RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 MAGI2Q86UL8 1455 aa19.8■□□□□ 0.76
HERC6-206ENST00000506714 CD109Q6YHK3 1445 aa19.78■□□□□ 0.76
HERC6-206ENST00000506714 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.78■□□□□ 0.76
HERC6-206ENST00000506714 ZFYVE16Q7Z3T8 1539 aa19.77■□□□□ 0.76
HERC6-206ENST00000506714 DDRGK1Q96HY6 314 aa19.77■□□□□ 0.76
HERC6-206ENST00000506714 PPM1GO15355 546 aaPredicted RBP19.77■□□□□ 0.75
HERC6-206ENST00000506714 CRBNQ96SW2 442 aa19.77■□□□□ 0.75
HERC6-206ENST00000506714 PLPPR3Q6T4P5 718 aa19.76■□□□□ 0.75
HERC6-206ENST00000506714 SPAG9O60271 1321 aaKnown RBP19.75■□□□□ 0.75
HERC6-206ENST00000506714 SCAPERQ9BY12 1400 aa19.75■□□□□ 0.75
HERC6-206ENST00000506714 PLIN1O60240 522 aa19.75■□□□□ 0.75
HERC6-206ENST00000506714 AFAP1Q8N556 730 aa19.74■□□□□ 0.75
HERC6-206ENST00000506714 IQGAP1P46940 1657 aa19.74■□□□□ 0.75
HERC6-206ENST00000506714 INO80Q9ULG1 1556 aaPredicted RBP19.74■□□□□ 0.75
HERC6-206ENST00000506714 RTEL1-TNFRSF6BF6WH68 1400 aa19.73■□□□□ 0.75
HERC6-206ENST00000506714 ATP7AQ04656 1500 aa19.73■□□□□ 0.75
HERC6-206ENST00000506714 CDCA8Q53HL2 280 aa19.72■□□□□ 0.75
HERC6-206ENST00000506714 STAC3Q96MF2 364 aa19.72■□□□□ 0.75
HERC6-206ENST00000506714 ADAMTS8Q9UP79 889 aa19.72■□□□□ 0.75
HERC6-206ENST00000506714 KNSTRNQ9Y448 316 aa19.72■□□□□ 0.75
HERC6-206ENST00000506714 SYNMO15061 1565 aa19.71■□□□□ 0.75
HERC6-206ENST00000506714 MADDQ8WXG6 1647 aa19.7■□□□□ 0.74
HERC6-206ENST00000506714 WDR43Q15061 677 aaKnown RBP eCLIP19.7■□□□□ 0.74
HERC6-206ENST00000506714 NEFMP07197 916 aa19.69■□□□□ 0.74
HERC6-206ENST00000506714 CENPQQ7L2Z9 268 aaPredicted RBP19.69■□□□□ 0.74
HERC6-206ENST00000506714 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.69■□□□□ 0.74
HERC6-206ENST00000506714 MAP3K4Q9Y6R4 1608 aa19.69■□□□□ 0.74
HERC6-206ENST00000506714 KDM2BQ8NHM5 1336 aa19.69■□□□□ 0.74
HERC6-206ENST00000506714 PPP2R1AP30153 589 aa19.69■□□□□ 0.74
HERC6-206ENST00000506714 SPHKAPQ2M3C7 1700 aa19.68■□□□□ 0.74
HERC6-206ENST00000506714 ZNF518AQ6AHZ1 1483 aa19.68■□□□□ 0.74
HERC6-206ENST00000506714 CEP152O94986 1710 aa19.67■□□□□ 0.74
HERC6-206ENST00000506714 DUSP27Q5VZP5 1158 aa19.67■□□□□ 0.74
HERC6-206ENST00000506714 PIK3C2GO75747 1445 aa19.66■□□□□ 0.74
HERC6-206ENST00000506714 GOLGA2Q08379 1002 aa19.66■□□□□ 0.74
HERC6-206ENST00000506714 GLI2P10070 1586 aa19.66■□□□□ 0.74
HERC6-206ENST00000506714 ZNF521Q96K83 1311 aa19.66■□□□□ 0.74
HERC6-206ENST00000506714 ASXL1Q8IXJ9 1541 aa19.66■□□□□ 0.74
HERC6-206ENST00000506714 LAS1LQ9Y4W2 734 aaKnown RBP19.65■□□□□ 0.74
HERC6-206ENST00000506714 NPC1L1Q9UHC9 1359 aa19.65■□□□□ 0.74
HERC6-206ENST00000506714 AMER1Q5JTC6 1135 aaPredicted RBP19.65■□□□□ 0.74
HERC6-206ENST00000506714 KIDINS220Q9ULH0 1771 aa19.65■□□□□ 0.74
HERC6-206ENST00000506714 NEO1Q92859 1461 aa19.64■□□□□ 0.74
HERC6-206ENST00000506714 SCAF11Q99590 1463 aaKnown RBP19.64■□□□□ 0.73
HERC6-206ENST00000506714 PLEKHH1Q9ULM0 1364 aa19.64■□□□□ 0.73
HERC6-206ENST00000506714 POGZQ7Z3K3 1410 aa19.64■□□□□ 0.73
HERC6-206ENST00000506714 DIP2BQ9P265 1576 aa19.64■□□□□ 0.73
HERC6-206ENST00000506714 TRPM2O94759 1503 aa19.63■□□□□ 0.73
HERC6-206ENST00000506714 C20orf194Q5TEA3 1177 aa19.63■□□□□ 0.73
HERC6-206ENST00000506714 KIAA1210Q9ULL0 1709 aa19.62■□□□□ 0.73
HERC6-206ENST00000506714 EIF3AQ14152 1382 aaKnown RBP19.61■□□□□ 0.73
HERC6-206ENST00000506714 MYOM1P52179 1685 aa19.61■□□□□ 0.73
HERC6-206ENST00000506714 HECW2Q9P2P5 1572 aa19.6■□□□□ 0.73
HERC6-206ENST00000506714 FAM161AQ3B820 660 aa19.6■□□□□ 0.73
HERC6-206ENST00000506714 DEPDC5O75140 1603 aa19.59■□□□□ 0.73
HERC6-206ENST00000506714 KDM5AP29375 1690 aaKnown RBP19.59■□□□□ 0.73
HERC6-206ENST00000506714 SLFN5Q08AF3 891 aa19.59■□□□□ 0.73
HERC6-206ENST00000506714 NGEFQ8N5V2 710 aa19.58■□□□□ 0.73
HERC6-206ENST00000506714 DAXXQ9UER7 740 aaPredicted RBP19.58■□□□□ 0.73
HERC6-206ENST00000506714 TSPOAP1O95153 1857 aa19.58■□□□□ 0.73
HERC6-206ENST00000506714 TRMT2AQ8IZ69 625 aaKnown RBP19.58■□□□□ 0.72
HERC6-206ENST00000506714 PTPRTO14522 1441 aa19.57■□□□□ 0.72
HERC6-206ENST00000506714 FAM69CQ0P6D2 419 aa19.57■□□□□ 0.72
HERC6-206ENST00000506714 NEURL4Q96JN8 1562 aa19.56■□□□□ 0.72
HERC6-206ENST00000506714 RICTORQ6R327 1708 aa19.55■□□□□ 0.72
HERC6-206ENST00000506714 TET3O43151 1660 aa19.55■□□□□ 0.72
HERC6-206ENST00000506714 CLTCL1P53675 1640 aa19.55■□□□□ 0.72
HERC6-206ENST00000506714 SKAP1Q86WV1 359 aa19.55■□□□□ 0.72
HERC6-206ENST00000506714 NKTRP30414 1462 aaKnown RBP19.55■□□□□ 0.72
HERC6-206ENST00000506714 MLH3Q9UHC1 1453 aa19.55■□□□□ 0.72
HERC6-206ENST00000506714 C8orf34Q49A92 452 aa19.53■□□□□ 0.72
HERC6-206ENST00000506714 VIRMAQ69YN4 1812 aaKnown RBP19.52■□□□□ 0.72
HERC6-206ENST00000506714 ABCA6Q8N139 1617 aa19.52■□□□□ 0.72
HERC6-206ENST00000506714 RTN4Q9NQC3 1192 aaKnown RBP19.51■□□□□ 0.71
HERC6-206ENST00000506714 E9PSI1 815 aa19.51■□□□□ 0.71
HERC6-206ENST00000506714 KIF3BO15066 747 aa19.51■□□□□ 0.71
HERC6-206ENST00000506714 RAPGEF3O95398 923 aa19.51■□□□□ 0.71
HERC6-206ENST00000506714 PPRC1Q5VV67 1664 aaKnown RBP19.51■□□□□ 0.71
HERC6-206ENST00000506714 KANK1Q14678 1352 aa19.5■□□□□ 0.71
HERC6-206ENST00000506714 KIF13AQ9H1H9 1805 aa19.5■□□□□ 0.71
HERC6-206ENST00000506714 NFKBIBQ15653 356 aa19.49■□□□□ 0.71
HERC6-206ENST00000506714 MROH1Q8NDA8 1641 aa19.49■□□□□ 0.71
HERC6-206ENST00000506714 NINLQ9Y2I6 1382 aa19.48■□□□□ 0.71
HERC6-206ENST00000506714 GSE1Q14687 1217 aa19.48■□□□□ 0.71
HERC6-206ENST00000506714 VWDEQ8N2E2 1590 aa19.48■□□□□ 0.71
HERC6-206ENST00000506714 FRMPD1Q5SYB0 1578 aa19.47■□□□□ 0.71
HERC6-206ENST00000506714 APAF1O14727 1248 aa19.47■□□□□ 0.71
HERC6-206ENST00000506714 CCDC146Q8IYE0 955 aa19.46■□□□□ 0.71
HERC6-206ENST00000506714 DIP2CQ9Y2E4 1556 aa19.45■□□□□ 0.7
HERC6-206ENST00000506714 MYOM2P54296 1465 aa19.45■□□□□ 0.7
HERC6-206ENST00000506714 KIF1BO60333 1816 aa19.45■□□□□ 0.7
HERC6-206ENST00000506714 PDE3AQ14432 1141 aa19.45■□□□□ 0.7
HERC6-206ENST00000506714 CGNL1Q0VF96 1302 aa19.45■□□□□ 0.7
HERC6-206ENST00000506714 ERVK-7P63135 1459 aa19.43■□□□□ 0.7
HERC6-206ENST00000506714 RGS3P49796 1198 aa19.43■□□□□ 0.7
HERC6-206ENST00000506714 IL27Q8NEV9 243 aa19.42■□□□□ 0.7
HERC6-206ENST00000506714 SPINK5Q9NQ38 1064 aaPredicted RBP19.42■□□□□ 0.7
HERC6-206ENST00000506714 MYO3AQ8NEV4 1616 aa19.42■□□□□ 0.7
HERC6-206ENST00000506714 POLR3AO14802 1390 aaPredicted RBP19.42■□□□□ 0.7
HERC6-206ENST00000506714 SLC4A3P48751 1232 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms