RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 BMP2KQ9NSY1 1161 aaPredicted RBP14.59□□□□□ -0.07
SRRM1-217ENST00000490543 MBD5Q9P267 1494 aa14.58□□□□□ -0.08
SRRM1-217ENST00000490543 MTUS2Q5JR59 1369 aa14.58□□□□□ -0.08
SRRM1-217ENST00000490543 KIF3BO15066 747 aa14.57□□□□□ -0.08
SRRM1-217ENST00000490543 TOM1O60784 492 aa14.57□□□□□ -0.08
SRRM1-217ENST00000490543 TIE1P35590 1138 aa14.57□□□□□ -0.08
SRRM1-217ENST00000490543 ATN1P54259 1190 aaPredicted RBP14.57□□□□□ -0.08
SRRM1-217ENST00000490543 ADGBQ8N7X0 1667 aa14.57□□□□□ -0.08
SRRM1-217ENST00000490543 DHX29Q7Z478 1369 aaKnown RBP14.57□□□□□ -0.08
SRRM1-217ENST00000490543 TNRQ92752 1358 aa14.57□□□□□ -0.08
SRRM1-217ENST00000490543 SHANK2Q9UPX8 1470 aa14.56□□□□□ -0.08
SRRM1-217ENST00000490543 MED1Q15648 1581 aaPredicted RBP14.56□□□□□ -0.08
SRRM1-217ENST00000490543 NEURL4Q96JN8 1562 aa14.56□□□□□ -0.08
SRRM1-217ENST00000490543 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.55□□□□□ -0.08
SRRM1-217ENST00000490543 ANKLE2Q86XL3 938 aa14.54□□□□□ -0.08
SRRM1-217ENST00000490543 RTEL1-TNFRSF6BF6WH68 1400 aa14.54□□□□□ -0.08
SRRM1-217ENST00000490543 TIAM1Q13009 1591 aa14.53□□□□□ -0.08
SRRM1-217ENST00000490543 CPS1P31327 1500 aa14.53□□□□□ -0.08
SRRM1-217ENST00000490543 CIZ1Q9ULV3 898 aaPredicted RBP14.53□□□□□ -0.08
SRRM1-217ENST00000490543 WASHC2CQ9Y4E1 1318 aa14.52□□□□□ -0.08
SRRM1-217ENST00000490543 TTLL13PA6NNM8 815 aa14.52□□□□□ -0.09
SRRM1-217ENST00000490543 PZPP20742 1482 aa14.51□□□□□ -0.09
SRRM1-217ENST00000490543 THEMISQ8N1K5 641 aaPredicted RBP14.51□□□□□ -0.09
SRRM1-217ENST00000490543 POLR1AO95602 1720 aaPredicted RBP14.51□□□□□ -0.09
SRRM1-217ENST00000490543 ALKQ9UM73 1620 aa14.51□□□□□ -0.09
SRRM1-217ENST00000490543 VWDEQ8N2E2 1590 aa14.51□□□□□ -0.09
SRRM1-217ENST00000490543 MIA2Q96PC5 1412 aa14.5□□□□□ -0.09
SRRM1-217ENST00000490543 CHRM1P11229 460 aaPredicted RBP14.49□□□□□ -0.09
SRRM1-217ENST00000490543 SLC39A7Q92504 469 aa14.49□□□□□ -0.09
SRRM1-217ENST00000490543 PCDHB8Q9UN66 801 aa14.49□□□□□ -0.09
SRRM1-217ENST00000490543 KDM5DQ9BY66 1539 aa14.48□□□□□ -0.09
SRRM1-217ENST00000490543 METRNQ9UJH8 293 aa14.48□□□□□ -0.09
SRRM1-217ENST00000490543 NPHP4O75161 1426 aaPredicted RBP14.48□□□□□ -0.09
SRRM1-217ENST00000490543 CEP162Q5TB80 1403 aa14.47□□□□□ -0.09
SRRM1-217ENST00000490543 MED14O60244 1454 aa14.46□□□□□ -0.09
SRRM1-217ENST00000490543 C7P10643 843 aa14.46□□□□□ -0.09
SRRM1-217ENST00000490543 UGGT1Q9NYU2 1555 aa14.46□□□□□ -0.09
SRRM1-217ENST00000490543 EHBP1L1Q8N3D4 1523 aa14.46□□□□□ -0.1
SRRM1-217ENST00000490543 CCDC141Q6ZP82 1450 aa14.45□□□□□ -0.1
SRRM1-217ENST00000490543 NLRP1Q9C000 1473 aa14.45□□□□□ -0.1
SRRM1-217ENST00000490543 RSPH4AQ5TD94 716 aa14.44□□□□□ -0.1
SRRM1-217ENST00000490543 TMEM106CQ9BVX2 250 aa14.44□□□□□ -0.1
SRRM1-217ENST00000490543 FAM135AQ9P2D6 1515 aa14.44□□□□□ -0.1
SRRM1-217ENST00000490543 CAMSAP2Q08AD1 1489 aa14.44□□□□□ -0.1
SRRM1-217ENST00000490543 STRCP1A6NGW2 1772 aa14.43□□□□□ -0.1
SRRM1-217ENST00000490543 DEPDC5O75140 1603 aa14.43□□□□□ -0.1
SRRM1-217ENST00000490543 NCOA2Q15596 1464 aa14.43□□□□□ -0.1
SRRM1-217ENST00000490543 LRRC7Q96NW7 1537 aa14.42□□□□□ -0.1
SRRM1-217ENST00000490543 POTEB2H3BUK9 544 aa14.42□□□□□ -0.1
SRRM1-217ENST00000490543 ZNF467Q7Z7K2 595 aaPredicted RBP14.42□□□□□ -0.1
SRRM1-217ENST00000490543 TRIM35Q9UPQ4 493 aa14.42□□□□□ -0.1
SRRM1-217ENST00000490543 TSPY4P0CV99 314 aa14.41□□□□□ -0.1
SRRM1-217ENST00000490543 TSPY10P0CW01 314 aa14.41□□□□□ -0.1
SRRM1-217ENST00000490543 IQGAP1P46940 1657 aa14.41□□□□□ -0.1
SRRM1-217ENST00000490543 RGS17Q9UGC6 210 aaPredicted RBP14.4□□□□□ -0.1
SRRM1-217ENST00000490543 ABCC3O15438 1527 aa14.38□□□□□ -0.11
SRRM1-217ENST00000490543 LTKP29376 864 aa14.38□□□□□ -0.11
SRRM1-217ENST00000490543 ARHGEF5Q12774 1597 aa14.37□□□□□ -0.11
SRRM1-217ENST00000490543 CFAP65Q6ZU64 1925 aaKnown RBP14.36□□□□□ -0.11
SRRM1-217ENST00000490543 ERVK-7P63135 1459 aa14.36□□□□□ -0.11
SRRM1-217ENST00000490543 RNF17Q9BXT8 1623 aaKnown RBP14.34□□□□□ -0.11
SRRM1-217ENST00000490543 ZC3H13Q5T200 1668 aaKnown RBP14.34□□□□□ -0.11
SRRM1-217ENST00000490543 POTEFA5A3E0 1075 aa14.34□□□□□ -0.11
SRRM1-217ENST00000490543 TXNDC2Q86VQ3 553 aa14.34□□□□□ -0.11
SRRM1-217ENST00000490543 SCAF11Q99590 1463 aaKnown RBP14.32□□□□□ -0.12
SRRM1-217ENST00000490543 SYNMO15061 1565 aa14.32□□□□□ -0.12
SRRM1-217ENST00000490543 IER5LQ5T953 404 aa14.32□□□□□ -0.12
SRRM1-217ENST00000490543 MROH1Q8NDA8 1641 aa14.32□□□□□ -0.12
SRRM1-217ENST00000490543 UBR1Q8IWV7 1749 aa14.32□□□□□ -0.12
SRRM1-217ENST00000490543 POTEAQ6S8J7 498 aa14.3□□□□□ -0.12
SRRM1-217ENST00000490543 COLQQ9Y215 455 aaPredicted RBP14.3□□□□□ -0.12
SRRM1-217ENST00000490543 ARHGAP23Q9P227 1491 aa14.3□□□□□ -0.12
SRRM1-217ENST00000490543 MAST1Q9Y2H9 1570 aa14.3□□□□□ -0.12
SRRM1-217ENST00000490543 CEP152O94986 1710 aa14.29□□□□□ -0.12
SRRM1-217ENST00000490543 XIRP1Q702N8 1843 aaKnown RBP14.29□□□□□ -0.12
SRRM1-217ENST00000490543 PSEN1P49768 467 aa14.29□□□□□ -0.12
SRRM1-217ENST00000490543 KANK4Q5T7N3 995 aaPredicted RBP14.29□□□□□ -0.12
SRRM1-217ENST00000490543 SLIT1O75093 1534 aa14.28□□□□□ -0.12
SRRM1-217ENST00000490543 SEC24BO95487 1268 aa14.28□□□□□ -0.12
SRRM1-217ENST00000490543 LRRC9Q6ZRR7 1453 aa14.28□□□□□ -0.12
SRRM1-217ENST00000490543 EIF2AK4Q9P2K8 1649 aaKnown RBP14.27□□□□□ -0.12
SRRM1-217ENST00000490543 FAM135BQ49AJ0 1406 aa14.27□□□□□ -0.12
SRRM1-217ENST00000490543 POTEJP0CG39 1038 aa14.27□□□□□ -0.13
SRRM1-217ENST00000490543 RBM33Q96EV2 1170 aaKnown RBP14.27□□□□□ -0.13
SRRM1-217ENST00000490543 OTUD5Q96G74 571 aa14.27□□□□□ -0.13
SRRM1-217ENST00000490543 EID1Q9Y6B2 187 aa14.27□□□□□ -0.13
SRRM1-217ENST00000490543 PDAP1Q13442 181 aaKnown RBP14.26□□□□□ -0.13
SRRM1-217ENST00000490543 TMEM94Q12767 1356 aa14.25□□□□□ -0.13
SRRM1-217ENST00000490543 ARHGAP31Q2M1Z3 1444 aa14.24□□□□□ -0.13
SRRM1-217ENST00000490543 TMEM2Q9UHN6 1383 aa14.24□□□□□ -0.13
SRRM1-217ENST00000490543 SLC26A8Q96RN1 970 aa14.24□□□□□ -0.13
SRRM1-217ENST00000490543 RRP7BPQ9NSQ0 103 aa14.24□□□□□ -0.13
SRRM1-217ENST00000490543 DUOX2Q9NRD8 1548 aa14.24□□□□□ -0.13
SRRM1-217ENST00000490543 KCNA6P17658 529 aa14.23□□□□□ -0.13
SRRM1-217ENST00000490543 IDI1Q13907 227 aa14.23□□□□□ -0.13
SRRM1-217ENST00000490543 MYOM3Q5VTT5 1437 aa14.23□□□□□ -0.13
SRRM1-217ENST00000490543 PIK3C2BO00750 1634 aa14.23□□□□□ -0.13
SRRM1-217ENST00000490543 KIF15Q9NS87 1388 aa14.22□□□□□ -0.13
SRRM1-217ENST00000490543 PROSER2Q86WR7 435 aaPredicted RBP14.22□□□□□ -0.13
SRRM1-217ENST00000490543 IRX5P78411 483 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms