENST00000539934 TRIM52Q96A61 297 aa17.19■□□□□ 0.34
DDX55-206ENST00000539934 TPRNQ4KMQ1 711 aa17.18■□□□□ 0.34
DDX55-206ENST00000539934 TSPY4P0CV99 314 aa17.17■□□□□ 0.34
DDX55-206ENST00000539934 TSPY10P0CW01 314 aa17.17■□□□□ 0.34
DDX55-206ENST00000539934 DEPDC5O75140 1603 aa17.17■□□□□ 0.34
DDX55-206ENST00000539934 HSP90B1P14625 803 aaKnown RBP17.16■□□□□ 0.34
DDX55-206ENST00000539934 TXNDC2Q86VQ3 553 aa17.16■□□□□ 0.34
DDX55-206ENST00000539934 RNF17Q9BXT8 1623 aaKnown RBP17.14■□□□□ 0.33
DDX55-206ENST00000539934 ADGRL2O95490 1459 aa17.14■□□□□ 0.33
DDX55-206ENST00000539934 CDK11BP21127 795 aaKnown RBP17.13■□□□□ 0.33
DDX55-206ENST00000539934 ANKRD30AQ9BXX3 1397 aa17.13■□□□□ 0.33
DDX55-206ENST00000539934 ARHGEF5Q12774 1597 aa17.12■□□□□ 0.33
DDX55-206ENST00000539934 ABCC3O15438 1527 aa17.12■□□□□ 0.33
DDX55-206ENST00000539934 ERVK-7P63135 1459 aa17.11■□□□□ 0.33
DDX55-206ENST00000539934 ZC3H13Q5T200 1668 aaKnown RBP17.1■□□□□ 0.33
DDX55-206ENST00000539934 KCNA4P22459 653 aa17.1■□□□□ 0.33
DDX55-206ENST00000539934 BCANQ96GW7 911 aa17.1■□□□□ 0.33
DDX55-206ENST00000539934 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.337e-10■■■■□ 26.7
DDX55-206ENST00000539934 NAP1L2Q9ULW6 460 aaPredicted RBP17.1■□□□□ 0.33
DDX55-206ENST00000539934 XIRP1Q702N8 1843 aaKnown RBP17.09■□□□□ 0.33
DDX55-206ENST00000539934 SCAF11Q99590 1463 aaKnown RBP17.09■□□□□ 0.33
DDX55-206ENST00000539934 SLC26A8Q96RN1 970 aa17.09■□□□□ 0.33
DDX55-206ENST00000539934 MPHOSPH9Q99550 1183 aa17.09■□□□□ 0.33
DDX55-206ENST00000539934 CEP152O94986 1710 aa17.08■□□□□ 0.33
DDX55-206ENST00000539934 SYNMO15061 1565 aa17.08■□□□□ 0.32
DDX55-206ENST00000539934 TONSLQ96HA7 1378 aa17.08■□□□□ 0.32
DDX55-206ENST00000539934 UBR1Q8IWV7 1749 aa17.08■□□□□ 0.32
DDX55-206ENST00000539934 STAG3Q9UJ98 1225 aa17.06■□□□□ 0.32
DDX55-206ENST00000539934 SETD1AO15047 1707 aaKnown RBP17.06■□□□□ 0.32
DDX55-206ENST00000539934 TMEM94Q12767 1356 aa17.06■□□□□ 0.32
DDX55-206ENST00000539934 ANKRD50Q9ULJ7 1429 aa17.05■□□□□ 0.32
DDX55-206ENST00000539934 EID1Q9Y6B2 187 aa17.05■□□□□ 0.32
DDX55-206ENST00000539934 MROH1Q8NDA8 1641 aa17.03■□□□□ 0.32
DDX55-206ENST00000539934 C11orf95C9JLR9 678 aaPredicted RBP17.03■□□□□ 0.32
DDX55-206ENST00000539934 PROSER2Q86WR7 435 aaPredicted RBP17.03■□□□□ 0.32
DDX55-206ENST00000539934 SLC4A1APQ9BWU0 796 aaKnown RBP17.02■□□□□ 0.32
DDX55-206ENST00000539934 IPO4Q8TEX9 1081 aaKnown RBP17.01■□□□□ 0.31
DDX55-206ENST00000539934 KIF15Q9NS87 1388 aa17.01■□□□□ 0.31
DDX55-206ENST00000539934 PPP1R15AO75807 674 aaPredicted RBP17.01■□□□□ 0.31
DDX55-206ENST00000539934 ROBO1Q9Y6N7 1651 aa17.01■□□□□ 0.31
DDX55-206ENST00000539934 FAM135BQ49AJ0 1406 aa17.01■□□□□ 0.31
DDX55-206ENST00000539934 MAST1Q9Y2H9 1570 aa17■□□□□ 0.31
DDX55-206ENST00000539934 FOXD1Q16676 465 aa17■□□□□ 0.31
DDX55-206ENST00000539934 ARHGAP23Q9P227 1491 aa16.99■□□□□ 0.31
DDX55-206ENST00000539934 IDI1Q13907 227 aa16.98■□□□□ 0.31
DDX55-206ENST00000539934 SLIT1O75093 1534 aa16.98■□□□□ 0.31
DDX55-206ENST00000539934 PIK3C2BO00750 1634 aa16.98■□□□□ 0.31
DDX55-206ENST00000539934 TMEM2Q9UHN6 1383 aa16.98■□□□□ 0.31
DDX55-206ENST00000539934 KCNA6P17658 529 aa16.96■□□□□ 0.31
DDX55-206ENST00000539934 YTHDC1Q96MU7 727 aaKnown RBP16.96■□□□□ 0.31
DDX55-206ENST00000539934 ANKRD30BQ9BXX2 1392 aa16.95■□□□□ 0.3
DDX55-206ENST00000539934 SLAIN2Q9P270 581 aa16.94■□□□□ 0.3
DDX55-206ENST00000539934 NUP155O75694 1391 aa16.93■□□□□ 0.3
DDX55-206ENST00000539934 EIF2AK4Q9P2K8 1649 aaKnown RBP16.93■□□□□ 0.3
DDX55-206ENST00000539934 CHRM1P11229 460 aaPredicted RBP16.93■□□□□ 0.3
DDX55-206ENST00000539934 RPRD2Q5VT52 1461 aaKnown RBP16.91■□□□□ 0.3
DDX55-206ENST00000539934 TEX2Q8IWB9 1127 aa16.91■□□□□ 0.3
DDX55-206ENST00000539934 MEX3CQ5U5Q3 659 aaKnown RBP16.9■□□□□ 0.3
DDX55-206ENST00000539934 NUTM2DQ5VT03 806 aaPredicted RBP16.9■□□□□ 0.3
DDX55-206ENST00000539934 DUOX2Q9NRD8 1548 aa16.9■□□□□ 0.3
DDX55-206ENST00000539934 UPF1Q92900 1129 aaKnown RBP eCLIP16.9■□□□□ 0.3
DDX55-206ENST00000539934 PHLPP1O60346 1717 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms