RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 MTHFSP49914 203 aa11.78□□□□□ -0.52
CALD1-220ENST00000482470 GGNBP2Q9H3C7 697 aa11.78□□□□□ -0.52
CALD1-220ENST00000482470 RALGAPBQ86X10 1494 aa11.77□□□□□ -0.53
CALD1-220ENST00000482470 LRRIQ1Q96JM4 1722 aa11.77□□□□□ -0.53
CALD1-220ENST00000482470 FAM135AQ9P2D6 1515 aa11.77□□□□□ -0.53
CALD1-220ENST00000482470 PER1O15534 1290 aaPredicted RBP11.77□□□□□ -0.53
CALD1-220ENST00000482470 GCC2Q8IWJ2 1684 aa11.77□□□□□ -0.53
CALD1-220ENST00000482470 PRAG1Q86YV5 1406 aa11.76□□□□□ -0.53
CALD1-220ENST00000482470 PANK1Q8TE04 598 aa11.76□□□□□ -0.53
CALD1-220ENST00000482470 ITSN2Q9NZM3 1697 aa11.76□□□□□ -0.53
CALD1-220ENST00000482470 E9PSI1 815 aa11.76□□□□□ -0.53
CALD1-220ENST00000482470 C14orf37Q86TY3 774 aa11.76□□□□□ -0.53
CALD1-220ENST00000482470 CGNL1Q0VF96 1302 aa11.75□□□□□ -0.53
CALD1-220ENST00000482470 HDGFL2Q7Z4V5 671 aaPredicted RBP11.75□□□□□ -0.53
CALD1-220ENST00000482470 SPRYD3Q8NCJ5 442 aa11.75□□□□□ -0.53
CALD1-220ENST00000482470 ZBTB7CA1YPR0 619 aa11.75□□□□□ -0.53
CALD1-220ENST00000482470 EVC2Q86UK5 1308 aa11.75□□□□□ -0.53
CALD1-220ENST00000482470 ELL2O00472 640 aaPredicted RBP11.74□□□□□ -0.53
CALD1-220ENST00000482470 ADGRL2O95490 1459 aa11.74□□□□□ -0.53
CALD1-220ENST00000482470 TCP11L2Q8N4U5 519 aa11.74□□□□□ -0.53
CALD1-220ENST00000482470 STAC3Q96MF2 364 aa11.74□□□□□ -0.53
CALD1-220ENST00000482470 SMC4Q9NTJ3 1288 aa11.74□□□□□ -0.53
CALD1-220ENST00000482470 HSP90AA1P07900 732 aaKnown RBP11.73□□□□□ -0.53
CALD1-220ENST00000482470 PLCH2O75038 1416 aa11.73□□□□□ -0.53
CALD1-220ENST00000482470 FAM69CQ0P6D2 419 aa11.73□□□□□ -0.53
CALD1-220ENST00000482470 ITPRIPQ8IWB1 547 aa11.73□□□□□ -0.53
CALD1-220ENST00000482470 TERF2IPQ9NYB0 399 aa11.73□□□□□ -0.53
CALD1-220ENST00000482470 CENPQQ7L2Z9 268 aaPredicted RBP11.72□□□□□ -0.53
CALD1-220ENST00000482470 KDM5BQ9UGL1 1544 aa11.72□□□□□ -0.53
CALD1-220ENST00000482470 IL27Q8NEV9 243 aa11.72□□□□□ -0.53
CALD1-220ENST00000482470 MYH16Q9H6N6 1097 aa11.72□□□□□ -0.53
CALD1-220ENST00000482470 ABCC10Q5T3U5 1492 aa11.71□□□□□ -0.53
CALD1-220ENST00000482470 MBD5Q9P267 1494 aa11.71□□□□□ -0.53
CALD1-220ENST00000482470 AMER1Q5JTC6 1135 aaPredicted RBP11.71□□□□□ -0.54
CALD1-220ENST00000482470 SLKQ9H2G2 1235 aaPredicted RBP11.71□□□□□ -0.54
CALD1-220ENST00000482470 ADGRL1O94910 1474 aa11.7□□□□□ -0.54
CALD1-220ENST00000482470 RUNDC1Q96C34 613 aa11.7□□□□□ -0.54
CALD1-220ENST00000482470 FANCAO15360 1455 aa11.7□□□□□ -0.54
CALD1-220ENST00000482470 A2MP01023 1474 aa11.7□□□□□ -0.54
CALD1-220ENST00000482470 UHRF1BP1Q6BDS2 1440 aa11.69□□□□□ -0.54
CALD1-220ENST00000482470 PRAM1Q96QH2 718 aa11.69□□□□□ -0.54
CALD1-220ENST00000482470 PARD3Q8TEW0 1356 aa11.69□□□□□ -0.54
CALD1-220ENST00000482470 SHANK2Q9UPX8 1470 aa11.69□□□□□ -0.54
CALD1-220ENST00000482470 BECN1Q14457 450 aa11.69□□□□□ -0.54
CALD1-220ENST00000482470 DUSP27Q5VZP5 1158 aa11.68□□□□□ -0.54
CALD1-220ENST00000482470 FAM161AQ3B820 660 aa11.68□□□□□ -0.54
CALD1-220ENST00000482470 TSR2Q969E8 191 aaKnown RBP11.68□□□□□ -0.54
CALD1-220ENST00000482470 HMOX1P09601 288 aa11.67□□□□□ -0.54
CALD1-220ENST00000482470 SLFN5Q08AF3 891 aa11.67□□□□□ -0.54
CALD1-220ENST00000482470 MS4A1P11836 297 aa11.67□□□□□ -0.54
CALD1-220ENST00000482470 BACH2Q9BYV9 841 aa11.67□□□□□ -0.54
CALD1-220ENST00000482470 APBB1O00213 710 aa11.67□□□□□ -0.54
CALD1-220ENST00000482470 RIPK4P57078 832 aa11.67□□□□□ -0.54
CALD1-220ENST00000482470 RWDD1Q9H446 243 aaPredicted RBP11.67□□□□□ -0.54
CALD1-220ENST00000482470 IDI1Q13907 227 aa11.66□□□□□ -0.54
CALD1-220ENST00000482470 FBXO31Q5XUX0 539 aaPredicted RBP11.66□□□□□ -0.54
CALD1-220ENST00000482470 ABCA8O94911 1581 aa11.66□□□□□ -0.54
CALD1-220ENST00000482470 CARD14Q9BXL6 1004 aa11.66□□□□□ -0.54
CALD1-220ENST00000482470 CD109Q6YHK3 1445 aa11.65□□□□□ -0.54
CALD1-220ENST00000482470 NOS1P29475 1434 aa11.65□□□□□ -0.54
CALD1-220ENST00000482470 WWC1Q8IX03 1113 aa11.65□□□□□ -0.54
CALD1-220ENST00000482470 NSD3Q9BZ95 1437 aa11.65□□□□□ -0.54
CALD1-220ENST00000482470 CABP1Q9NZU7 370 aa11.65□□□□□ -0.55
CALD1-220ENST00000482470 DUOX2Q9NRD8 1548 aa11.64□□□□□ -0.55
CALD1-220ENST00000482470 ARHGEF12Q9NZN5 1544 aa11.64□□□□□ -0.55
CALD1-220ENST00000482470 PNNQ9H307 717 aaKnown RBP11.64□□□□□ -0.55
CALD1-220ENST00000482470 SPINK5Q9NQ38 1064 aaPredicted RBP11.64□□□□□ -0.55
CALD1-220ENST00000482470 SCAF11Q99590 1463 aaKnown RBP11.64□□□□□ -0.55
CALD1-220ENST00000482470 DIAPH1O60610 1272 aaKnown RBP11.64□□□□□ -0.55
CALD1-220ENST00000482470 PMFBP1Q8TBY8 1022 aa11.64□□□□□ -0.55
CALD1-220ENST00000482470 FBLN1P23142 703 aa11.64□□□□□ -0.55
CALD1-220ENST00000482470 MFAP1P55081 439 aaKnown RBP11.64□□□□□ -0.55
CALD1-220ENST00000482470 LRPPRCP42704 1394 aaKnown RBP11.63□□□□□ -0.55
CALD1-220ENST00000482470 ZKSCAN2Q63HK3 967 aa11.63□□□□□ -0.55
CALD1-220ENST00000482470 PLEKHH1Q9ULM0 1364 aa11.63□□□□□ -0.55
CALD1-220ENST00000482470 LMOD2Q6P5Q4 547 aa11.63□□□□□ -0.55
CALD1-220ENST00000482470 EXOSC9Q06265 439 aaKnown RBP11.62□□□□□ -0.55
CALD1-220ENST00000482470 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.62□□□□□ -0.55
CALD1-220ENST00000482470 ERCC6L2Q5T890 1561 aa11.62□□□□□ -0.55
CALD1-220ENST00000482470 ASXL2Q76L83 1435 aa11.62□□□□□ -0.55
CALD1-220ENST00000482470 PLA2R1Q13018 1463 aa11.62□□□□□ -0.55
CALD1-220ENST00000482470 IPO8O15397 1037 aaKnown RBP11.62□□□□□ -0.55
CALD1-220ENST00000482470 WAPLQ7Z5K2 1190 aa11.62□□□□□ -0.55
CALD1-220ENST00000482470 ABCC2Q92887 1545 aa11.62□□□□□ -0.55
CALD1-220ENST00000482470 SAMD9LQ8IVG5 1584 aa11.61□□□□□ -0.55
CALD1-220ENST00000482470 DZIP1LQ8IYY4 767 aaKnown RBP11.61□□□□□ -0.55
CALD1-220ENST00000482470 TXNDC2Q86VQ3 553 aa11.61□□□□□ -0.55
CALD1-220ENST00000482470 CDK19Q9BWU1 502 aa11.61□□□□□ -0.55
CALD1-220ENST00000482470 C14orf93Q9H972 538 aaKnown RBP11.6□□□□□ -0.55
CALD1-220ENST00000482470 HDGFP51858 240 aaKnown RBP11.6□□□□□ -0.55
CALD1-220ENST00000482470 UBE2Q2Q8WVN8 375 aa11.6□□□□□ -0.55
CALD1-220ENST00000482470 DMRT2Q9Y5R5 561 aa11.6□□□□□ -0.55
CALD1-220ENST00000482470 COL17A1Q9UMD9 1497 aaPredicted RBP11.59□□□□□ -0.55
CALD1-220ENST00000482470 TRHP20396 242 aaPredicted RBP11.59□□□□□ -0.55
CALD1-220ENST00000482470 BCORL1Q5H9F3 1711 aa11.59□□□□□ -0.55
CALD1-220ENST00000482470 ADGBQ8N7X0 1667 aa11.59□□□□□ -0.55
CALD1-220ENST00000482470 KDM5CP41229 1560 aa11.59□□□□□ -0.55
CALD1-220ENST00000482470 PRKAR2BP31323 418 aa11.58□□□□□ -0.56
CALD1-220ENST00000482470 SLC52A1Q9NWF4 448 aa11.58□□□□□ -0.56
CALD1-220ENST00000482470 NGEFQ8N5V2 710 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms