RNA–Protein interactions for RNA: ENST00000487656.1

MACF1-221, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-221ENST00000487656 PIP4K2BP78356 416 aa8.82□□□□□ -1
MACF1-221ENST00000487656 CHRDL2Q6WN34 429 aa8.82□□□□□ -1
MACF1-221ENST00000487656 PZPP20742 1482 aa8.82□□□□□ -1
MACF1-221ENST00000487656 CPS1P31327 1500 aa8.81□□□□□ -1
MACF1-221ENST00000487656 KDM5DQ9BY66 1539 aa8.81□□□□□ -1
MACF1-221ENST00000487656 RIOK3O14730 519 aaKnown RBP8.81□□□□□ -1
MACF1-221ENST00000487656 NCOA2Q15596 1464 aa8.81□□□□□ -1
MACF1-221ENST00000487656 MIA2Q96PC5 1412 aa8.8□□□□□ -1
MACF1-221ENST00000487656 RNF25Q96BH1 459 aaPredicted RBP8.8□□□□□ -1
MACF1-221ENST00000487656 TSPYL2Q9H2G4 693 aaPredicted RBP8.8□□□□□ -1
MACF1-221ENST00000487656 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.8□□□□□ -1
MACF1-221ENST00000487656 CAMSAP2Q08AD1 1489 aa8.8□□□□□ -1
MACF1-221ENST00000487656 NLRP1Q9C000 1473 aa8.8□□□□□ -1
MACF1-221ENST00000487656 SHANK2Q9UPX8 1470 aa8.8□□□□□ -1
MACF1-221ENST00000487656 CFAP65Q6ZU64 1925 aaKnown RBP8.8□□□□□ -1
MACF1-221ENST00000487656 UGGT1Q9NYU2 1555 aa8.79□□□□□ -1
MACF1-221ENST00000487656 PYGBP11216 843 aa8.79□□□□□ -1
MACF1-221ENST00000487656 HSPA1LP34931 641 aa8.79□□□□□ -1
MACF1-221ENST00000487656 PAXIP1Q6ZW49 1069 aaPredicted RBP8.79□□□□□ -1
MACF1-221ENST00000487656 ARHGEF5Q12774 1597 aa8.78□□□□□ -1
MACF1-221ENST00000487656 CFAP44Q96MT7 982 aa8.78□□□□□ -1
MACF1-221ENST00000487656 DEPDC5O75140 1603 aa8.77□□□□□ -1.01
MACF1-221ENST00000487656 HS6ST3Q8IZP7 471 aa8.77□□□□□ -1.01
MACF1-221ENST00000487656 NPHP4O75161 1426 aaPredicted RBP8.77□□□□□ -1.01
MACF1-221ENST00000487656 NEURL4Q96JN8 1562 aa8.77□□□□□ -1.01
MACF1-221ENST00000487656 MED14O60244 1454 aa8.77□□□□□ -1.01
MACF1-221ENST00000487656 PIP4P2Q8N4L2 257 aa8.76□□□□□ -1.01
MACF1-221ENST00000487656 SPRYD3Q8NCJ5 442 aa8.76□□□□□ -1.01
MACF1-221ENST00000487656 ZC3H13Q5T200 1668 aaKnown RBP8.75□□□□□ -1.01
MACF1-221ENST00000487656 VGFO15240 615 aaPredicted RBP8.75□□□□□ -1.01
MACF1-221ENST00000487656 IQGAP1P46940 1657 aa8.75□□□□□ -1.01
MACF1-221ENST00000487656 VWDEQ8N2E2 1590 aa8.74□□□□□ -1.01
MACF1-221ENST00000487656 RNF17Q9BXT8 1623 aaKnown RBP8.74□□□□□ -1.01
MACF1-221ENST00000487656 EIF2AK4Q9P2K8 1649 aaKnown RBP8.74□□□□□ -1.01
MACF1-221ENST00000487656 PAK3O75914 559 aaPredicted RBP8.74□□□□□ -1.01
MACF1-221ENST00000487656 LRRC9Q6ZRR7 1453 aa8.74□□□□□ -1.01
MACF1-221ENST00000487656 MAST1Q9Y2H9 1570 aa8.73□□□□□ -1.01
MACF1-221ENST00000487656 TXNDC2Q86VQ3 553 aa8.73□□□□□ -1.01
MACF1-221ENST00000487656 EID1Q9Y6B2 187 aa8.73□□□□□ -1.01
MACF1-221ENST00000487656 MYOM3Q5VTT5 1437 aa8.72□□□□□ -1.01
MACF1-221ENST00000487656 VPS8Q8N3P4 1428 aa8.72□□□□□ -1.01
MACF1-221ENST00000487656 ABCC3O15438 1527 aa8.72□□□□□ -1.01
MACF1-221ENST00000487656 STK25O00506 426 aa8.72□□□□□ -1.01
MACF1-221ENST00000487656 KANK4Q5T7N3 995 aaPredicted RBP8.72□□□□□ -1.01
MACF1-221ENST00000487656 MED1Q15648 1581 aaPredicted RBP8.72□□□□□ -1.01
MACF1-221ENST00000487656 CEP152O94986 1710 aa8.71□□□□□ -1.01
MACF1-221ENST00000487656 ERVK-7P63135 1459 aa8.71□□□□□ -1.01
MACF1-221ENST00000487656 MAP3K1Q13233 1512 aa8.71□□□□□ -1.01
MACF1-221ENST00000487656 DUOX2Q9NRD8 1548 aa8.71□□□□□ -1.01
MACF1-221ENST00000487656 LOC105371045A0A1W2PR82 267 aa8.71□□□□□ -1.02
MACF1-221ENST00000487656 UBR1Q8IWV7 1749 aa8.71□□□□□ -1.02
MACF1-221ENST00000487656 STRCP1A6NGW2 1772 aa8.71□□□□□ -1.02
MACF1-221ENST00000487656 LRRC7Q96NW7 1537 aa8.7□□□□□ -1.02
MACF1-221ENST00000487656 SGIP1Q9BQI5 828 aa8.7□□□□□ -1.02
MACF1-221ENST00000487656 RRP7BPQ9NSQ0 103 aa8.7□□□□□ -1.02
MACF1-221ENST00000487656 KANK1Q14678 1352 aa8.7□□□□□ -1.02
MACF1-221ENST00000487656 SCAF11Q99590 1463 aaKnown RBP8.7□□□□□ -1.02
MACF1-221ENST00000487656 LTKP29376 864 aa8.69□□□□□ -1.02
MACF1-221ENST00000487656 ZNF467Q7Z7K2 595 aaPredicted RBP8.69□□□□□ -1.02
MACF1-221ENST00000487656 ARHGAP31Q2M1Z3 1444 aa8.69□□□□□ -1.02
MACF1-221ENST00000487656 SYNMO15061 1565 aa8.69□□□□□ -1.02
MACF1-221ENST00000487656 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.68□□□□□ -1.02
MACF1-221ENST00000487656 VSIG10Q8N0Z9 540 aa8.68□□□□□ -1.02
MACF1-221ENST00000487656 ZFP91Q96JP5 570 aaPredicted RBP8.68□□□□□ -1.02
MACF1-221ENST00000487656 STK24Q9Y6E0 443 aa8.68□□□□□ -1.02
MACF1-221ENST00000487656 CCDC61Q9Y6R9 512 aa8.68□□□□□ -1.02
MACF1-221ENST00000487656 KIF15Q9NS87 1388 aa8.68□□□□□ -1.02
MACF1-221ENST00000487656 MROH1Q8NDA8 1641 aa8.68□□□□□ -1.02
MACF1-221ENST00000487656 SLIT1O75093 1534 aa8.67□□□□□ -1.02
MACF1-221ENST00000487656 ERBINQ96RT1 1412 aa8.67□□□□□ -1.02
MACF1-221ENST00000487656 ALKQ9UM73 1620 aa8.67□□□□□ -1.02
MACF1-221ENST00000487656 ARHGAP23Q9P227 1491 aa8.66□□□□□ -1.02
MACF1-221ENST00000487656 TMEM2Q9UHN6 1383 aa8.66□□□□□ -1.02
MACF1-221ENST00000487656 BCL11BQ9C0K0 894 aaPredicted RBP8.66□□□□□ -1.02
MACF1-221ENST00000487656 PRDM15P57071 1507 aaPredicted RBP8.65□□□□□ -1.02
MACF1-221ENST00000487656 ABCC5O15440 1437 aa8.65□□□□□ -1.02
MACF1-221ENST00000487656 ANKRD30AQ9BXX3 1397 aa8.65□□□□□ -1.02
MACF1-221ENST00000487656 HDGFP51858 240 aaKnown RBP8.65□□□□□ -1.02
MACF1-221ENST00000487656 IDI1Q13907 227 aa8.65□□□□□ -1.02
MACF1-221ENST00000487656 PROSER2Q86WR7 435 aaPredicted RBP8.65□□□□□ -1.02
MACF1-221ENST00000487656 BCANQ96GW7 911 aa8.65□□□□□ -1.02
MACF1-221ENST00000487656 CROCC2H7BZ55 1655 aa8.65□□□□□ -1.03
MACF1-221ENST00000487656 PIK3C2BO00750 1634 aa8.65□□□□□ -1.03
MACF1-221ENST00000487656 PTPN23Q9H3S7 1636 aa8.65□□□□□ -1.03
MACF1-221ENST00000487656 XIRP1Q702N8 1843 aaKnown RBP8.64□□□□□ -1.03
MACF1-221ENST00000487656 KCNA6P17658 529 aa8.64□□□□□ -1.03
MACF1-221ENST00000487656 SLC52A1Q9NWF4 448 aa8.64□□□□□ -1.03
MACF1-221ENST00000487656 CHIC2Q9UKJ5 165 aa8.64□□□□□ -1.03
MACF1-221ENST00000487656 KDM5AP29375 1690 aaKnown RBP8.64□□□□□ -1.03
MACF1-221ENST00000487656 DAPK1P53355 1430 aa8.63□□□□□ -1.03
MACF1-221ENST00000487656 FAM135BQ49AJ0 1406 aa8.63□□□□□ -1.03
MACF1-221ENST00000487656 PDAP1Q13442 181 aaKnown RBP8.63□□□□□ -1.03
MACF1-221ENST00000487656 NKX1-1Q15270 411 aaPredicted RBP8.63□□□□□ -1.03
MACF1-221ENST00000487656 SLC26A8Q96RN1 970 aa8.63□□□□□ -1.03
MACF1-221ENST00000487656 PCDHB8Q9UN66 801 aa8.63□□□□□ -1.03
MACF1-221ENST00000487656 PCDHB13Q9Y5F0 798 aa8.63□□□□□ -1.03
MACF1-221ENST00000487656 EFCAB6Q5THR3 1501 aa8.63□□□□□ -1.03
MACF1-221ENST00000487656 CD44P16070 742 aaKnown RBP8.62□□□□□ -1.03
MACF1-221ENST00000487656 ZNF579Q8NAF0 562 aaKnown RBP8.62□□□□□ -1.03
MACF1-221ENST00000487656 FGD6Q6ZV73 1430 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms