RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 TRAPPC8Q9Y2L5 1435 aa19.62■□□□□ 0.73
TNFRSF1B-203ENST00000492361 FTSJ3Q8IY81 847 aaKnown RBP19.62■□□□□ 0.73
TNFRSF1B-203ENST00000492361 WASHC2CQ9Y4E1 1318 aa19.61■□□□□ 0.73
TNFRSF1B-203ENST00000492361 MTHFSP49914 203 aa19.61■□□□□ 0.73
TNFRSF1B-203ENST00000492361 ADGRL2O95490 1459 aa19.61■□□□□ 0.73
TNFRSF1B-203ENST00000492361 MBD5Q9P267 1494 aa19.61■□□□□ 0.73
TNFRSF1B-203ENST00000492361 CENPQQ7L2Z9 268 aaPredicted RBP19.6■□□□□ 0.73
TNFRSF1B-203ENST00000492361 UHRF1BP1Q6BDS2 1440 aa19.6■□□□□ 0.73
TNFRSF1B-203ENST00000492361 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.6■□□□□ 0.73
TNFRSF1B-203ENST00000492361 ABCC10Q5T3U5 1492 aa19.59■□□□□ 0.73
TNFRSF1B-203ENST00000492361 GGNBP2Q9H3C7 697 aa19.59■□□□□ 0.73
TNFRSF1B-203ENST00000492361 ITSN2Q9NZM3 1697 aa19.59■□□□□ 0.73
TNFRSF1B-203ENST00000492361 SOX12O15370 315 aa19.59■□□□□ 0.73
TNFRSF1B-203ENST00000492361 CARD14Q9BXL6 1004 aa19.59■□□□□ 0.73
TNFRSF1B-203ENST00000492361 ELL2O00472 640 aaPredicted RBP19.58■□□□□ 0.73
TNFRSF1B-203ENST00000492361 NUP160Q12769 1436 aa19.58■□□□□ 0.73
TNFRSF1B-203ENST00000492361 TCP11L2Q8N4U5 519 aa19.58■□□□□ 0.73
TNFRSF1B-203ENST00000492361 POGKQ9P215 609 aa19.58■□□□□ 0.73
TNFRSF1B-203ENST00000492361 FAM161AQ3B820 660 aa19.58■□□□□ 0.72
TNFRSF1B-203ENST00000492361 EIF5BO60841 1220 aaKnown RBP19.58■□□□□ 0.72
TNFRSF1B-203ENST00000492361 SLFN5Q08AF3 891 aa19.58■□□□□ 0.72
TNFRSF1B-203ENST00000492361 TSR2Q969E8 191 aaKnown RBP19.58■□□□□ 0.72
TNFRSF1B-203ENST00000492361 PLA2R1Q13018 1463 aa19.58■□□□□ 0.72
TNFRSF1B-203ENST00000492361 PLEKHG5O94827 1062 aa19.57■□□□□ 0.72
TNFRSF1B-203ENST00000492361 CFAP53Q96M91 514 aa19.57■□□□□ 0.72
TNFRSF1B-203ENST00000492361 MINK1Q8N4C8 1332 aaPredicted RBP19.57■□□□□ 0.72
TNFRSF1B-203ENST00000492361 FBLN1P23142 703 aa19.57■□□□□ 0.72
TNFRSF1B-203ENST00000492361 IGHDP01880 384 aa19.57■□□□□ 0.72
TNFRSF1B-203ENST00000492361 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.57■□□□□ 0.72
TNFRSF1B-203ENST00000492361 RAPGEF3O95398 923 aa19.56■□□□□ 0.72
TNFRSF1B-203ENST00000492361 MS4A1P11836 297 aa19.56■□□□□ 0.72
TNFRSF1B-203ENST00000492361 SLC24A1O60721 1099 aa19.55■□□□□ 0.72
TNFRSF1B-203ENST00000492361 NFKBIBQ15653 356 aa19.55■□□□□ 0.72
TNFRSF1B-203ENST00000492361 E9PSI1 815 aa19.54■□□□□ 0.72
TNFRSF1B-203ENST00000492361 FRAT2O75474 233 aaPredicted RBP19.53■□□□□ 0.72
TNFRSF1B-203ENST00000492361 NUTM2FA1L443 756 aa19.53■□□□□ 0.72
TNFRSF1B-203ENST00000492361 BRPF3Q9ULD4 1205 aa19.53■□□□□ 0.72
TNFRSF1B-203ENST00000492361 UPF2Q9HAU5 1272 aaKnown RBP19.53■□□□□ 0.72
TNFRSF1B-203ENST00000492361 GZF1Q9H116 711 aaPredicted RBP19.52■□□□□ 0.72
TNFRSF1B-203ENST00000492361 ITPRIPQ8IWB1 547 aa19.52■□□□□ 0.71
TNFRSF1B-203ENST00000492361 WWC1Q8IX03 1113 aa19.51■□□□□ 0.71
TNFRSF1B-203ENST00000492361 EIF3AQ14152 1382 aaKnown RBP19.51■□□□□ 0.71
TNFRSF1B-203ENST00000492361 SMC4Q9NTJ3 1288 aa19.5■□□□□ 0.71
TNFRSF1B-203ENST00000492361 MAPK8IP3Q9UPT6 1336 aa19.49■□□□□ 0.71
TNFRSF1B-203ENST00000492361 MFAP1P55081 439 aaKnown RBP19.49■□□□□ 0.71
TNFRSF1B-203ENST00000492361 MAGI2Q86UL8 1455 aa19.49■□□□□ 0.71
TNFRSF1B-203ENST00000492361 CDC42BPAQ5VT25 1732 aa19.48■□□□□ 0.71
TNFRSF1B-203ENST00000492361 ERCC6L2Q5T890 1561 aa19.47■□□□□ 0.71
TNFRSF1B-203ENST00000492361 SEC24BO95487 1268 aa19.47■□□□□ 0.71
TNFRSF1B-203ENST00000492361 SAMD9LQ8IVG5 1584 aa19.47■□□□□ 0.71
TNFRSF1B-203ENST00000492361 COL17A1Q9UMD9 1497 aaPredicted RBP19.47■□□□□ 0.71
TNFRSF1B-203ENST00000492361 ARHGEF12Q9NZN5 1544 aa19.46■□□□□ 0.71
TNFRSF1B-203ENST00000492361 CFAP65Q6ZU64 1925 aaKnown RBP19.46■□□□□ 0.71
TNFRSF1B-203ENST00000492361 APBB1O00213 710 aa19.45■□□□□ 0.7
TNFRSF1B-203ENST00000492361 ADGBQ8N7X0 1667 aa19.45■□□□□ 0.7
TNFRSF1B-203ENST00000492361 FOXD4L1Q9NU39 408 aa19.45■□□□□ 0.7
TNFRSF1B-203ENST00000492361 SHANK2Q9UPX8 1470 aa19.44■□□□□ 0.7
TNFRSF1B-203ENST00000492361 ABCA8O94911 1581 aa19.44■□□□□ 0.7
TNFRSF1B-203ENST00000492361 RLBP1P12271 317 aa19.43■□□□□ 0.7
TNFRSF1B-203ENST00000492361 HMOX1P09601 288 aa19.43■□□□□ 0.7
TNFRSF1B-203ENST00000492361 NSD3Q9BZ95 1437 aa19.43■□□□□ 0.7
TNFRSF1B-203ENST00000492361 RUNDC1Q96C34 613 aa19.43■□□□□ 0.7
TNFRSF1B-203ENST00000492361 C8orf34Q49A92 452 aa19.42■□□□□ 0.7
TNFRSF1B-203ENST00000492361 HSP90AA1P07900 732 aaKnown RBP19.41■□□□□ 0.7
TNFRSF1B-203ENST00000492361 EXOSC9Q06265 439 aaKnown RBP19.41■□□□□ 0.7
TNFRSF1B-203ENST00000492361 GSE1Q14687 1217 aa19.41■□□□□ 0.7
TNFRSF1B-203ENST00000492361 CGNL1Q0VF96 1302 aa19.4■□□□□ 0.7
TNFRSF1B-203ENST00000492361 TTC37Q6PGP7 1564 aa19.4■□□□□ 0.7
TNFRSF1B-203ENST00000492361 THUMPD2Q9BTF0 503 aaKnown RBP19.4■□□□□ 0.7
TNFRSF1B-203ENST00000492361 PDZRN3Q9UPQ7 1066 aa19.4■□□□□ 0.7
TNFRSF1B-203ENST00000492361 KDM5DQ9BY66 1539 aa19.4■□□□□ 0.7
TNFRSF1B-203ENST00000492361 ANO8Q9HCE9 1232 aaPredicted RBP19.39■□□□□ 0.7
TNFRSF1B-203ENST00000492361 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.39■□□□□ 0.7
TNFRSF1B-203ENST00000492361 BECN1Q14457 450 aa19.39■□□□□ 0.69
TNFRSF1B-203ENST00000492361 PCDHB15Q9Y5E8 787 aa19.39■□□□□ 0.69
TNFRSF1B-203ENST00000492361 PLCH2O75038 1416 aa19.39■□□□□ 0.69
TNFRSF1B-203ENST00000492361 NOS1P29475 1434 aa19.38■□□□□ 0.69
TNFRSF1B-203ENST00000492361 UGGT1Q9NYU2 1555 aa19.38■□□□□ 0.69
TNFRSF1B-203ENST00000492361 SCAF11Q99590 1463 aaKnown RBP19.37■□□□□ 0.69
TNFRSF1B-203ENST00000492361 RIPK4P57078 832 aa19.37■□□□□ 0.69
TNFRSF1B-203ENST00000492361 C1orf115Q9H7X2 142 aa19.37■□□□□ 0.69
TNFRSF1B-203ENST00000492361 GPRASP1Q5JY77 1395 aa19.37■□□□□ 0.69
TNFRSF1B-203ENST00000492361 RARSP54136 660 aaKnown RBP19.36■□□□□ 0.69
TNFRSF1B-203ENST00000492361 MYH16Q9H6N6 1097 aa19.36■□□□□ 0.69
TNFRSF1B-203ENST00000492361 CYB5RLQ6IPT4 315 aa19.36■□□□□ 0.69
TNFRSF1B-203ENST00000492361 PRAM1Q96QH2 718 aa19.35■□□□□ 0.69
TNFRSF1B-203ENST00000492361 RWDD1Q9H446 243 aaPredicted RBP19.35■□□□□ 0.69
TNFRSF1B-203ENST00000492361 LNPKQ9C0E8 428 aa19.34■□□□□ 0.69
TNFRSF1B-203ENST00000492361 EVC2Q86UK5 1308 aa19.34■□□□□ 0.69
TNFRSF1B-203ENST00000492361 KDM2BQ8NHM5 1336 aa19.34■□□□□ 0.69
TNFRSF1B-203ENST00000492361 FBXO31Q5XUX0 539 aaPredicted RBP19.33■□□□□ 0.68
TNFRSF1B-203ENST00000492361 ZKSCAN2Q63HK3 967 aa19.32■□□□□ 0.68
TNFRSF1B-203ENST00000492361 DZIP1LQ8IYY4 767 aaKnown RBP19.32■□□□□ 0.68
TNFRSF1B-203ENST00000492361 WDR7Q9Y4E6 1490 aa19.32■□□□□ 0.68
TNFRSF1B-203ENST00000492361 FANCAO15360 1455 aa19.31■□□□□ 0.68
TNFRSF1B-203ENST00000492361 PMFBP1Q8TBY8 1022 aa19.31■□□□□ 0.68
TNFRSF1B-203ENST00000492361 BLMP54132 1417 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF1B-203ENST00000492361 VGFO15240 615 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF1B-203ENST00000492361 CABP1Q9NZU7 370 aa19.31■□□□□ 0.68
TNFRSF1B-203ENST00000492361 DUOX2Q9NRD8 1548 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms