RNA–Protein interactions for RNA: ENST00000516309.1

RNU6ATAC39P-201, Transcript of RNA, U6atac small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6ATAC39P, Length 149 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC39P-201ENST00000516309 PPP1R12CQ9BZL4 782 aa9.72□□□□□ -0.85
RNU6ATAC39P-201ENST00000516309 DIXDC1Q155Q3 683 aa9.71□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 CCER1Q8TC90 406 aaPredicted RBP9.71□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 SIRT1Q96EB6 747 aa9.71□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 FAM217BQ9NTX9 383 aaPredicted RBP9.71□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 TMEM88BA6NKF7 163 aa9.7□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 KDM4AO75164 1064 aa9.69□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 ATG7O95352 703 aa9.69□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 ZNF16P17020 682 aaPredicted RBP9.69□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 NEFLP07196 543 aa9.68□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 DCBLD2Q96PD2 775 aa9.68□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 BCL2L13Q9BXK5 485 aa9.68□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 BRPF3Q9ULD4 1205 aa9.68□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 LMOD1P29536 600 aaPredicted RBP9.67□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 PTGER2P43116 358 aa9.67□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 FOXK1P85037 733 aa9.67□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 WASHC4Q2M389 1173 aa9.67□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 ADAMTS19Q8TE59 1207 aa9.67□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 UBXN4Q92575 508 aa9.67□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 DDX12PQ92771 950 aa9.67□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 TBC1D2Q9BYX2 928 aa9.67□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 TMC2Q8TDI7 906 aa9.66□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 ANKRD62A6NC57 917 aa9.65□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 PALM3A6NDB9 673 aaPredicted RBP9.65□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 ZC3H6P61129 1189 aaKnown RBP9.65□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 FBXO31Q5XUX0 539 aaPredicted RBP9.65□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 DNAJC14Q6Y2X3 702 aaPredicted RBP9.65□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 NOL8Q76FK4 1167 aaKnown RBP9.65□□□□□ -0.86
RNU6ATAC39P-201ENST00000516309 PHOX2BQ99453 314 aa9.64□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 PPP1R1BQ9UD71 204 aaPredicted RBP9.64□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 MAP3K13O43283 966 aa9.63□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 SF3A1Q15459 793 aaKnown RBP9.63□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 GIPC2Q8TF65 315 aa9.63□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 LIMD1Q9UGP4 676 aa9.63□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 ZC3H4Q9UPT8 1303 aaKnown RBP9.62□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 CD44P16070 742 aaKnown RBP9.62□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 CDCA8Q53HL2 280 aa9.62□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 PLPP6Q8IY26 295 aa9.62□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 NDUFB9Q9Y6M9 179 aa9.62□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 RIC3Q7Z5B4 369 aa9.61□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 HIRIP3Q9BW71 556 aaPredicted RBP9.61□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 AP1G2O75843 785 aa9.6□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 PRIM1P49642 420 aaKnown RBP9.6□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 PLEKHD1A6NEE1 506 aa9.59□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 ZNF326Q5BKZ1 582 aaKnown RBP9.59□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 ZNF710Q8N1W2 664 aa9.59□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 ZNF526Q8TF50 670 aaPredicted RBP9.59□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 TFIP11Q9UBB9 837 aaKnown RBP9.59□□□□□ -0.87
RNU6ATAC39P-201ENST00000516309 TUSC1Q2TAM9 212 aa9.58□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 TMED8Q6PL24 325 aaPredicted RBP9.58□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 MARCH6O60337 910 aa9.57□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 PAK3O75914 559 aaPredicted RBP9.57□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 KIF12Q96FN5 646 aa9.57□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 USP17L8P0C7I0 530 aa9.56□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 VAMP1P23763 118 aa9.56□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 CLCN6P51797 869 aa9.56□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 NAALADL2Q58DX5 795 aa9.56□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 FARP1Q9Y4F1 1045 aaPredicted RBP9.56□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 ARID4AP29374 1257 aaPredicted RBP9.55□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 UPF1Q92900 1129 aaKnown RBP eCLIP9.55□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 ALG2Q9H553 416 aa9.55□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 PRDM16Q9HAZ2 1276 aa9.55□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 LOC102724159A0A0B4J2E5 919 aa9.54□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 OATP04181 439 aa9.54□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 MARSP56192 900 aaKnown RBP9.54□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 VAC14Q08AM6 782 aa9.54□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 PWP2Q15269 919 aaKnown RBP9.54□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 POTEJP0CG39 1038 aa9.53□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 METTL3Q86U44 580 aaKnown RBP9.53□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 NLRP7Q8WX94 980 aa9.53□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 RIPOR2Q9Y4F9 1068 aa9.53□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 MAFBQ9Y5Q3 323 aaPredicted RBP9.53□□□□□ -0.88
RNU6ATAC39P-201ENST00000516309 SPTLC1O15269 473 aa9.52□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 CSPP1Q1MSJ5 1256 aa9.52□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 BCL11AQ9H165 835 aa9.52□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 CDHR5Q9HBB8 845 aa9.52□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 NPDC1Q9NQX5 325 aaPredicted RBP9.52□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 SOX11P35716 441 aa9.51□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 NOM1Q5C9Z4 860 aaKnown RBP9.51□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 UCN2Q96RP3 112 aa9.51□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 MYH16Q9H6N6 1097 aa9.51□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 SOWAHDA6NJG2 315 aa9.5□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 ELOAQ14241 798 aaKnown RBP9.5□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 SPIRE2Q8WWL2 714 aa9.5□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 L3MBTL3Q96JM7 780 aaPredicted RBP9.5□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 GJD4Q96KN9 370 aaPredicted RBP9.5□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 TMEM106CQ9BVX2 250 aa9.5□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 RSBN1LQ6PCB5 846 aaPredicted RBP9.49□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 FAM163AQ96GL9 167 aaPredicted RBP9.49□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 ANKRD33BA6NCL7 494 aa9.48□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 NUTM2BA6NNL0 878 aaPredicted RBP9.48□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 NUTM2EB1AL46 878 aaPredicted RBP9.48□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 LILRB3O75022 631 aa9.48□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 TMEM164Q5U3C3 297 aa9.48□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 NUTM2DQ5VT03 806 aaPredicted RBP9.48□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 NPAS4Q8IUM7 802 aa9.48□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 NUTM2AQ8IVF1 878 aaPredicted RBP9.48□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 BIN2Q9UBW5 565 aaPredicted RBP9.48□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 GALR2O43603 387 aaPredicted RBP9.47□□□□□ -0.89
RNU6ATAC39P-201ENST00000516309 EVI5O60447 810 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms