RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 DHX29Q7Z478 1369 aaKnown RBP11.04□□□□□ -0.64
CCDC60-204ENST00000539847 GGT6Q6P531 493 aa11.04□□□□□ -0.64
CCDC60-204ENST00000539847 ADGBQ8N7X0 1667 aa11.04□□□□□ -0.64
CCDC60-204ENST00000539847 SUPT6HQ7KZ85 1726 aaKnown RBP11.03□□□□□ -0.64
CCDC60-204ENST00000539847 CLTCQ00610 1675 aaKnown RBP11.02□□□□□ -0.64
CCDC60-204ENST00000539847 RIOK3O14730 519 aaKnown RBP11.02□□□□□ -0.65
CCDC60-204ENST00000539847 CPS1P31327 1500 aa11.02□□□□□ -0.65
CCDC60-204ENST00000539847 PZPP20742 1482 aa11.01□□□□□ -0.65
CCDC60-204ENST00000539847 EHBP1L1Q8N3D4 1523 aa11.01□□□□□ -0.65
CCDC60-204ENST00000539847 NKX1-1Q15270 411 aaPredicted RBP11.01□□□□□ -0.65
CCDC60-204ENST00000539847 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
CCDC60-204ENST00000539847 TNRQ92752 1358 aa11.01□□□□□ -0.65
CCDC60-204ENST00000539847 DNMT1P26358 1616 aaKnown RBP11□□□□□ -0.65
CCDC60-204ENST00000539847 TOM1O60784 492 aa11□□□□□ -0.65
CCDC60-204ENST00000539847 FAM212AQ96EL1 285 aa11□□□□□ -0.65
CCDC60-204ENST00000539847 NLRP1Q9C000 1473 aa11□□□□□ -0.65
CCDC60-204ENST00000539847 KDM5DQ9BY66 1539 aa10.99□□□□□ -0.65
CCDC60-204ENST00000539847 TIAM1Q13009 1591 aa10.99□□□□□ -0.65
CCDC60-204ENST00000539847 THEMISQ8N1K5 641 aaPredicted RBP10.99□□□□□ -0.65
CCDC60-204ENST00000539847 VPS8Q8N3P4 1428 aa10.99□□□□□ -0.65
CCDC60-204ENST00000539847 CCDC141Q6ZP82 1450 aa10.99□□□□□ -0.65
CCDC60-204ENST00000539847 ANKLE2Q86XL3 938 aa10.98□□□□□ -0.65
CCDC60-204ENST00000539847 TIMELESSQ9UNS1 1208 aa10.98□□□□□ -0.65
CCDC60-204ENST00000539847 ZNF644Q9H582 1327 aaPredicted RBP10.98□□□□□ -0.65
CCDC60-204ENST00000539847 MED14O60244 1454 aa10.98□□□□□ -0.65
CCDC60-204ENST00000539847 SHANK2Q9UPX8 1470 aa10.98□□□□□ -0.65
CCDC60-204ENST00000539847 MIA2Q96PC5 1412 aa10.97□□□□□ -0.65
CCDC60-204ENST00000539847 WASHC2CQ9Y4E1 1318 aa10.96□□□□□ -0.65
CCDC60-204ENST00000539847 KIF3BO15066 747 aa10.96□□□□□ -0.65
CCDC60-204ENST00000539847 NEURL4Q96JN8 1562 aa10.95□□□□□ -0.66
CCDC60-204ENST00000539847 DEPDC5O75140 1603 aa10.95□□□□□ -0.66
CCDC60-204ENST00000539847 TULP1O00294 542 aaPredicted RBP10.94□□□□□ -0.66
CCDC60-204ENST00000539847 STK25O00506 426 aa10.94□□□□□ -0.66
CCDC60-204ENST00000539847 PITPNM1O00562 1244 aa10.94□□□□□ -0.66
CCDC60-204ENST00000539847 POLR1AO95602 1720 aaPredicted RBP10.94□□□□□ -0.66
CCDC60-204ENST00000539847 ARHGEF5Q12774 1597 aa10.94□□□□□ -0.66
CCDC60-204ENST00000539847 NPHP4O75161 1426 aaPredicted RBP10.93□□□□□ -0.66
CCDC60-204ENST00000539847 GTPBP6O43824 516 aaPredicted RBP10.93□□□□□ -0.66
CCDC60-204ENST00000539847 TSPY4P0CV99 314 aa10.93□□□□□ -0.66
CCDC60-204ENST00000539847 TSPY10P0CW01 314 aa10.93□□□□□ -0.66
CCDC60-204ENST00000539847 CHRM1P11229 460 aaPredicted RBP10.93□□□□□ -0.66
CCDC60-204ENST00000539847 HSPA1LP34931 641 aa10.93□□□□□ -0.66
CCDC60-204ENST00000539847 FBXO31Q5XUX0 539 aaPredicted RBP10.93□□□□□ -0.66
CCDC60-204ENST00000539847 UGGT1Q9NYU2 1555 aa10.93□□□□□ -0.66
CCDC60-204ENST00000539847 CAMSAP2Q08AD1 1489 aa10.93□□□□□ -0.66
CCDC60-204ENST00000539847 NCOA2Q15596 1464 aa10.93□□□□□ -0.66
CCDC60-204ENST00000539847 VWDEQ8N2E2 1590 aa10.92□□□□□ -0.66
CCDC60-204ENST00000539847 VGFO15240 615 aaPredicted RBP10.92□□□□□ -0.66
CCDC60-204ENST00000539847 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.91□□□□□ -0.66
CCDC60-204ENST00000539847 MED1Q15648 1581 aaPredicted RBP10.91□□□□□ -0.66
CCDC60-204ENST00000539847 PYGBP11216 843 aa10.91□□□□□ -0.66
CCDC60-204ENST00000539847 YTHDC1Q96MU7 727 aaKnown RBP10.91□□□□□ -0.66
CCDC60-204ENST00000539847 SUPT16HQ9Y5B9 1047 aaKnown RBP10.9□□□□□ -0.66
CCDC60-204ENST00000539847 RNF17Q9BXT8 1623 aaKnown RBP10.9□□□□□ -0.66
CCDC60-204ENST00000539847 ZC3H13Q5T200 1668 aaKnown RBP10.89□□□□□ -0.67
CCDC60-204ENST00000539847 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.88□□□□□ -0.67
CCDC60-204ENST00000539847 PIP4K2BP78356 416 aa10.88□□□□□ -0.67
CCDC60-204ENST00000539847 ZFP91Q96JP5 570 aaPredicted RBP10.88□□□□□ -0.67
CCDC60-204ENST00000539847 MAST1Q9Y2H9 1570 aa10.88□□□□□ -0.67
CCDC60-204ENST00000539847 ABCC3O15438 1527 aa10.88□□□□□ -0.67
CCDC60-204ENST00000539847 EIF2AK4Q9P2K8 1649 aaKnown RBP10.87□□□□□ -0.67
CCDC60-204ENST00000539847 SYNMO15061 1565 aa10.87□□□□□ -0.67
CCDC60-204ENST00000539847 DHX57Q6P158 1386 aaKnown RBP10.87□□□□□ -0.67
CCDC60-204ENST00000539847 ERVK-7P63135 1459 aa10.87□□□□□ -0.67
CCDC60-204ENST00000539847 IQGAP1P46940 1657 aa10.86□□□□□ -0.67
CCDC60-204ENST00000539847 ARHGAP31Q2M1Z3 1444 aa10.86□□□□□ -0.67
CCDC60-204ENST00000539847 LRRC7Q96NW7 1537 aa10.86□□□□□ -0.67
CCDC60-204ENST00000539847 ERICH6Q7L0X2 663 aa10.86□□□□□ -0.67
CCDC60-204ENST00000539847 ANP32EQ9BTT0 268 aa10.86□□□□□ -0.67
CCDC60-204ENST00000539847 BCL11BQ9C0K0 894 aaPredicted RBP10.86□□□□□ -0.67
CCDC60-204ENST00000539847 STK24Q9Y6E0 443 aa10.86□□□□□ -0.67
CCDC60-204ENST00000539847 ALKQ9UM73 1620 aa10.86□□□□□ -0.67
CCDC60-204ENST00000539847 MAP3K1Q13233 1512 aa10.85□□□□□ -0.67
CCDC60-204ENST00000539847 SGIP1Q9BQI5 828 aa10.85□□□□□ -0.67
CCDC60-204ENST00000539847 ARHGAP23Q9P227 1491 aa10.85□□□□□ -0.67
CCDC60-204ENST00000539847 CHADLQ6NUI6 762 aa10.84□□□□□ -0.67
CCDC60-204ENST00000539847 LRRC9Q6ZRR7 1453 aa10.84□□□□□ -0.67
CCDC60-204ENST00000539847 SCAF11Q99590 1463 aaKnown RBP10.84□□□□□ -0.67
CCDC60-204ENST00000539847 SLIT1O75093 1534 aa10.84□□□□□ -0.67
CCDC60-204ENST00000539847 MYOM3Q5VTT5 1437 aa10.84□□□□□ -0.67
CCDC60-204ENST00000539847 DUOX2Q9NRD8 1548 aa10.83□□□□□ -0.68
CCDC60-204ENST00000539847 RRBP1Q9P2E9 1410 aaKnown RBP10.83□□□□□ -0.68
CCDC60-204ENST00000539847 ERBINQ96RT1 1412 aa10.82□□□□□ -0.68
CCDC60-204ENST00000539847 MROH1Q8NDA8 1641 aa10.81□□□□□ -0.68
CCDC60-204ENST00000539847 EID1Q9Y6B2 187 aa10.81□□□□□ -0.68
CCDC60-204ENST00000539847 FAM135BQ49AJ0 1406 aa10.81□□□□□ -0.68
CCDC60-204ENST00000539847 PRDM15P57071 1507 aaPredicted RBP10.8□□□□□ -0.68
CCDC60-204ENST00000539847 TSPYL2Q9H2G4 693 aaPredicted RBP10.8□□□□□ -0.68
CCDC60-204ENST00000539847 UBR1Q8IWV7 1749 aa10.79□□□□□ -0.68
CCDC60-204ENST00000539847 TXNDC2Q86VQ3 553 aa10.79□□□□□ -0.68
CCDC60-204ENST00000539847 ARXQ96QS3 562 aa10.79□□□□□ -0.68
CCDC60-204ENST00000539847 KIF15Q9NS87 1388 aa10.78□□□□□ -0.68
CCDC60-204ENST00000539847 TMEM2Q9UHN6 1383 aa10.78□□□□□ -0.68
CCDC60-204ENST00000539847 LTKP29376 864 aa10.78□□□□□ -0.68
CCDC60-204ENST00000539847 TMEM132AQ24JP5 1023 aa10.78□□□□□ -0.68
CCDC60-204ENST00000539847 KDM5AP29375 1690 aaKnown RBP10.78□□□□□ -0.68
CCDC60-204ENST00000539847 STRCP1A6NGW2 1772 aa10.77□□□□□ -0.68
CCDC60-204ENST00000539847 KANK1Q14678 1352 aa10.77□□□□□ -0.69
CCDC60-204ENST00000539847 LMTK2Q8IWU2 1503 aa10.76□□□□□ -0.69
CCDC60-204ENST00000539847 KCNA6P17658 529 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms