RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 TEX14Q8IWB6 1497 aa19.25■□□□□ 0.67
USP47-207ENST00000527733 ZBED9Q6R2W3 1325 aa19.25■□□□□ 0.67
USP47-207ENST00000527733 IDI1Q13907 227 aa19.25■□□□□ 0.67
USP47-207ENST00000527733 STK31Q9BXU1 1019 aa19.25■□□□□ 0.67
USP47-207ENST00000527733 APAF1O14727 1248 aa19.25■□□□□ 0.67
USP47-207ENST00000527733 SMC4Q9NTJ3 1288 aa19.25■□□□□ 0.67
USP47-207ENST00000527733 SAMD9Q5K651 1589 aa19.24■□□□□ 0.67
USP47-207ENST00000527733 EIF5BO60841 1220 aaKnown RBP19.24■□□□□ 0.67
USP47-207ENST00000527733 OS9Q13438 667 aaPredicted RBP19.24■□□□□ 0.67
USP47-207ENST00000527733 FBXO31Q5XUX0 539 aaPredicted RBP19.24■□□□□ 0.67
USP47-207ENST00000527733 ZNF518AQ6AHZ1 1483 aa19.23■□□□□ 0.67
USP47-207ENST00000527733 SLC12A5Q9H2X9 1139 aa19.23■□□□□ 0.67
USP47-207ENST00000527733 TRAPPC8Q9Y2L5 1435 aa19.23■□□□□ 0.67
USP47-207ENST00000527733 CASC1Q6TDU7 716 aa19.23■□□□□ 0.67
USP47-207ENST00000527733 PROSER2Q86WR7 435 aaPredicted RBP19.23■□□□□ 0.67
USP47-207ENST00000527733 CCDC9Q9Y3X0 531 aaKnown RBP19.23■□□□□ 0.67
USP47-207ENST00000527733 RPRD2Q5VT52 1461 aaKnown RBP19.23■□□□□ 0.67
USP47-207ENST00000527733 KDM5BQ9UGL1 1544 aa19.22■□□□□ 0.67
USP47-207ENST00000527733 CDK19Q9BWU1 502 aa19.21■□□□□ 0.67
USP47-207ENST00000527733 DUOX2Q9NRD8 1548 aa19.21■□□□□ 0.67
USP47-207ENST00000527733 E9PSI1 815 aa19.21■□□□□ 0.67
USP47-207ENST00000527733 NPHP1O15259 732 aa19.2■□□□□ 0.66
USP47-207ENST00000527733 BRD4O60885 1362 aaPredicted RBP19.2■□□□□ 0.66
USP47-207ENST00000527733 A2MP01023 1474 aa19.19■□□□□ 0.66
USP47-207ENST00000527733 ITPRIPQ8IWB1 547 aa19.19■□□□□ 0.66
USP47-207ENST00000527733 NLRP6P59044 892 aa19.19■□□□□ 0.66
USP47-207ENST00000527733 BECN1Q14457 450 aa19.19■□□□□ 0.66
USP47-207ENST00000527733 DDRGK1Q96HY6 314 aa19.18■□□□□ 0.66
USP47-207ENST00000527733 MTHFSP49914 203 aa19.17■□□□□ 0.66
USP47-207ENST00000527733 ABCC10Q5T3U5 1492 aa19.17■□□□□ 0.66
USP47-207ENST00000527733 RUNDC1Q96C34 613 aa19.17■□□□□ 0.66
USP47-207ENST00000527733 CABP1Q9NZU7 370 aa19.17■□□□□ 0.66
USP47-207ENST00000527733 ADGRF5Q8IZF2 1346 aa19.16■□□□□ 0.66
USP47-207ENST00000527733 RTEL1-TNFRSF6BF6WH68 1400 aa19.16■□□□□ 0.66
USP47-207ENST00000527733 ZNF692Q9BU19 519 aaPredicted RBP19.16■□□□□ 0.66
USP47-207ENST00000527733 GPRASP1Q5JY77 1395 aa19.15■□□□□ 0.66
USP47-207ENST00000527733 PPP2R1AP30153 589 aa19.15■□□□□ 0.66
USP47-207ENST00000527733 CEBPAP49715 358 aaPredicted RBP19.15■□□□□ 0.66
USP47-207ENST00000527733 C1orf141Q5JVX7 400 aa19.15■□□□□ 0.66
USP47-207ENST00000527733 CLUAP1Q96AJ1 413 aa19.15■□□□□ 0.66
USP47-207ENST00000527733 ATAD2Q6PL18 1390 aa19.14■□□□□ 0.66
USP47-207ENST00000527733 ESCO1Q5FWF5 840 aa19.14■□□□□ 0.66
USP47-207ENST00000527733 RWDD1Q9H446 243 aaPredicted RBP19.14■□□□□ 0.66
USP47-207ENST00000527733 EVA1CP58658 441 aa19.14■□□□□ 0.65
USP47-207ENST00000527733 PMFBP1Q8TBY8 1022 aa19.14■□□□□ 0.65
USP47-207ENST00000527733 SHANK2Q9UPX8 1470 aa19.13■□□□□ 0.65
USP47-207ENST00000527733 RIPK4P57078 832 aa19.13■□□□□ 0.65
USP47-207ENST00000527733 TEFQ10587 303 aa19.12■□□□□ 0.65
USP47-207ENST00000527733 ZNF330Q9Y3S2 320 aaPredicted RBP19.12■□□□□ 0.65
USP47-207ENST00000527733 NUTM2GQ5VZR2 741 aa19.12■□□□□ 0.65
USP47-207ENST00000527733 ABTB2Q8N961 1025 aa19.12■□□□□ 0.65
USP47-207ENST00000527733 FAM135AQ9P2D6 1515 aa19.11■□□□□ 0.65
USP47-207ENST00000527733 AEBP2Q6ZN18 517 aaPredicted RBP19.11■□□□□ 0.65
USP47-207ENST00000527733 ELL2O00472 640 aaPredicted RBP19.1■□□□□ 0.65
USP47-207ENST00000527733 ADAMTS8Q9UP79 889 aa19.1■□□□□ 0.65
USP47-207ENST00000527733 HDAC5Q9UQL6 1122 aa19.09■□□□□ 0.65
USP47-207ENST00000527733 CCDC61Q9Y6R9 512 aa19.09■□□□□ 0.65
USP47-207ENST00000527733 HMOX1P09601 288 aa19.09■□□□□ 0.65
USP47-207ENST00000527733 NOS1P29475 1434 aa19.08■□□□□ 0.65
USP47-207ENST00000527733 SLC4A10Q6U841 1118 aa19.07■□□□□ 0.64
USP47-207ENST00000527733 C14orf93Q9H972 538 aaKnown RBP19.07■□□□□ 0.64
USP47-207ENST00000527733 WAPLQ7Z5K2 1190 aa19.06■□□□□ 0.64
USP47-207ENST00000527733 BCL2L13Q9BXK5 485 aa19.06■□□□□ 0.64
USP47-207ENST00000527733 APBB1O00213 710 aa19.05■□□□□ 0.64
USP47-207ENST00000527733 NUDT16Q96DE0 195 aaKnown RBP19.05■□□□□ 0.64
USP47-207ENST00000527733 TNRQ92752 1358 aa19.04■□□□□ 0.64
USP47-207ENST00000527733 ZKSCAN2Q63HK3 967 aa19.04■□□□□ 0.64
USP47-207ENST00000527733 RAPGEF4Q8WZA2 1011 aa19.04■□□□□ 0.64
USP47-207ENST00000527733 C11orf95C9JLR9 678 aaPredicted RBP19.03■□□□□ 0.64
USP47-207ENST00000527733 MAPKBP1O60336 1514 aa19.03■□□□□ 0.64
USP47-207ENST00000527733 HMMRO75330 724 aa19.03■□□□□ 0.64
USP47-207ENST00000527733 RRP1P56182 461 aaKnown RBP19.03■□□□□ 0.64
USP47-207ENST00000527733 DNMT1P26358 1616 aaKnown RBP19.03■□□□□ 0.64
USP47-207ENST00000527733 TCP11L2Q8N4U5 519 aa19.02■□□□□ 0.64
USP47-207ENST00000527733 GNAI1P63096 354 aa19.02■□□□□ 0.63
USP47-207ENST00000527733 SCAF11Q99590 1463 aaKnown RBP19.01■□□□□ 0.63
USP47-207ENST00000527733 NLRP2Q9NX02 1062 aa19.01■□□□□ 0.63
USP47-207ENST00000527733 CFAP44Q96MT7 982 aa19.01■□□□□ 0.63
USP47-207ENST00000527733 PLIN1O60240 522 aa19■□□□□ 0.63
USP47-207ENST00000527733 AMOTL2Q9Y2J4 779 aa19■□□□□ 0.63
USP47-207ENST00000527733 PNISRQ8TF01 805 aaKnown RBP19■□□□□ 0.63
USP47-207ENST00000527733 MAGI3Q5TCQ9 1506 aa18.99■□□□□ 0.63
USP47-207ENST00000527733 ABCA8O94911 1581 aa18.99■□□□□ 0.63
USP47-207ENST00000527733 UHRF1BP1LA0JNW5 1464 aa18.99■□□□□ 0.63
USP47-207ENST00000527733 ADGRL2O95490 1459 aa18.99■□□□□ 0.63
USP47-207ENST00000527733 TTC5Q8N0Z6 440 aa18.99■□□□□ 0.63
USP47-207ENST00000527733 TCERG1O14776 1098 aaKnown RBP18.98■□□□□ 0.63
USP47-207ENST00000527733 KCNJ4P48050 445 aa18.98■□□□□ 0.63
USP47-207ENST00000527733 ANP32BQ92688 251 aaKnown RBP18.98■□□□□ 0.63
USP47-207ENST00000527733 NSD3Q9BZ95 1437 aa18.98■□□□□ 0.63
USP47-207ENST00000527733 PRKAR2BP31323 418 aa18.97■□□□□ 0.63
USP47-207ENST00000527733 NBR1Q14596 966 aa18.97■□□□□ 0.63
USP47-207ENST00000527733 WASLO00401 505 aaPredicted RBP18.95■□□□□ 0.62
USP47-207ENST00000527733 TSPYL4Q9UJ04 414 aa18.94■□□□□ 0.62
USP47-207ENST00000527733 GAS2L2Q8NHY3 880 aa18.94■□□□□ 0.62
USP47-207ENST00000527733 COG6Q9Y2V7 657 aa18.94■□□□□ 0.62
USP47-207ENST00000527733 EIF2S2P20042 333 aaKnown RBP18.93■□□□□ 0.62
USP47-207ENST00000527733 API5Q9BZZ5 524 aaKnown RBP18.93■□□□□ 0.62
USP47-207ENST00000527733 EXOC6Q8TAG9 804 aa18.93■□□□□ 0.62
USP47-207ENST00000527733 ATP7AQ04656 1500 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms