RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 SLC52A1Q9NWF4 448 aa10.01□□□□□ -0.81
UBR4-214ENST00000486515 PZPP20742 1482 aa10.01□□□□□ -0.81
UBR4-214ENST00000486515 RPRD2Q5VT52 1461 aaKnown RBP10.01□□□□□ -0.81
UBR4-214ENST00000486515 ANKLE2Q86XL3 938 aa10□□□□□ -0.81
UBR4-214ENST00000486515 LMTK2Q8IWU2 1503 aa10□□□□□ -0.81
UBR4-214ENST00000486515 IQGAP3Q86VI3 1631 aa10□□□□□ -0.81
UBR4-214ENST00000486515 TONSLQ96HA7 1378 aa10□□□□□ -0.81
UBR4-214ENST00000486515 ARHGAP31Q2M1Z3 1444 aa9.99□□□□□ -0.81
UBR4-214ENST00000486515 ABCC3O15438 1527 aa9.99□□□□□ -0.81
UBR4-214ENST00000486515 TIMELESSQ9UNS1 1208 aa9.99□□□□□ -0.81
UBR4-214ENST00000486515 ATAD2Q6PL18 1390 aa9.99□□□□□ -0.81
UBR4-214ENST00000486515 RGS12O14924 1447 aa9.99□□□□□ -0.81
UBR4-214ENST00000486515 LRP5O75197 1615 aa9.98□□□□□ -0.81
UBR4-214ENST00000486515 HDGFP51858 240 aaKnown RBP9.98□□□□□ -0.81
UBR4-214ENST00000486515 ZNF326Q5BKZ1 582 aaKnown RBP9.98□□□□□ -0.81
UBR4-214ENST00000486515 ZC3H13Q5T200 1668 aaKnown RBP9.98□□□□□ -0.81
UBR4-214ENST00000486515 SIN3AQ96ST3 1273 aa9.97□□□□□ -0.81
UBR4-214ENST00000486515 ANKRD30BQ9BXX2 1392 aa9.97□□□□□ -0.81
UBR4-214ENST00000486515 NPHP4O75161 1426 aaPredicted RBP9.97□□□□□ -0.81
UBR4-214ENST00000486515 A2ML1A8K2U0 1454 aa9.97□□□□□ -0.81
UBR4-214ENST00000486515 EFCAB6Q5THR3 1501 aa9.97□□□□□ -0.81
UBR4-214ENST00000486515 LRP6O75581 1613 aa9.96□□□□□ -0.81
UBR4-214ENST00000486515 TET3O43151 1660 aa9.96□□□□□ -0.81
UBR4-214ENST00000486515 CLTCQ00610 1675 aaKnown RBP9.96□□□□□ -0.81
UBR4-214ENST00000486515 RGL3Q3MIN7 710 aa9.96□□□□□ -0.82
UBR4-214ENST00000486515 FBXO31Q5XUX0 539 aaPredicted RBP9.96□□□□□ -0.82
UBR4-214ENST00000486515 TNRQ92752 1358 aa9.96□□□□□ -0.82
UBR4-214ENST00000486515 SYNMO15061 1565 aa9.96□□□□□ -0.82
UBR4-214ENST00000486515 SPATA31A6Q5VVP1 1343 aa9.95□□□□□ -0.82
UBR4-214ENST00000486515 E9PCH4 1651 aa9.95□□□□□ -0.82
UBR4-214ENST00000486515 MROH2AA6NES4 1674 aa9.94□□□□□ -0.82
UBR4-214ENST00000486515 POLR1AO95602 1720 aaPredicted RBP9.93□□□□□ -0.82
UBR4-214ENST00000486515 RBM6P78332 1123 aaKnown RBP9.93□□□□□ -0.82
UBR4-214ENST00000486515 STAC3Q96MF2 364 aa9.93□□□□□ -0.82
UBR4-214ENST00000486515 ERVK-7P63135 1459 aa9.92□□□□□ -0.82
UBR4-214ENST00000486515 PPP1R15AO75807 674 aaPredicted RBP9.92□□□□□ -0.82
UBR4-214ENST00000486515 IDI1Q13907 227 aa9.92□□□□□ -0.82
UBR4-214ENST00000486515 CCDC125Q86Z20 511 aa9.92□□□□□ -0.82
UBR4-214ENST00000486515 THEMISQ8N1K5 641 aaPredicted RBP9.92□□□□□ -0.82
UBR4-214ENST00000486515 MED14O60244 1454 aa9.91□□□□□ -0.82
UBR4-214ENST00000486515 NOS1P29475 1434 aa9.91□□□□□ -0.82
UBR4-214ENST00000486515 SPHKAPQ2M3C7 1700 aa9.91□□□□□ -0.82
UBR4-214ENST00000486515 RPGRIP1LQ68CZ1 1315 aa9.91□□□□□ -0.82
UBR4-214ENST00000486515 VGFO15240 615 aaPredicted RBP9.91□□□□□ -0.82
UBR4-214ENST00000486515 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.91□□□□□ -0.82
UBR4-214ENST00000486515 DCAF11Q8TEB1 546 aa9.91□□□□□ -0.82
UBR4-214ENST00000486515 BCANQ96GW7 911 aa9.91□□□□□ -0.82
UBR4-214ENST00000486515 KDM2AQ9Y2K7 1162 aa9.91□□□□□ -0.82
UBR4-214ENST00000486515 EID1Q9Y6B2 187 aa9.91□□□□□ -0.82
UBR4-214ENST00000486515 CFAP65Q6ZU64 1925 aaKnown RBP9.91□□□□□ -0.82
UBR4-214ENST00000486515 TRPM2O94759 1503 aa9.91□□□□□ -0.82
UBR4-214ENST00000486515 STRCP1A6NGW2 1772 aa9.91□□□□□ -0.82
UBR4-214ENST00000486515 AFF2P51816 1311 aa9.9□□□□□ -0.82
UBR4-214ENST00000486515 SLC34A2O95436 690 aa9.9□□□□□ -0.82
UBR4-214ENST00000486515 NLRP1Q9C000 1473 aa9.9□□□□□ -0.83
UBR4-214ENST00000486515 ROBO1Q9Y6N7 1651 aa9.9□□□□□ -0.83
UBR4-214ENST00000486515 C1QTNF8P60827 252 aa9.89□□□□□ -0.83
UBR4-214ENST00000486515 QTRT2Q9H974 415 aaKnown RBP9.89□□□□□ -0.83
UBR4-214ENST00000486515 UGGT1Q9NYU2 1555 aa9.88□□□□□ -0.83
UBR4-214ENST00000486515 L3MBTL2Q969R5 705 aa9.88□□□□□ -0.83
UBR4-214ENST00000486515 CLTCL1P53675 1640 aa9.87□□□□□ -0.83
UBR4-214ENST00000486515 NGLY1Q96IV0 654 aa9.87□□□□□ -0.83
UBR4-214ENST00000486515 CEP350Q5VT06 3117 aa9.87□□□□□ -0.83
UBR4-214ENST00000486515 EP400Q96L91 3159 aa9.86□□□□□ -0.83
UBR4-214ENST00000486515 PHLPP1O60346 1717 aa9.85□□□□□ -0.83
UBR4-214ENST00000486515 MYO5BQ9ULV0 1848 aa9.84□□□□□ -0.83
UBR4-214ENST00000486515 PSDA5PKW4 1024 aaPredicted RBP9.84□□□□□ -0.83
UBR4-214ENST00000486515 TXNDC2Q86VQ3 553 aa9.84□□□□□ -0.83
UBR4-214ENST00000486515 ZNF784Q8NCA9 323 aaPredicted RBP9.84□□□□□ -0.83
UBR4-214ENST00000486515 NHSL1Q5SYE7 1610 aa9.84□□□□□ -0.83
UBR4-214ENST00000486515 IQGAP1P46940 1657 aa9.83□□□□□ -0.84
UBR4-214ENST00000486515 SPATA31E1Q6ZUB1 1445 aa9.82□□□□□ -0.84
UBR4-214ENST00000486515 PCDH10Q9P2E7 1040 aa9.82□□□□□ -0.84
UBR4-214ENST00000486515 TMEM94Q12767 1356 aa9.82□□□□□ -0.84
UBR4-214ENST00000486515 TMEM2Q9UHN6 1383 aa9.82□□□□□ -0.84
UBR4-214ENST00000486515 PIK3C2BO00750 1634 aa9.82□□□□□ -0.84
UBR4-214ENST00000486515 ADGRB3O60242 1522 aa9.82□□□□□ -0.84
UBR4-214ENST00000486515 RIMS2Q9UQ26 1411 aa9.82□□□□□ -0.84
UBR4-214ENST00000486515 SLAIN2Q9P270 581 aa9.81□□□□□ -0.84
UBR4-214ENST00000486515 DCAF8L1A6NGE4 600 aa9.8□□□□□ -0.84
UBR4-214ENST00000486515 DEFB132Q7Z7B7 95 aa9.8□□□□□ -0.84
UBR4-214ENST00000486515 COL16A1Q07092 1604 aaPredicted RBP9.8□□□□□ -0.84
UBR4-214ENST00000486515 KIF1BO60333 1816 aa9.79□□□□□ -0.84
UBR4-214ENST00000486515 ROCK2O75116 1388 aaKnown RBP9.79□□□□□ -0.84
UBR4-214ENST00000486515 C8orf37Q96NL8 207 aa9.79□□□□□ -0.84
UBR4-214ENST00000486515 CARD11Q9BXL7 1154 aa9.79□□□□□ -0.84
UBR4-214ENST00000486515 NWD1Q149M9 1564 aa9.79□□□□□ -0.84
UBR4-214ENST00000486515 ADGRF5Q8IZF2 1346 aa9.79□□□□□ -0.84
UBR4-214ENST00000486515 XIRP1Q702N8 1843 aaKnown RBP9.77□□□□□ -0.84
UBR4-214ENST00000486515 IFT172Q9UG01 1749 aa9.77□□□□□ -0.85
UBR4-214ENST00000486515 ZFYVE9O95405 1425 aa9.77□□□□□ -0.85
UBR4-214ENST00000486515 MYOM2P54296 1465 aa9.77□□□□□ -0.85
UBR4-214ENST00000486515 BLMP54132 1417 aaPredicted RBP9.76□□□□□ -0.85
UBR4-214ENST00000486515 TMEM131LA2VDJ0 1609 aa9.76□□□□□ -0.85
UBR4-214ENST00000486515 SLC24A1O60721 1099 aa9.76□□□□□ -0.85
UBR4-214ENST00000486515 EIF4G2P78344 907 aaKnown RBP eCLIP9.76□□□□□ -0.85
UBR4-214ENST00000486515 SCAF11Q99590 1463 aaKnown RBP9.76□□□□□ -0.85
UBR4-214ENST00000486515 EIF3AQ14152 1382 aaKnown RBP9.75□□□□□ -0.85
UBR4-214ENST00000486515 PLEKHG1Q9ULL1 1385 aa9.75□□□□□ -0.85
UBR4-214ENST00000486515 PRAG1Q86YV5 1406 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 169.2 ms