RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 SPDYE16A6NNV3 312 aaPredicted RBP7.48□□□□□ -1.21
NIPBL-204ENST00000504430 FOSBP53539 338 aa7.48□□□□□ -1.21
NIPBL-204ENST00000504430 VAC14Q08AM6 782 aa7.48□□□□□ -1.21
NIPBL-204ENST00000504430 SLC52A1Q9NWF4 448 aa7.47□□□□□ -1.21
NIPBL-204ENST00000504430 CLCN1P35523 988 aa7.47□□□□□ -1.21
NIPBL-204ENST00000504430 C1QBPQ07021 282 aaKnown RBP7.47□□□□□ -1.21
NIPBL-204ENST00000504430 DNAJC14Q6Y2X3 702 aaPredicted RBP7.47□□□□□ -1.21
NIPBL-204ENST00000504430 UCN2Q96RP3 112 aa7.47□□□□□ -1.21
NIPBL-204ENST00000504430 ANKRD62A6NC57 917 aa7.47□□□□□ -1.21
NIPBL-204ENST00000504430 TFIP11Q9UBB9 837 aaKnown RBP7.46□□□□□ -1.21
NIPBL-204ENST00000504430 BCL2L13Q9BXK5 485 aa7.46□□□□□ -1.22
NIPBL-204ENST00000504430 TBC1D2Q9BYX2 928 aa7.46□□□□□ -1.22
NIPBL-204ENST00000504430 PKNOX2Q96KN3 472 aa7.46□□□□□ -1.22
NIPBL-204ENST00000504430 FAM217BQ9NTX9 383 aaPredicted RBP7.46□□□□□ -1.22
NIPBL-204ENST00000504430 AP1G2O75843 785 aa7.45□□□□□ -1.22
NIPBL-204ENST00000504430 PATL2C9JE40 543 aaKnown RBP7.44□□□□□ -1.22
NIPBL-204ENST00000504430 STK32AQ8WU08 396 aa7.44□□□□□ -1.22
NIPBL-204ENST00000504430 MAP3K9P80192 1104 aa7.44□□□□□ -1.22
NIPBL-204ENST00000504430 C9orf131Q5VYM1 1079 aa7.44□□□□□ -1.22
NIPBL-204ENST00000504430 PHLDB3Q6NSJ2 640 aa7.44□□□□□ -1.22
NIPBL-204ENST00000504430 DPY19L2Q6NUT2 758 aa7.44□□□□□ -1.22
NIPBL-204ENST00000504430 RIPOR2Q9Y4F9 1068 aa7.44□□□□□ -1.22
NIPBL-204ENST00000504430 SERPINB4P48594 390 aa7.44□□□□□ -1.22
NIPBL-204ENST00000504430 ANKRD13AQ8IZ07 590 aa7.44□□□□□ -1.22
NIPBL-204ENST00000504430 GPR37L1O60883 481 aa7.43□□□□□ -1.22
NIPBL-204ENST00000504430 HMX1Q9NP08 348 aaPredicted RBP7.43□□□□□ -1.22
NIPBL-204ENST00000504430 DRC1Q96MC2 740 aa7.43□□□□□ -1.22
NIPBL-204ENST00000504430 CACNB1Q02641 598 aaPredicted RBP7.42□□□□□ -1.22
NIPBL-204ENST00000504430 HIRIP3Q9BW71 556 aaPredicted RBP7.42□□□□□ -1.22
NIPBL-204ENST00000504430 NPDC1Q9NQX5 325 aaPredicted RBP7.42□□□□□ -1.22
NIPBL-204ENST00000504430 RAB11FIP3O75154 756 aa7.42□□□□□ -1.22
NIPBL-204ENST00000504430 PLPP6Q8IY26 295 aa7.42□□□□□ -1.22
NIPBL-204ENST00000504430 MICAL1Q8TDZ2 1067 aa7.42□□□□□ -1.22
NIPBL-204ENST00000504430 SREK1Q8WXA9 508 aaKnown RBP7.42□□□□□ -1.22
NIPBL-204ENST00000504430 TRPC6Q9Y210 931 aa7.42□□□□□ -1.22
NIPBL-204ENST00000504430 ZC3H4Q9UPT8 1303 aaKnown RBP7.41□□□□□ -1.22
NIPBL-204ENST00000504430 VTI1AQ96AJ9 217 aa7.41□□□□□ -1.22
NIPBL-204ENST00000504430 BANK1Q8NDB2 785 aa7.4□□□□□ -1.22
NIPBL-204ENST00000504430 PPME1Q9Y570 386 aa7.4□□□□□ -1.22
NIPBL-204ENST00000504430 PCDHB15Q9Y5E8 787 aa7.4□□□□□ -1.22
NIPBL-204ENST00000504430 RTL5Q5HYW3 569 aaPredicted RBP7.39□□□□□ -1.23
NIPBL-204ENST00000504430 GPATCH3Q96I76 525 aa7.39□□□□□ -1.23
NIPBL-204ENST00000504430 DNAJC2Q99543 621 aaKnown RBP7.39□□□□□ -1.23
NIPBL-204ENST00000504430 SUGT1Q9Y2Z0 365 aa7.39□□□□□ -1.23
NIPBL-204ENST00000504430 TSR1Q2NL82 804 aaKnown RBP7.39□□□□□ -1.23
NIPBL-204ENST00000504430 TMEM164Q5U3C3 297 aa7.39□□□□□ -1.23
NIPBL-204ENST00000504430 SLAIN2Q9P270 581 aa7.39□□□□□ -1.23
NIPBL-204ENST00000504430 NAALADL2Q58DX5 795 aa7.38□□□□□ -1.23
NIPBL-204ENST00000504430 TEX2Q8IWB9 1127 aa7.38□□□□□ -1.23
NIPBL-204ENST00000504430 PRR7Q8TB68 274 aa7.38□□□□□ -1.23
NIPBL-204ENST00000504430 RBM33Q96EV2 1170 aaKnown RBP7.38□□□□□ -1.23
NIPBL-204ENST00000504430 USP17L8P0C7I0 530 aa7.38□□□□□ -1.23
NIPBL-204ENST00000504430 EPS8L1Q8TE68 723 aa7.38□□□□□ -1.23
NIPBL-204ENST00000504430 RBM27Q9P2N5 1060 aaKnown RBP7.38□□□□□ -1.23
NIPBL-204ENST00000504430 ZMIZ1Q9ULJ6 1067 aa7.38□□□□□ -1.23
NIPBL-204ENST00000504430 GJD4Q96KN9 370 aaPredicted RBP7.37□□□□□ -1.23
NIPBL-204ENST00000504430 TBC1D9Q6ZT07 1266 aa7.37□□□□□ -1.23
NIPBL-204ENST00000504430 METTL3Q86U44 580 aaKnown RBP7.37□□□□□ -1.23
NIPBL-204ENST00000504430 CABLES1Q8TDN4 633 aa7.37□□□□□ -1.23
NIPBL-204ENST00000504430 FOXK1P85037 733 aa7.36□□□□□ -1.23
NIPBL-204ENST00000504430 TSNAXIP1Q2TAA8 658 aa7.36□□□□□ -1.23
NIPBL-204ENST00000504430 REM2Q8IYK8 340 aaPredicted RBP7.36□□□□□ -1.23
NIPBL-204ENST00000504430 GNEQ9Y223 722 aaKnown RBP7.36□□□□□ -1.23
NIPBL-204ENST00000504430 C2orf72A6NCS6 295 aa7.36□□□□□ -1.23
NIPBL-204ENST00000504430 NDUFV2P19404 249 aa7.36□□□□□ -1.23
NIPBL-204ENST00000504430 WWC1Q8IX03 1113 aa7.36□□□□□ -1.23
NIPBL-204ENST00000504430 KIF12Q96FN5 646 aa7.36□□□□□ -1.23
NIPBL-204ENST00000504430 KLHL42Q9P2K6 505 aa7.36□□□□□ -1.23
NIPBL-204ENST00000504430 ANKRD33BA6NCL7 494 aa7.36□□□□□ -1.23
NIPBL-204ENST00000504430 GOLGA2Q08379 1002 aa7.36□□□□□ -1.23
NIPBL-204ENST00000504430 TMEM259Q4ZIN3 620 aa7.36□□□□□ -1.23
NIPBL-204ENST00000504430 RIC3Q7Z5B4 369 aa7.36□□□□□ -1.23
NIPBL-204ENST00000504430 RECKO95980 971 aa7.35□□□□□ -1.23
NIPBL-204ENST00000504430 FAM50AQ14320 339 aaKnown RBP7.35□□□□□ -1.23
NIPBL-204ENST00000504430 EVI5LQ96CN4 794 aa7.35□□□□□ -1.23
NIPBL-204ENST00000504430 PEX14O75381 377 aa7.35□□□□□ -1.23
NIPBL-204ENST00000504430 MAFBQ9Y5Q3 323 aaPredicted RBP7.35□□□□□ -1.23
NIPBL-204ENST00000504430 CENPBP07199 599 aaPredicted RBP7.35□□□□□ -1.23
NIPBL-204ENST00000504430 FOXD4L6Q3SYB3 417 aaPredicted RBP7.35□□□□□ -1.23
NIPBL-204ENST00000504430 FOXD4L3Q6VB84 417 aaPredicted RBP7.35□□□□□ -1.23
NIPBL-204ENST00000504430 ZNF710Q8N1W2 664 aa7.35□□□□□ -1.23
NIPBL-204ENST00000504430 SGSM3Q96HU1 749 aa7.35□□□□□ -1.23
NIPBL-204ENST00000504430 BIN2Q9UBW5 565 aaPredicted RBP7.35□□□□□ -1.23
NIPBL-204ENST00000504430 MOXD2PA6NHM9 499 aa7.34□□□□□ -1.23
NIPBL-204ENST00000504430 PPP2R2DQ66LE6 453 aa7.34□□□□□ -1.23
NIPBL-204ENST00000504430 PITPNM1O00562 1244 aa7.34□□□□□ -1.23
NIPBL-204ENST00000504430 ZEB1P37275 1124 aaPredicted RBP7.34□□□□□ -1.23
NIPBL-204ENST00000504430 EXOC8Q8IYI6 725 aa7.34□□□□□ -1.23
NIPBL-204ENST00000504430 CDCA7Q9BWT1 371 aaPredicted RBP7.34□□□□□ -1.23
NIPBL-204ENST00000504430 DPH6Q7L8W6 267 aa7.33□□□□□ -1.24
NIPBL-204ENST00000504430 TMC2Q8TDI7 906 aa7.33□□□□□ -1.24
NIPBL-204ENST00000504430 MAP3K7O43318 606 aa7.33□□□□□ -1.24
NIPBL-204ENST00000504430 MAP4K4O95819 1239 aaPredicted RBP7.33□□□□□ -1.24
NIPBL-204ENST00000504430 SPIRE2Q8WWL2 714 aa7.33□□□□□ -1.24
NIPBL-204ENST00000504430 TMEM106CQ9BVX2 250 aa7.33□□□□□ -1.24
NIPBL-204ENST00000504430 ANO2Q9NQ90 1003 aa7.33□□□□□ -1.24
NIPBL-204ENST00000504430 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.33□□□□□ -1.24
NIPBL-204ENST00000504430 MARSP56192 900 aaKnown RBP7.32□□□□□ -1.24
NIPBL-204ENST00000504430 PIK3CDO00329 1044 aa7.32□□□□□ -1.24
NIPBL-204ENST00000504430 TPD52L2O43399 206 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms