RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 SSUH2Q9Y2M2 353 aa10.8□□□□□ -0.68
GYPB-206ENST00000506516 UNC13BO14795 1591 aa10.8□□□□□ -0.68
GYPB-206ENST00000506516 CEP170BQ9Y4F5 1589 aaPredicted RBP10.79□□□□□ -0.68
GYPB-206ENST00000506516 SETD5Q9C0A6 1442 aa10.79□□□□□ -0.68
GYPB-206ENST00000506516 MYO3AQ8NEV4 1616 aa10.79□□□□□ -0.68
GYPB-206ENST00000506516 NCKAP5LQ9HCH0 1330 aa10.79□□□□□ -0.68
GYPB-206ENST00000506516 EFCAB6Q5THR3 1501 aa10.79□□□□□ -0.68
GYPB-206ENST00000506516 UGGT1Q9NYU2 1555 aa10.78□□□□□ -0.68
GYPB-206ENST00000506516 RTN4Q9NQC3 1192 aaKnown RBP10.78□□□□□ -0.68
GYPB-206ENST00000506516 NOS1P29475 1434 aa10.77□□□□□ -0.68
GYPB-206ENST00000506516 GCC2Q8IWJ2 1684 aa10.77□□□□□ -0.69
GYPB-206ENST00000506516 HDGFP51858 240 aaKnown RBP10.77□□□□□ -0.69
GYPB-206ENST00000506516 EID1Q9Y6B2 187 aa10.77□□□□□ -0.69
GYPB-206ENST00000506516 IQGAP3Q86VI3 1631 aa10.76□□□□□ -0.69
GYPB-206ENST00000506516 TET3O43151 1660 aa10.76□□□□□ -0.69
GYPB-206ENST00000506516 PLA2R1Q13018 1463 aa10.76□□□□□ -0.69
GYPB-206ENST00000506516 CHGAP10645 457 aaKnown RBP10.76□□□□□ -0.69
GYPB-206ENST00000506516 HRCP23327 699 aa10.76□□□□□ -0.69
GYPB-206ENST00000506516 CHRDL2Q6WN34 429 aa10.76□□□□□ -0.69
GYPB-206ENST00000506516 REM2Q8IYK8 340 aaPredicted RBP10.76□□□□□ -0.69
GYPB-206ENST00000506516 MPHOSPH9Q99550 1183 aa10.76□□□□□ -0.69
GYPB-206ENST00000506516 PTPRTO14522 1441 aa10.75□□□□□ -0.69
GYPB-206ENST00000506516 TXNDC2Q86VQ3 553 aa10.75□□□□□ -0.69
GYPB-206ENST00000506516 ZNF142P52746 1687 aaPredicted RBP10.75□□□□□ -0.69
GYPB-206ENST00000506516 RAB3GAP2Q9H2M9 1393 aa10.74□□□□□ -0.69
GYPB-206ENST00000506516 CFAP65Q6ZU64 1925 aaKnown RBP10.74□□□□□ -0.69
GYPB-206ENST00000506516 VASPP50552 380 aaPredicted RBP10.73□□□□□ -0.69
GYPB-206ENST00000506516 TMEM2Q9UHN6 1383 aa10.72□□□□□ -0.69
GYPB-206ENST00000506516 E9PCH4 1651 aa10.71□□□□□ -0.69
GYPB-206ENST00000506516 SYNMO15061 1565 aa10.71□□□□□ -0.69
GYPB-206ENST00000506516 TRIM26Q12899 539 aaPredicted RBP10.71□□□□□ -0.69
GYPB-206ENST00000506516 STRCQ7RTU9 1775 aa10.71□□□□□ -0.69
GYPB-206ENST00000506516 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.71□□□□□ -0.69
GYPB-206ENST00000506516 LTKP29376 864 aa10.7□□□□□ -0.7
GYPB-206ENST00000506516 ZNF326Q5BKZ1 582 aaKnown RBP10.7□□□□□ -0.7
GYPB-206ENST00000506516 BCANQ96GW7 911 aa10.7□□□□□ -0.7
GYPB-206ENST00000506516 PIK3C2BO00750 1634 aa10.69□□□□□ -0.7
GYPB-206ENST00000506516 PPP1R15AO75807 674 aaPredicted RBP10.69□□□□□ -0.7
GYPB-206ENST00000506516 UBR1Q8IWV7 1749 aa10.69□□□□□ -0.7
GYPB-206ENST00000506516 SLIT1O75093 1534 aa10.68□□□□□ -0.7
GYPB-206ENST00000506516 SCAF11Q99590 1463 aaKnown RBP10.68□□□□□ -0.7
GYPB-206ENST00000506516 NPHP4O75161 1426 aaPredicted RBP10.68□□□□□ -0.7
GYPB-206ENST00000506516 ADGRB3O60242 1522 aa10.68□□□□□ -0.7
GYPB-206ENST00000506516 MED14O60244 1454 aa10.68□□□□□ -0.7
GYPB-206ENST00000506516 ARHGAP23Q9P227 1491 aa10.68□□□□□ -0.7
GYPB-206ENST00000506516 KDM5AP29375 1690 aaKnown RBP10.67□□□□□ -0.7
GYPB-206ENST00000506516 CERKQ8TCT0 537 aa10.66□□□□□ -0.7
GYPB-206ENST00000506516 RIMS2Q9UQ26 1411 aa10.66□□□□□ -0.7
GYPB-206ENST00000506516 ZNF335Q9H4Z2 1342 aaPredicted RBP10.65□□□□□ -0.7
GYPB-206ENST00000506516 TRPM2O94759 1503 aa10.65□□□□□ -0.7
GYPB-206ENST00000506516 CCDC144AA2RUR9 1427 aa10.65□□□□□ -0.7
GYPB-206ENST00000506516 SPHKAPQ2M3C7 1700 aa10.64□□□□□ -0.71
GYPB-206ENST00000506516 RPGRIP1LQ68CZ1 1315 aa10.64□□□□□ -0.71
GYPB-206ENST00000506516 PITPNM1O00562 1244 aa10.64□□□□□ -0.71
GYPB-206ENST00000506516 VGFO15240 615 aaPredicted RBP10.64□□□□□ -0.71
GYPB-206ENST00000506516 NUTM2DQ5VT03 806 aaPredicted RBP10.64□□□□□ -0.71
GYPB-206ENST00000506516 SLC26A8Q96RN1 970 aa10.64□□□□□ -0.71
GYPB-206ENST00000506516 TMEM131LA2VDJ0 1609 aa10.64□□□□□ -0.71
GYPB-206ENST00000506516 NEURL4Q96JN8 1562 aa10.63□□□□□ -0.71
GYPB-206ENST00000506516 POLR1AO95602 1720 aaPredicted RBP10.63□□□□□ -0.71
GYPB-206ENST00000506516 ZFYVE9O95405 1425 aa10.62□□□□□ -0.71
GYPB-206ENST00000506516 RGL3Q3MIN7 710 aa10.62□□□□□ -0.71
GYPB-206ENST00000506516 TBX22Q9Y458 520 aa10.62□□□□□ -0.71
GYPB-206ENST00000506516 PLEKHG1Q9ULL1 1385 aa10.62□□□□□ -0.71
GYPB-206ENST00000506516 CLTCL1P53675 1640 aa10.61□□□□□ -0.71
GYPB-206ENST00000506516 IQGAP1P46940 1657 aa10.6□□□□□ -0.71
GYPB-206ENST00000506516 KCNA6P17658 529 aa10.6□□□□□ -0.71
GYPB-206ENST00000506516 IFNLR1Q8IU57 520 aaPredicted RBP10.59□□□□□ -0.71
GYPB-206ENST00000506516 FBXO41Q8TF61 875 aa10.59□□□□□ -0.71
GYPB-206ENST00000506516 ANKRD30BQ9BXX2 1392 aa10.59□□□□□ -0.71
GYPB-206ENST00000506516 LTBP4Q8N2S1 1624 aa10.58□□□□□ -0.72
GYPB-206ENST00000506516 CPS1P31327 1500 aa10.58□□□□□ -0.72
GYPB-206ENST00000506516 KIF1BO60333 1816 aa10.57□□□□□ -0.72
GYPB-206ENST00000506516 PROSER2Q86WR7 435 aaPredicted RBP10.56□□□□□ -0.72
GYPB-206ENST00000506516 SPATA31E1Q6ZUB1 1445 aa10.56□□□□□ -0.72
GYPB-206ENST00000506516 MYO5BQ9ULV0 1848 aa10.56□□□□□ -0.72
GYPB-206ENST00000506516 IQSEC2Q5JU85 1478 aa10.55□□□□□ -0.72
GYPB-206ENST00000506516 PIK3R4Q99570 1358 aa10.55□□□□□ -0.72
GYPB-206ENST00000506516 TOM1O60784 492 aa10.55□□□□□ -0.72
GYPB-206ENST00000506516 ILDR1Q86SU0 546 aaPredicted RBP10.55□□□□□ -0.72
GYPB-206ENST00000506516 PIP4P2Q8N4L2 257 aa10.55□□□□□ -0.72
GYPB-206ENST00000506516 SPDYE1Q8NFV5 336 aaPredicted RBP10.55□□□□□ -0.72
GYPB-206ENST00000506516 STAC3Q96MF2 364 aa10.55□□□□□ -0.72
GYPB-206ENST00000506516 NEXMIFQ5QGS0 1516 aa10.54□□□□□ -0.72
GYPB-206ENST00000506516 UBAP1LF5GYI3 381 aa10.54□□□□□ -0.72
GYPB-206ENST00000506516 ADAMTS13Q76LX8 1427 aa10.54□□□□□ -0.72
GYPB-206ENST00000506516 PCGF6Q9BYE7 350 aa10.54□□□□□ -0.72
GYPB-206ENST00000506516 AMOTL2Q9Y2J4 779 aa10.54□□□□□ -0.72
GYPB-206ENST00000506516 FXR2P51116 673 aaKnown RBP eCLIP10.53□□□□□ -0.72
GYPB-206ENST00000506516 ADGRF5Q8IZF2 1346 aa10.53□□□□□ -0.72
GYPB-206ENST00000506516 PLCD3Q8N3E9 789 aa10.52□□□□□ -0.73
GYPB-206ENST00000506516 DCAF11Q8TEB1 546 aa10.52□□□□□ -0.73
GYPB-206ENST00000506516 KDM2AQ9Y2K7 1162 aa10.52□□□□□ -0.73
GYPB-206ENST00000506516 DIP2AQ14689 1571 aa10.52□□□□□ -0.73
GYPB-206ENST00000506516 SETBP1Q9Y6X0 1596 aa10.52□□□□□ -0.73
GYPB-206ENST00000506516 C14orf37Q86TY3 774 aa10.51□□□□□ -0.73
GYPB-206ENST00000506516 LRRC7Q96NW7 1537 aa10.51□□□□□ -0.73
GYPB-206ENST00000506516 METP08581 1390 aa10.51□□□□□ -0.73
GYPB-206ENST00000506516 NEUROD1Q13562 356 aa10.5□□□□□ -0.73
GYPB-206ENST00000506516 MIER1Q8N108 512 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 279.7 ms