RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 BECN1Q14457 450 aa9.56□□□□□ -0.88
SOX6-208ENST00000527619 FAM43BQ6ZT52 329 aaPredicted RBP9.56□□□□□ -0.88
SOX6-208ENST00000527619 LRRIQ1Q96JM4 1722 aa9.56□□□□□ -0.88
SOX6-208ENST00000527619 TPM2P07951 284 aa9.56□□□□□ -0.88
SOX6-208ENST00000527619 CDCA7LQ96GN5 454 aa9.56□□□□□ -0.88
SOX6-208ENST00000527619 CHIC2Q9UKJ5 165 aa9.56□□□□□ -0.88
SOX6-208ENST00000527619 UGGT2Q9NYU1 1516 aa9.56□□□□□ -0.88
SOX6-208ENST00000527619 HMGB1P09429 215 aaKnown RBP9.55□□□□□ -0.88
SOX6-208ENST00000527619 KIF14Q15058 1648 aa9.55□□□□□ -0.88
SOX6-208ENST00000527619 CUL7Q14999 1698 aa9.55□□□□□ -0.88
SOX6-208ENST00000527619 VGLL3A8MV65 326 aa9.55□□□□□ -0.88
SOX6-208ENST00000527619 PUS7Q96PZ0 661 aaKnown RBP9.55□□□□□ -0.88
SOX6-208ENST00000527619 FAM193AP78312 1265 aa9.54□□□□□ -0.88
SOX6-208ENST00000527619 IRX3P78415 501 aaPredicted RBP9.54□□□□□ -0.88
SOX6-208ENST00000527619 MBD5Q9P267 1494 aa9.54□□□□□ -0.88
SOX6-208ENST00000527619 ARHGEF11O15085 1522 aa9.54□□□□□ -0.88
SOX6-208ENST00000527619 PANK2Q9BZ23 570 aa9.54□□□□□ -0.88
SOX6-208ENST00000527619 E9PCH4 1651 aa9.53□□□□□ -0.88
SOX6-208ENST00000527619 ZBTB7CA1YPR0 619 aa9.53□□□□□ -0.88
SOX6-208ENST00000527619 PTMAP06454 111 aaKnown RBP9.53□□□□□ -0.88
SOX6-208ENST00000527619 C20orf194Q5TEA3 1177 aa9.53□□□□□ -0.88
SOX6-208ENST00000527619 FOXD4L5Q5VV16 416 aaPredicted RBP9.53□□□□□ -0.88
SOX6-208ENST00000527619 FOXD4L4Q8WXT5 416 aaPredicted RBP9.53□□□□□ -0.88
SOX6-208ENST00000527619 CTTNBP2Q8WZ74 1663 aa9.53□□□□□ -0.88
SOX6-208ENST00000527619 CLGNO14967 610 aa9.53□□□□□ -0.88
SOX6-208ENST00000527619 SMAP1Q8IYB5 467 aaPredicted RBP9.53□□□□□ -0.88
SOX6-208ENST00000527619 USP19O94966 1318 aa9.53□□□□□ -0.88
SOX6-208ENST00000527619 PLEKHH2Q8IVE3 1493 aa9.53□□□□□ -0.88
SOX6-208ENST00000527619 INSRP06213 1382 aa9.52□□□□□ -0.88
SOX6-208ENST00000527619 ZMYM4Q5VZL5 1548 aa9.52□□□□□ -0.88
SOX6-208ENST00000527619 PATL2C9JE40 543 aaKnown RBP9.52□□□□□ -0.88
SOX6-208ENST00000527619 GRIPAP1Q4V328 841 aa9.52□□□□□ -0.88
SOX6-208ENST00000527619 SLKQ9H2G2 1235 aaPredicted RBP9.52□□□□□ -0.88
SOX6-208ENST00000527619 ESPNB1AK53 854 aa9.52□□□□□ -0.89
SOX6-208ENST00000527619 NLRP13Q86W25 1043 aa9.52□□□□□ -0.89
SOX6-208ENST00000527619 PIAS4Q8N2W9 510 aaPredicted RBP9.52□□□□□ -0.89
SOX6-208ENST00000527619 ANTXR1Q9H6X2 564 aa9.52□□□□□ -0.89
SOX6-208ENST00000527619 BLMP54132 1417 aaPredicted RBP9.51□□□□□ -0.89
SOX6-208ENST00000527619 NUP160Q12769 1436 aa9.51□□□□□ -0.89
SOX6-208ENST00000527619 CLSTN1O94985 981 aa9.51□□□□□ -0.89
SOX6-208ENST00000527619 MRE11P49959 708 aa9.51□□□□□ -0.89
SOX6-208ENST00000527619 ZNF526Q8TF50 670 aaPredicted RBP9.51□□□□□ -0.89
SOX6-208ENST00000527619 ZHX1Q9UKY1 873 aaPredicted RBP9.5□□□□□ -0.89
SOX6-208ENST00000527619 CEP170Q5SW79 1584 aa9.5□□□□□ -0.89
SOX6-208ENST00000527619 JPH4Q96JJ6 628 aa9.49□□□□□ -0.89
SOX6-208ENST00000527619 PLCD4Q9BRC7 762 aa9.49□□□□□ -0.89
SOX6-208ENST00000527619 MYH16Q9H6N6 1097 aa9.49□□□□□ -0.89
SOX6-208ENST00000527619 PARD3Q8TEW0 1356 aa9.49□□□□□ -0.89
SOX6-208ENST00000527619 CLASP1Q7Z460 1538 aa9.49□□□□□ -0.89
SOX6-208ENST00000527619 ANP32BQ92688 251 aaKnown RBP9.49□□□□□ -0.89
SOX6-208ENST00000527619 MTMR7Q9Y216 660 aa9.49□□□□□ -0.89
SOX6-208ENST00000527619 RAD21O60216 631 aa9.48□□□□□ -0.89
SOX6-208ENST00000527619 MCM4P33991 863 aa9.48□□□□□ -0.89
SOX6-208ENST00000527619 ERBB4Q15303 1308 aa9.48□□□□□ -0.89
SOX6-208ENST00000527619 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.48□□□□□ -0.89
SOX6-208ENST00000527619 NLRP1Q9C000 1473 aa9.48□□□□□ -0.89
SOX6-208ENST00000527619 PRDM16Q9HAZ2 1276 aa9.48□□□□□ -0.89
SOX6-208ENST00000527619 CWC22Q9HCG8 908 aaKnown RBP9.48□□□□□ -0.89
SOX6-208ENST00000527619 ISY1Q9ULR0 285 aaKnown RBP9.48□□□□□ -0.89
SOX6-208ENST00000527619 HDAC5Q9UQL6 1122 aa9.48□□□□□ -0.89
SOX6-208ENST00000527619 MMP14P50281 582 aa9.48□□□□□ -0.89
SOX6-208ENST00000527619 CERS3Q8IU89 383 aa9.48□□□□□ -0.89
SOX6-208ENST00000527619 GZF1Q9H116 711 aaPredicted RBP9.48□□□□□ -0.89
SOX6-208ENST00000527619 RALGAPBQ86X10 1494 aa9.47□□□□□ -0.89
SOX6-208ENST00000527619 UTP14CQ5TAP6 766 aaKnown RBP9.47□□□□□ -0.89
SOX6-208ENST00000527619 KCTD17Q8N5Z5 321 aa9.47□□□□□ -0.89
SOX6-208ENST00000527619 GRPEL1Q9HAV7 217 aa9.47□□□□□ -0.89
SOX6-208ENST00000527619 KIAA0586Q9BVV6 1533 aa9.47□□□□□ -0.89
SOX6-208ENST00000527619 RBM25P49756 843 aaKnown RBP9.47□□□□□ -0.89
SOX6-208ENST00000527619 PPP4R3BQ5MIZ7 849 aa9.47□□□□□ -0.89
SOX6-208ENST00000527619 TRIM44Q96DX7 344 aaPredicted RBP9.47□□□□□ -0.89
SOX6-208ENST00000527619 ZNF692Q9BU19 519 aaPredicted RBP9.47□□□□□ -0.89
SOX6-208ENST00000527619 SAMD9Q5K651 1589 aa9.46□□□□□ -0.89
SOX6-208ENST00000527619 ROCK1Q13464 1354 aa9.46□□□□□ -0.89
SOX6-208ENST00000527619 ZNF622Q969S3 477 aaKnown RBP eCLIP9.46□□□□□ -0.894e-6■■■■■ 36.2
SOX6-208ENST00000527619 MAGI3Q5TCQ9 1506 aa9.46□□□□□ -0.89
SOX6-208ENST00000527619 APPP05067 770 aa9.46□□□□□ -0.9
SOX6-208ENST00000527619 IFNLR1Q8IU57 520 aaPredicted RBP9.46□□□□□ -0.9
SOX6-208ENST00000527619 TRAK2O60296 914 aa9.45□□□□□ -0.9
SOX6-208ENST00000527619 MCCP23508 829 aa9.45□□□□□ -0.9
SOX6-208ENST00000527619 UHRF1BP1Q6BDS2 1440 aa9.45□□□□□ -0.9
SOX6-208ENST00000527619 EIF3AQ14152 1382 aaKnown RBP9.45□□□□□ -0.9
SOX6-208ENST00000527619 SEC24BO95487 1268 aa9.45□□□□□ -0.9
SOX6-208ENST00000527619 MAPK8IP2Q13387 824 aaPredicted RBP9.45□□□□□ -0.9
SOX6-208ENST00000527619 KIAA1211Q6ZU35 1233 aa9.45□□□□□ -0.9
SOX6-208ENST00000527619 PSMD1Q99460 953 aa9.45□□□□□ -0.9
SOX6-208ENST00000527619 PTMSP20962 102 aa9.44□□□□□ -0.9
SOX6-208ENST00000527619 CYB5RLQ6IPT4 315 aa9.44□□□□□ -0.9
SOX6-208ENST00000527619 MAPK8IP3Q9UPT6 1336 aa9.44□□□□□ -0.9
SOX6-208ENST00000527619 TNNT2P45379 298 aaPredicted RBP9.44□□□□□ -0.9
SOX6-208ENST00000527619 MAP7D2Q96T17 732 aa9.44□□□□□ -0.9
SOX6-208ENST00000527619 TBC1D2Q9BYX2 928 aa9.44□□□□□ -0.9
SOX6-208ENST00000527619 PRG4Q92954 1404 aaPredicted RBP9.43□□□□□ -0.9
SOX6-208ENST00000527619 CARD11Q9BXL7 1154 aa9.43□□□□□ -0.9
SOX6-208ENST00000527619 AXDND1Q5T1B0 1012 aaPredicted RBP9.43□□□□□ -0.9
SOX6-208ENST00000527619 UPF2Q9HAU5 1272 aaKnown RBP9.43□□□□□ -0.9
SOX6-208ENST00000527619 SLC52A1Q9NWF4 448 aa9.43□□□□□ -0.9
SOX6-208ENST00000527619 PZPP20742 1482 aa9.43□□□□□ -0.9
SOX6-208ENST00000527619 RIMBP3CA6NJZ7 1639 aa9.42□□□□□ -0.9
SOX6-208ENST00000527619 RIMBP3BA6NNM3 1639 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms