RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-222	ENST00000482096	ZC3H13	Q5T200	1668 aa	Known RBP	13.54	□□□□□ -0.24
UBE2F-222	ENST00000482096	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.54	□□□□□ -0.24
UBE2F-222	ENST00000482096	MROH1	Q8NDA8	1641 aa		13.53	□□□□□ -0.24
UBE2F-222	ENST00000482096	DUOX2	Q9NRD8	1548 aa		13.53	□□□□□ -0.24
UBE2F-222	ENST00000482096	ARHGAP31	Q2M1Z3	1444 aa		13.51	□□□□□ -0.25
UBE2F-222	ENST00000482096	KIF15	Q9NS87	1388 aa		13.51	□□□□□ -0.25
UBE2F-222	ENST00000482096	IQGAP1	P46940	1657 aa		13.5	□□□□□ -0.25
UBE2F-222	ENST00000482096	ALK	Q9UM73	1620 aa		13.5	□□□□□ -0.25
UBE2F-222	ENST00000482096	LRRC7	Q96NW7	1537 aa		13.5	□□□□□ -0.25
UBE2F-222	ENST00000482096	ABCC5	O15440	1437 aa		13.5	□□□□□ -0.25
UBE2F-222	ENST00000482096	LTK	P29376	864 aa		13.5	□□□□□ -0.25
UBE2F-222	ENST00000482096	RRP7BP	Q9NSQ0	103 aa		13.5	□□□□□ -0.25
UBE2F-222	ENST00000482096	TXNDC2	Q86VQ3	553 aa		13.49	□□□□□ -0.25
UBE2F-222	ENST00000482096	SCAF11	Q99590	1463 aa	Known RBP	13.48	□□□□□ -0.25
UBE2F-222	ENST00000482096	ARHGAP23	Q9P227	1491 aa		13.48	□□□□□ -0.25
UBE2F-222	ENST00000482096	ERBIN	Q96RT1	1412 aa		13.48	□□□□□ -0.25
UBE2F-222	ENST00000482096	MED1	Q15648	1581 aa	Predicted RBP	13.48	□□□□□ -0.25
UBE2F-222	ENST00000482096	SLIT1	O75093	1534 aa		13.47	□□□□□ -0.25
UBE2F-222	ENST00000482096	PRDM15	P57071	1507 aa	Predicted RBP	13.47	□□□□□ -0.25
UBE2F-222	ENST00000482096	CEP152	O94986	1710 aa		13.47	□□□□□ -0.25
UBE2F-222	ENST00000482096	UBR1	Q8IWV7	1749 aa		13.47	□□□□□ -0.25
UBE2F-222	ENST00000482096	CHRDL2	Q6WN34	429 aa		13.46	□□□□□ -0.25
UBE2F-222	ENST00000482096	KLHL34	Q8N239	644 aa		13.46	□□□□□ -0.25
UBE2F-222	ENST00000482096	EID1	Q9Y6B2	187 aa		13.46	□□□□□ -0.25
UBE2F-222	ENST00000482096	DAPK1	P53355	1430 aa		13.46	□□□□□ -0.26
UBE2F-222	ENST00000482096	STRCP1	A6NGW2	1772 aa		13.45	□□□□□ -0.26
UBE2F-222	ENST00000482096	PLEKHG5	O94827	1062 aa		13.45	□□□□□ -0.26
UBE2F-222	ENST00000482096	KANK1	Q14678	1352 aa		13.45	□□□□□ -0.26
UBE2F-222	ENST00000482096	PTPN23	Q9H3S7	1636 aa		13.44	□□□□□ -0.26
UBE2F-222	ENST00000482096	CREBZF	Q9NS37	354 aa		13.44	□□□□□ -0.26
UBE2F-222	ENST00000482096	SYNM	O15061	1565 aa		13.44	□□□□□ -0.26
UBE2F-222	ENST00000482096	TMEM2	Q9UHN6	1383 aa		13.44	□□□□□ -0.26
UBE2F-222	ENST00000482096	CFAP65	Q6ZU64	1925 aa	Known RBP	13.43	□□□□□ -0.26
UBE2F-222	ENST00000482096	FGD6	Q6ZV73	1430 aa		13.43	□□□□□ -0.26
UBE2F-222	ENST00000482096	ANKRD30A	Q9BXX3	1397 aa		13.43	□□□□□ -0.26
UBE2F-222	ENST00000482096	IDI1	Q13907	227 aa		13.42	□□□□□ -0.26
UBE2F-222	ENST00000482096	CHIC2	Q9UKJ5	165 aa		13.42	□□□□□ -0.26
UBE2F-222	ENST00000482096	CROCC2	H7BZ55	1655 aa		13.41	□□□□□ -0.26
UBE2F-222	ENST00000482096	LMTK2	Q8IWU2	1503 aa		13.41	□□□□□ -0.26
UBE2F-222	ENST00000482096	RTN4	Q9NQC3	1192 aa	Known RBP	13.4	□□□□□ -0.26
UBE2F-222	ENST00000482096	PIK3C2B	O00750	1634 aa		13.39	□□□□□ -0.27
UBE2F-222	ENST00000482096	CHADL	Q6NUI6	762 aa		13.39	□□□□□ -0.27
UBE2F-222	ENST00000482096	NOS1	P29475	1434 aa		13.39	□□□□□ -0.27
UBE2F-222	ENST00000482096	KCNA6	P17658	529 aa		13.38	□□□□□ -0.27
UBE2F-222	ENST00000482096	EFCAB6	Q5THR3	1501 aa		13.38	□□□□□ -0.27
UBE2F-222	ENST00000482096	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.37	□□□□□ -0.27
UBE2F-222	ENST00000482096	SLC52A1	Q9NWF4	448 aa		13.37	□□□□□ -0.27
UBE2F-222	ENST00000482096	FAM135B	Q49AJ0	1406 aa		13.37	□□□□□ -0.27
UBE2F-222	ENST00000482096	TMEM94	Q12767	1356 aa		13.36	□□□□□ -0.27
UBE2F-222	ENST00000482096	SLC26A8	Q96RN1	970 aa		13.36	□□□□□ -0.27
UBE2F-222	ENST00000482096	KDM5A	P29375	1690 aa	Known RBP	13.36	□□□□□ -0.27
UBE2F-222	ENST00000482096	ADGRL2	O95490	1459 aa		13.36	□□□□□ -0.27
UBE2F-222	ENST00000482096	TET3	O43151	1660 aa		13.35	□□□□□ -0.27
UBE2F-222	ENST00000482096	FXR2	P51116	673 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
UBE2F-222	ENST00000482096	PROSER2	Q86WR7	435 aa	Predicted RBP	13.34	□□□□□ -0.27
UBE2F-222	ENST00000482096	SPOCK2	Q92563	424 aa		13.34	□□□□□ -0.27
UBE2F-222	ENST00000482096	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.34	□□□□□ -0.27
UBE2F-222	ENST00000482096	RGS17	Q9UGC6	210 aa	Predicted RBP	13.34	□□□□□ -0.27
UBE2F-222	ENST00000482096	XIRP1	Q702N8	1843 aa	Known RBP	13.34	□□□□□ -0.27
UBE2F-222	ENST00000482096	PRKAR2A	P13861	404 aa	Known RBP	13.33	□□□□□ -0.28
UBE2F-222	ENST00000482096	PIP4P2	Q8N4L2	257 aa		13.33	□□□□□ -0.28
UBE2F-222	ENST00000482096	ANKRD50	Q9ULJ7	1429 aa		13.32	□□□□□ -0.28
UBE2F-222	ENST00000482096	FAM50A	Q14320	339 aa	Known RBP	13.32	□□□□□ -0.28
UBE2F-222	ENST00000482096	ADGRB3	O60242	1522 aa		13.32	□□□□□ -0.28
UBE2F-222	ENST00000482096	RPRD2	Q5VT52	1461 aa	Known RBP	13.31	□□□□□ -0.28
UBE2F-222	ENST00000482096	RBM33	Q96EV2	1170 aa	Known RBP	13.31	□□□□□ -0.28
UBE2F-222	ENST00000482096	MNX1	P50219	401 aa	Predicted RBP	13.3	□□□□□ -0.28
UBE2F-222	ENST00000482096	NKTR	P30414	1462 aa	Known RBP	13.29	□□□□□ -0.28
UBE2F-222	ENST00000482096	HDGF	P51858	240 aa	Known RBP	13.29	□□□□□ -0.28
UBE2F-222	ENST00000482096	BCAN	Q96GW7	911 aa		13.29	□□□□□ -0.28
UBE2F-222	ENST00000482096	PLEKHG1	Q9ULL1	1385 aa		13.29	□□□□□ -0.28
UBE2F-222	ENST00000482096	ZFYVE9	O95405	1425 aa		13.29	□□□□□ -0.28
UBE2F-222	ENST00000482096	NWD1	Q149M9	1564 aa		13.28	□□□□□ -0.28
UBE2F-222	ENST00000482096	MSH6	P52701	1360 aa		13.27	□□□□□ -0.29
UBE2F-222	ENST00000482096	RIMS2	Q9UQ26	1411 aa		13.27	□□□□□ -0.29
UBE2F-222	ENST00000482096	PPP1R15A	O75807	674 aa	Predicted RBP	13.26	□□□□□ -0.29
UBE2F-222	ENST00000482096	SLAIN2	Q9P270	581 aa		13.26	□□□□□ -0.29
UBE2F-222	ENST00000482096	TBX22	Q9Y458	520 aa		13.26	□□□□□ -0.29
UBE2F-222	ENST00000482096	POTEA	Q6S8J7	498 aa		13.25	□□□□□ -0.29
UBE2F-222	ENST00000482096	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
UBE2F-222	ENST00000482096	ROBO1	Q9Y6N7	1651 aa		13.24	□□□□□ -0.29
UBE2F-222	ENST00000482096	NCOA3	Q9Y6Q9	1424 aa		13.23	□□□□□ -0.29
UBE2F-222	ENST00000482096	CHGA	P10645	457 aa	Known RBP	13.23	□□□□□ -0.29
UBE2F-222	ENST00000482096	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.23	□□□□□ -0.29
UBE2F-222	ENST00000482096	TMEM131L	A2VDJ0	1609 aa		13.23	□□□□□ -0.29
UBE2F-222	ENST00000482096	ROCK1	Q13464	1354 aa		13.22	□□□□□ -0.29
UBE2F-222	ENST00000482096	UNC13B	O14795	1591 aa		13.21	□□□□□ -0.29
UBE2F-222	ENST00000482096	ADAMTS13	Q76LX8	1427 aa		13.21	□□□□□ -0.3
UBE2F-222	ENST00000482096	PIK3R4	Q99570	1358 aa		13.2	□□□□□ -0.3
UBE2F-222	ENST00000482096	JCAD	Q9P266	1359 aa		13.2	□□□□□ -0.3
UBE2F-222	ENST00000482096	GCC2	Q8IWJ2	1684 aa		13.2	□□□□□ -0.3
UBE2F-222	ENST00000482096	CHD2	O14647	1828 aa	Known RBP	13.2	□□□□□ -0.3
UBE2F-222	ENST00000482096	NUBP1	P53384	320 aa		13.19	□□□□□ -0.3
UBE2F-222	ENST00000482096	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.19	□□□□□ -0.3
UBE2F-222	ENST00000482096	MYO5B	Q9ULV0	1848 aa		13.18	□□□□□ -0.3
UBE2F-222	ENST00000482096	C14orf37	Q86TY3	774 aa		13.18	□□□□□ -0.3
UBE2F-222	ENST00000482096	CADPS2	Q86UW7	1296 aa		13.18	□□□□□ -0.3
UBE2F-222	ENST00000482096	C19orf44	Q9H6X5	657 aa		13.18	□□□□□ -0.3
UBE2F-222	ENST00000482096	NUP155	O75694	1391 aa		13.18	□□□□□ -0.3
UBE2F-222	ENST00000482096		E9PCH4	1651 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms